| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is glnP
Identifier: 53723353
GI number: 53723353
Start: 3151446
End: 3152102
Strand: Reverse
Name: glnP
Synonym: BPSS2336
Alternate gene names: 53723353
Gene position: 3152102-3151446 (Counterclockwise)
Preceding gene: 53723354
Following gene: 53723352
Centisome position: 99.34
GC content: 64.54
Gene sequence:
>657_bases GTGCAATTCGATTGGTCAGCGATATGGGCGGCGCTGCCGGACTTGATGGACGGCGTGCGGCTCACCGTTTTCATCGCATT CTTCGGGCTGGCGGGCGGTTTTCTCGTCGGCATGATCGCGGGCATGTTTCGCGCGTACGGCCCTGCCGTGCTGAACGTGC TCGCTCAGGTCTACATCGAGCTGATCCGCGGCACGCCGATCGTCGTGCAGGTGATGTTTCTCTATTTCGCGCTGCCGCTG CTCGCGCACGTCCGCATCGACGGCCTGAGCGCGGCGGTCGTCGCGATCACGCTGAACTCCGGCGCGTATCTCGCCGAGGT CGTGCGCGGCGCGCTGCTGTCGATTCCCAAGGGATTGACGGAAGCCGGGCTCGCGATGGGGCTGTCGATGCCGCGCGTGC TCGTGAAGATCGTCGGGCCGCTCGCGTTCCGGCGGCTCATTGCGCCGCTCGGCAACCAGTGCATCGTCAGCCTGAAGGAC ACGTCGCTGTTCATCGTGATCGGCGTCGGCGAGCTCACGCGCAAGGGCCAGGAGATCATCGCCGGCAATTTCCAGGCGGT CGAGATCTGGACCGCCGTCGCCGCGATCTATCTCGTGCTCACCGGCGTGATGACGCTCACGCTTCGCTTCGTCGAGAAAA GGATGCGCATCTTATGA
Upstream 100 bases:
>100_bases AAGAAGTGGTTCGGCTCCGAGCCGCCGAAGTCTTGAGCGACGCATCGGGGTGGCGCGGCACGCGATGCCGCGCCGATCGG AACGCCATCGGGAGCTGAAT
Downstream 100 bases:
>100_bases GCATGGTCGAATTCCGCAACGTGTCGAAGAGCTTCGGTCACGTGCCGGTGCTGAAGGACATCGACCTGCGCATCGACGCG GGCGAGGTGGTGGTGGTGGT
Product: glutamine ABC transporter permease protein
Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MQFDWSAIWAALPDLMDGVRLTVFIAFFGLAGGFLVGMIAGMFRAYGPAVLNVLAQVYIELIRGTPIVVQVMFLYFALPL LAHVRIDGLSAAVVAITLNSGAYLAEVVRGALLSIPKGLTEAGLAMGLSMPRVLVKIVGPLAFRRLIAPLGNQCIVSLKD TSLFIVIGVGELTRKGQEIIAGNFQAVEIWTAVAAIYLVLTGVMTLTLRFVEKRMRIL
Sequences:
>Translated_218_residues MQFDWSAIWAALPDLMDGVRLTVFIAFFGLAGGFLVGMIAGMFRAYGPAVLNVLAQVYIELIRGTPIVVQVMFLYFALPL LAHVRIDGLSAAVVAITLNSGAYLAEVVRGALLSIPKGLTEAGLAMGLSMPRVLVKIVGPLAFRRLIAPLGNQCIVSLKD TSLFIVIGVGELTRKGQEIIAGNFQAVEIWTAVAAIYLVLTGVMTLTLRFVEKRMRIL >Mature_218_residues MQFDWSAIWAALPDLMDGVRLTVFIAFFGLAGGFLVGMIAGMFRAYGPAVLNVLAQVYIELIRGTPIVVQVMFLYFALPL LAHVRIDGLSAAVVAITLNSGAYLAEVVRGALLSIPKGLTEAGLAMGLSMPRVLVKIVGPLAFRRLIAPLGNQCIVSLKD TSLFIVIGVGELTRKGQEIIAGNFQAVEIWTAVAAIYLVLTGVMTLTLRFVEKRMRIL
Specific function: Part of the binding-protein-dependent transport system for glutamine; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787030, Length=219, Percent_Identity=60.2739726027397, Blast_Score=266, Evalue=7e-73, Organism=Escherichia coli, GI1788226, Length=206, Percent_Identity=31.0679611650485, Blast_Score=108, Evalue=3e-25, Organism=Escherichia coli, GI1787086, Length=212, Percent_Identity=29.7169811320755, Blast_Score=94, Evalue=5e-21, Organism=Escherichia coli, GI1786873, Length=221, Percent_Identity=28.5067873303167, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1786874, Length=213, Percent_Identity=24.8826291079812, Blast_Score=87, Evalue=9e-19, Organism=Escherichia coli, GI87082239, Length=204, Percent_Identity=31.8627450980392, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1788645, Length=212, Percent_Identity=30.188679245283, Blast_Score=83, Evalue=1e-17, Organism=Escherichia coli, GI1787087, Length=179, Percent_Identity=29.608938547486, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1788646, Length=170, Percent_Identity=28.2352941176471, Blast_Score=75, Evalue=2e-15, Organism=Escherichia coli, GI48994930, Length=169, Percent_Identity=26.6272189349112, Blast_Score=66, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 23493; Mature: 23493
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFDWSAIWAALPDLMDGVRLTVFIAFFGLAGGFLVGMIAGMFRAYGPAVLNVLAQVYIE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIRGTPIVVQVMFLYFALPLLAHVRIDGLSAAVVAITLNSGAYLAEVVRGALLSIPKGLT HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHH EAGLAMGLSMPRVLVKIVGPLAFRRLIAPLGNQCIVSLKDTSLFIVIGVGELTRKGQEII HHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEECHHHHHCCHHHH AGNFQAVEIWTAVAAIYLVLTGVMTLTLRFVEKRMRIL HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQFDWSAIWAALPDLMDGVRLTVFIAFFGLAGGFLVGMIAGMFRAYGPAVLNVLAQVYIE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIRGTPIVVQVMFLYFALPLLAHVRIDGLSAAVVAITLNSGAYLAEVVRGALLSIPKGLT HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHH EAGLAMGLSMPRVLVKIVGPLAFRRLIAPLGNQCIVSLKDTSLFIVIGVGELTRKGQEII HHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEECHHHHHCCHHHH AGNFQAVEIWTAVAAIYLVLTGVMTLTLRFVEKRMRIL HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamine [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]