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The map label for this gene is nusG

Identifier: 54020638

GI number: 54020638

Start: 831245

End: 831817

Strand: Reverse

Name: nusG

Synonym: mhp657

Alternate gene names: 54020638

Gene position: 831817-831245 (Counterclockwise)

Preceding gene: 54020639

Following gene: 54020637

Centisome position: 93.17

GC content: 32.29

Gene sequence:

>573_bases
ATGAAAATTTACAAGTGGTATATGATTTCAACTATTTCTTCAAAAGAGGATACTGCCATTAGTTTGCTCAAAAATCGGAT
AAAATACGAAAATTTAGAGGAACATTTCCAAGAAATAACGAAATTTGATGTCCCTTATTATGAAGAAAATCCTAATAAAC
CAGGAGAAAAAAAGCTGAAATACCGAAATTTATATAAAGGATATTTTTTCATTAAGATGAATATGGTTGATAAAGCTTGA
TTTGTGGTGCGTAATACCCAATATGTAACAGGACTTGTCGGGTCTCATGGTAGAGGAACAAAACCAACACCAATTTCACC
GCGTCAATTTGAAAGAATGAGAAAAAAATGAGATCAACAAATTCTTAATTTTCAACAAACAAACGATGGCACAATTAATT
GAGAAATCGGTGATTGAGTGAAAGTAACTCATGGTCCTTTTTCTGATGATTTTGGGAAAATCATCGAGATGAATGAAACT
AAAACCCTAATAACCGTCGAGCTTGAAAGTGTTTTTGGTCGCCGAACTCCAGCAACTTTCGAGTATAAAAATCTAAAAAA
AGTTGATAAATAG

Upstream 100 bases:

>100_bases
CCACAATTTTTATGTTTGTTTTTTTTGCAGTTACGGTTATTGCGGCACTTATTTGGAATCAGGCTGGCGTCGGAATTTAA
AAAAAAAGGTTAGTTTTGTT

Downstream 100 bases:

>100_bases
CTAAAATATATTGAATTATTTTGATAAAAAAAACCAGAAATTTTCAAAATTAAGAAATTTCTGGTTTTTTATTGCTTTAA
TTGTATTATTATTTAGTTAA

Product: transcription antitermination protein NusG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MKIYKWYMISTISSKEDTAISLLKNRIKYENLEEHFQEITKFDVPYYEENPNKPGEKKLKYRNLYKGYFFIKMNMVDKAW
FVVRNTQYVTGLVGSHGRGTKPTPISPRQFERMRKKWDQQILNFQQTNDGTINWEIGDWVKVTHGPFSDDFGKIIEMNET
KTLITVELESVFGRRTPATFEYKNLKKVDK

Sequences:

>Translated_190_residues
MKIYKWYMISTISSKEDTAISLLKNRIKYENLEEHFQEITKFDVPYYEENPNKPGEKKLKYRNLYKGYFFIKMNMVDKA*
FVVRNTQYVTGLVGSHGRGTKPTPISPRQFERMRKK*DQQILNFQQTNDGTIN*EIGD*VKVTHGPFSDDFGKIIEMNET
KTLITVELESVFGRRTPATFEYKNLKKVDK
>Mature_190_residues
MKIYKWYMISTISSKEDTAISLLKNRIKYENLEEHFQEITKFDVPYYEENPNKPGEKKLKYRNLYKGYFFIKMNMVDKA*
FVVRNTQYVTGLVGSHGRGTKPTPISPRQFERMRKK*DQQILNFQQTNDGTIN*EIGD*VKVTHGPFSDDFGKIIEMNET
KTLITVELESVFGRRTPATFEYKNLKKVDK

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=182, Percent_Identity=29.1208791208791, Blast_Score=82, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 21811; Mature: 21811

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIYKWYMISTISSKEDTAISLLKNRIKYENLEEHFQEITKFDVPYYEENPNKPGEKKLK
CEEEEEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
YRNLYKGYFFIKMNMVDKAFVVRNTQYVTGLVGSHGRGTKPTPISPRQFERMRKKDQQIL
HHHHCCEEEEEEECCCCCEEEEECCHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH
NFQQTNDGTINEIGDVKVTHGPFSDDFGKIIEMNETKTLITVELESVFGRRTPATFEYKN
CCCCCCCCCCCCCCCEEEECCCCCCCCHHEEEECCCEEEEEEEEHHHHCCCCCCEECCCC
LKKVDK
HHCCCC
>Mature Secondary Structure
MKIYKWYMISTISSKEDTAISLLKNRIKYENLEEHFQEITKFDVPYYEENPNKPGEKKLK
CEEEEEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
YRNLYKGYFFIKMNMVDKAFVVRNTQYVTGLVGSHGRGTKPTPISPRQFERMRKKDQQIL
HHHHCCEEEEEEECCCCCEEEEECCHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH
NFQQTNDGTINEIGDVKVTHGPFSDDFGKIIEMNETKTLITVELESVFGRRTPATFEYKN
CCCCCCCCCCCCCCCEEEECCCCCCCCHHEEEECCCEEEEEEEEHHHHCCCCCCEECCCC
LKKVDK
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]