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The map label for this gene is atpB

Identifier: 54020000

GI number: 54020000

Start: 60481

End: 61209

Strand: Direct

Name: atpB

Synonym: mhp049

Alternate gene names: 54020000

Gene position: 60481-61209 (Clockwise)

Preceding gene: 54019999

Following gene: 54020001

Centisome position: 6.77

GC content: 27.02

Gene sequence:

>729_bases
ATGGATTTTTTTCGCGACTGAAATCAACCGCAATTATTTACCCTTTTTATTCTAGTATTTCTTGTAATAATTTTATCAAT
TATTATTTTTTTTCATATAAAAAAAGCAAAAATTGATAAATCTCCATCAGCTGTTGTTTTGTTTGCTGAATCTTACCTAA
TTTTTATTGATGATTTAGTTGAAACTGCTGGAGAAGGTTATATTAACAAAGTAAAACCATACATTTTTTCACTTTTTACC
TTTTTTTTATTAGGAAATTTATTATCGCTTGTTGGCTTAGAGCCAATTTCAACATCAATTTCGGTTACTTTAAGTTTGGC
CTTTGTTAGTTGGTTTGGAATTTTTGTAGTTGGCGCTATTTATTCAAGGTGAAAATATTTGTCTGAATTTGCAAAAAATC
CTTTAAAAATAATAGGGATTCCAGCGCCGTTAATTTCATTATCGTTTCGTATGTATGGAAATTTAATTTCTGGATCAGTT
TTATTATTAATAATTTATTCAGGCGTCCAGTGAATTTATCAAAAAATACCATTAGGGACTTTTGGTAATTTTAATTTGCC
GATTGTCTTGATTTTTCCACCTTTTCTTATTTATTTTGACATTGTTGGCTCGTTAATTCAATCTTTTATTTTTGTAATTT
TAACAACTTCATATTGAGGTATGGAGGTAAATCAGGATGAAGCAAGATTAAAAATTAATAAAAAAAGACTAAATTTACAG
AAAATTTAG

Upstream 100 bases:

>100_bases
TTTTTTCTTTTATTTTTGGCTATACAATTTTCCCGGTTTGTGCTATAATAATAAATTCTATAAATATAAAAGTTAGTCAA
AAACAAAAAAAGGAGAAATA

Downstream 100 bases:

>100_bases
ACTTAAATAACTTAAAAAAGGAAAAAAATGAATTCTATTGTTAATTTTTCGCAACAACTTATTCAAAATTTTCAGGAAGT
AAGTCAAAAAACTGCAGCAG

Product: F0F1 ATP synthase subunit A

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F0 sector subunit a; F-ATPase subunit 6 [H]

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MDFFRDWNQPQLFTLFILVFLVIILSIIIFFHIKKAKIDKSPSAVVLFAESYLIFIDDLVETAGEGYINKVKPYIFSLFT
FFLLGNLLSLVGLEPISTSISVTLSLAFVSWFGIFVVGAIYSRWKYLSEFAKNPLKIIGIPAPLISLSFRMYGNLISGSV
LLLIIYSGVQWIYQKIPLGTFGNFNLPIVLIFPPFLIYFDIVGSLIQSFIFVILTTSYWGMEVNQDEARLKINKKRLNLQ
KI

Sequences:

>Translated_242_residues
MDFFRD*NQPQLFTLFILVFLVIILSIIIFFHIKKAKIDKSPSAVVLFAESYLIFIDDLVETAGEGYINKVKPYIFSLFT
FFLLGNLLSLVGLEPISTSISVTLSLAFVSWFGIFVVGAIYSR*KYLSEFAKNPLKIIGIPAPLISLSFRMYGNLISGSV
LLLIIYSGVQ*IYQKIPLGTFGNFNLPIVLIFPPFLIYFDIVGSLIQSFIFVILTTSY*GMEVNQDEARLKINKKRLNLQ
KI
>Mature_242_residues
MDFFRD*NQPQLFTLFILVFLVIILSIIIFFHIKKAKIDKSPSAVVLFAESYLIFIDDLVETAGEGYINKVKPYIFSLFT
FFLLGNLLSLVGLEPISTSISVTLSLAFVSWFGIFVVGAIYSR*KYLSEFAKNPLKIIGIPAPLISLSFRMYGNLISGSV
LLLIIYSGVQ*IYQKIPLGTFGNFNLPIVLIFPPFLIYFDIVGSLIQSFIFVILTTSY*GMEVNQDEARLKINKKRLNLQ
KI

Specific function: Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane [H]

COG id: COG0356

COG function: function code C; F0F1-type ATP synthase, subunit a

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase A chain family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000568
- InterPro:   IPR023011 [H]

Pfam domain/function: PF00119 ATP-synt_A [H]

EC number: 3.6.3.14

Molecular weight: Translated: 26822; Mature: 26822

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFFRDNQPQLFTLFILVFLVIILSIIIFFHIKKAKIDKSPSAVVLFAESYLIFIDDLVE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHH
TAGEGYINKVKPYIFSLFTFFLLGNLLSLVGLEPISTSISVTLSLAFVSWFGIFVVGAIY
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
SRKYLSEFAKNPLKIIGIPAPLISLSFRMYGNLISGSVLLLIIYSGVQIYQKIPLGTFGN
HHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
FNLPIVLIFPPFLIYFDIVGSLIQSFIFVILTTSYGMEVNQDEARLKINKKRLNLQKI
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHEEEHHHHCCCCCC
>Mature Secondary Structure
MDFFRDNQPQLFTLFILVFLVIILSIIIFFHIKKAKIDKSPSAVVLFAESYLIFIDDLVE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHH
TAGEGYINKVKPYIFSLFTFFLLGNLLSLVGLEPISTSISVTLSLAFVSWFGIFVVGAIY
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
SRKYLSEFAKNPLKIIGIPAPLISLSFRMYGNLISGSVLLLIIYSGVQIYQKIPLGTFGN
HHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
FNLPIVLIFPPFLIYFDIVGSLIQSFIFVILTTSYGMEVNQDEARLKINKKRLNLQKI
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHEEEHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1386735; 12949158 [H]