| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53723355
Identifier: 53723355
GI number: 53723355
Start: 3153366
End: 3154073
Strand: Reverse
Name: 53723355
Synonym: BPSS2338
Alternate gene names: NA
Gene position: 3154073-3153366 (Counterclockwise)
Preceding gene: 53723356
Following gene: 53723354
Centisome position: 99.4
GC content: 77.68
Gene sequence:
>708_bases ATGGCTGGTTCCGGCCGTCCGGCCGCACCCGTGATCGCCGTCGCCGGCATGGCGTTCGAGGCGCGGATCGCGCGCGGCGC GGGCGTCGAGGCGGTCTACGCGGCGCGCGCGGACCGGCTCGAGCGCGCGCTTGCCGAGGCGGCCCGCGCGCACGGCTGCG CGGGCATCGTCAGCTTCGGCACGGCGGGCGGGCTCGCGCCCGATCTCGCGCCGGGCGCGTTGATCGTCGCCGATTCCGTC GACGGGCCGTTCGGCGTGCTCGACACCGATGCCGGATGGAGCGCGCGCATCGTCGCCGCGCTCGCCGGCACGCCGGCCGC GTCGCGCGCGCGGCGCGGCAAGGTTGCGGCGGTTGGCGCGCCGGTCACCGGCGCGCACGAGAAGGACGCGTTGCATCGGG CGAAGGGCGCGCTCGCGGTCGACATGGAATCGCATATCGCCGGCGCGTTCGCGGCGGCGCGCGGCGTGCCGTTCGCGGTG TGCCGCGCGATCGTCGATCCGGCGTGGCGCACGCTGCCGAAGGCCGCGACGGCGGGCCTGCGCGACGACGGCAGCACCGC GATCCTGCCGATCCTGCGCGAGCTCGCGAAGCAGCCGTCGCAGCTCGGCGCACTGCTGCAAGTCGCGGGCGACGCGCGCG CCGCCCGCGCGACGCTCGTGCAGGCGCGGCAGGCGTTCGAGCGCGCGGGGGCGTGGCGAATCGGCTGA
Upstream 100 bases:
>100_bases CCACGGCTACCGCAAGTTCTTCCCGCTGTGGGCGCTCGCCCGCTATCGCAACCTGAAGCGCGCGAACGCGACGCGCGTGA CGGTCGGGATGTAACGGCCG
Downstream 100 bases:
>100_bases ACGCGGGCGGGCGCTTCGCGATCGGTATCGGCGGCCCTATTTCGCCGGCGCCGGTGCCGGCCCGGGAGCGCACGGCGATC GCTTTCGGTTGCGGCCGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: Nucleoside Phosphorylase
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MAGSGRPAAPVIAVAGMAFEARIARGAGVEAVYAARADRLERALAEAARAHGCAGIVSFGTAGGLAPDLAPGALIVADSV DGPFGVLDTDAGWSARIVAALAGTPAASRARRGKVAAVGAPVTGAHEKDALHRAKGALAVDMESHIAGAFAAARGVPFAV CRAIVDPAWRTLPKAATAGLRDDGSTAILPILRELAKQPSQLGALLQVAGDARAARATLVQARQAFERAGAWRIG
Sequences:
>Translated_235_residues MAGSGRPAAPVIAVAGMAFEARIARGAGVEAVYAARADRLERALAEAARAHGCAGIVSFGTAGGLAPDLAPGALIVADSV DGPFGVLDTDAGWSARIVAALAGTPAASRARRGKVAAVGAPVTGAHEKDALHRAKGALAVDMESHIAGAFAAARGVPFAV CRAIVDPAWRTLPKAATAGLRDDGSTAILPILRELAKQPSQLGALLQVAGDARAARATLVQARQAFERAGAWRIG >Mature_234_residues AGSGRPAAPVIAVAGMAFEARIARGAGVEAVYAARADRLERALAEAARAHGCAGIVSFGTAGGLAPDLAPGALIVADSVD GPFGVLDTDAGWSARIVAALAGTPAASRARRGKVAAVGAPVTGAHEKDALHRAKGALAVDMESHIAGAFAAARGVPFAVC RAIVDPAWRTLPKAATAGLRDDGSTAILPILRELAKQPSQLGALLQVAGDARAARATLVQARQAFERAGAWRIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23545; Mature: 23414
Theoretical pI: Translated: 10.86; Mature: 10.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGSGRPAAPVIAVAGMAFEARIARGAGVEAVYAARADRLERALAEAARAHGCAGIVSFG CCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHC TAGGLAPDLAPGALIVADSVDGPFGVLDTDAGWSARIVAALAGTPAASRARRGKVAAVGA CCCCCCCCCCCCEEEEEECCCCCCCEEECCCCCHHHHHHHHHCCCHHHHHHCCCEEEECC PVTGAHEKDALHRAKGALAVDMESHIAGAFAAARGVPFAVCRAIVDPAWRTLPKAATAGL CCCCCCHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC RDDGSTAILPILRELAKQPSQLGALLQVAGDARAARATLVQARQAFERAGAWRIG CCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AGSGRPAAPVIAVAGMAFEARIARGAGVEAVYAARADRLERALAEAARAHGCAGIVSFG CCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHC TAGGLAPDLAPGALIVADSVDGPFGVLDTDAGWSARIVAALAGTPAASRARRGKVAAVGA CCCCCCCCCCCCEEEEEECCCCCCCEEECCCCCHHHHHHHHHCCCHHHHHHCCCEEEECC PVTGAHEKDALHRAKGALAVDMESHIAGAFAAARGVPFAVCRAIVDPAWRTLPKAATAGL CCCCCCHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC RDDGSTAILPILRELAKQPSQLGALLQVAGDARAARATLVQARQAFERAGAWRIG CCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA