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The map label for this gene is spsB [H]

Identifier: 54019987

GI number: 54019987

Start: 34028

End: 34510

Strand: Direct

Name: spsB [H]

Synonym: mhp028

Alternate gene names: 54019987

Gene position: 34028-34510 (Clockwise)

Preceding gene: 54019986

Following gene: 54019988

Centisome position: 3.81

GC content: 24.84

Gene sequence:

>483_bases
ATGTTAAAATCTAAAAACTTAAGTAACAAATTTCTAAAATTTATTAAGAAAAATCGCTTAATTATTGGTATTATTTTTAT
TTTTACTTGTGTTTTAATAGTTTCTGCGCTTTTTATCTTTGTCTATCAATTAATAAATGTCGAAGGAAACTCGATGTTTC
CAACCTTAAAAAATGGCCAACAAATTTTTATTAACAATGTCAAAAAACCTCAGCGAAATGATGTGGTAGTTTTCAAATAT
AAAGATAAAATTTTAATTAAAAGATTGGTTGGAATTCCTGGTGATAAATTAGAAGTTACTGAAAATTCTATTTTAATAAA
TGATGAATTAGTTGCTAATTTTACTGATTTAGGTTTTTGGAAATTTAACGGAGTTATTCCCGAAGGTAAATTTTTTGCAC
TTGGTGATAATATAAATTTTAGTAATGATAGCCGTACTTTTGGATTTTTTGATTTAAATGATATTAAAGGTGTTTGGGCC
TAA

Upstream 100 bases:

>100_bases
AATTAGTATGTTTGCCTCAAATTCAACACTTTTTATTATAAAATCAAAAATTAAAATTGTTTTTTTATGATAAAATATCA
AAGAAATAAATTTAATAACT

Downstream 100 bases:

>100_bases
AAGCTGTTTTTGTGGTTAAAAATTTAAATTTTTTGATTTTTAAGAAAATTTTAGTGTATAATCTGTTATTTATATAAAAA
ATAATAAAGAACTTTTTGGG

Product: signal peptidase I

Products: NA

Alternate protein names: SPase IB; Leader peptidase IB [H]

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MLKSKNLSNKFLKFIKKNRLIIGIIFIFTCVLIVSALFIFVYQLINVEGNSMFPTLKNGQQIFINNVKKPQRNDVVVFKY
KDKILIKRLVGIPGDKLEVTENSILINDELVANFTDLGFWKFNGVIPEGKFFALGDNINFSNDSRTFGFFDLNDIKGVWA

Sequences:

>Translated_160_residues
MLKSKNLSNKFLKFIKKNRLIIGIIFIFTCVLIVSALFIFVYQLINVEGNSMFPTLKNGQQIFINNVKKPQRNDVVVFKY
KDKILIKRLVGIPGDKLEVTENSILINDELVANFTDLGFWKFNGVIPEGKFFALGDNINFSNDSRTFGFFDLNDIKGVWA
>Mature_160_residues
MLKSKNLSNKFLKFIKKNRLIIGIIFIFTCVLIVSALFIFVYQLINVEGNSMFPTLKNGQQIFINNVKKPQRNDVVVFKY
KDKILIKRLVGIPGDKLEVTENSILINDELVANFTDLGFWKFNGVIPEGKFFALGDNINFSNDSRTFGFFDLNDIKGVWA

Specific function: Essential for cell viability [H]

COG id: COG0681

COG function: function code U; Signal peptidase I

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein (Potential) [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S26 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000223
- InterPro:   IPR019758
- InterPro:   IPR019757
- InterPro:   IPR019756
- InterPro:   IPR019759
- InterPro:   IPR015927
- InterPro:   IPR011056 [H]

Pfam domain/function: PF00717 Peptidase_S24 [H]

EC number: =3.4.21.89 [H]

Molecular weight: Translated: 18334; Mature: 18334

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: PS00501 SPASE_I_1 ; PS00760 SPASE_I_2 ; PS00761 SPASE_I_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKSKNLSNKFLKFIKKNRLIIGIIFIFTCVLIVSALFIFVYQLINVEGNSMFPTLKNGQ
CCCCCCCHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
QIFINNVKKPQRNDVVVFKYKDKILIKRLVGIPGDKLEVTENSILINDELVANFTDLGFW
EEEEECCCCCCCCCEEEEEECCHHHHHHHHCCCCCEEEEECCEEEECCHHHHCHHHCCEE
KFNGVIPEGKFFALGDNINFSNDSRTFGFFDLNDIKGVWA
EECCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCC
>Mature Secondary Structure
MLKSKNLSNKFLKFIKKNRLIIGIIFIFTCVLIVSALFIFVYQLINVEGNSMFPTLKNGQ
CCCCCCCHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
QIFINNVKKPQRNDVVVFKYKDKILIKRLVGIPGDKLEVTENSILINDELVANFTDLGFW
EEEEECCCCCCCCCEEEEEECCHHHHHHHHCCCCCEEEEECCEEEECCHHHHCHHHCCEE
KFNGVIPEGKFFALGDNINFSNDSRTFGFFDLNDIKGVWA
EECCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA