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The map label for this gene is yodT [H]

Identifier: 53723350

GI number: 53723350

Start: 3148295

End: 3149641

Strand: Reverse

Name: yodT [H]

Synonym: BPSS2333

Alternate gene names: 53723350

Gene position: 3149641-3148295 (Counterclockwise)

Preceding gene: 53723351

Following gene: 53723349

Centisome position: 99.26

GC content: 69.86

Gene sequence:

>1347_bases
ATGACCACCGTATTTCACCGCGCGCCGCGCGCGAGCCTGCCGATCGCGGTTGCGGGCGACGGCATCGAGATCGTCGATTC
GACCGGCACGCGCTACATCGATGCGTGCGGCGGCGCCGCGGTGTCGTGCCTCGGGCACAGCAATCAGCGCGTGATCGACG
CGATCAAGCGGCAGGCGCAGCAACTGCCGTACGCGCACACGTCGTTCTTCACGACGCAGCCGGCCGAGGCGCTCGCGGAC
CGGCTCGTTGCCGCCGCGCCCGCGGGGCTCGAGCACGTGTACTTCGTGTCGGGCGGATCGGAGGCGATCGAGGCCGCGCT
GAAGCTCGCGCGCCAGTATTTCGTCGAGAAGGGCGAGCCCGCGCGCCGGCATTTCATCGCGCGCCGGCAGAGCTATCACG
GCAACACGCTCGGCGCGCTCGCGATCGGCGGCAATGCATGGCGGCGCGAACCGTTCGTGCCGCTTCTGATCGAAGCGCAC
CACGTGAGCCCGTGCTACGCGTACCGCGAGCAGCGCGCGGACGAAACCGAAGAAGCGTTCGCGCAGCGCCTGGCCGACGA
GCTCGAAAGCCGGATTCTCGCGCTCGGGCCGGATACGGTTGCGGCATTTGTCGCGGAGACGGTCGTCGGCGCGACGGCGG
GCGCGGTGCCGCCCGTGCGCGAGTATTTCCGCAAGATCCGCGCGGTGTGCGACAAGTACGGCGTGCTGCTGATTCTCGAC
GAGATCATGTCGGGGATGGGCCGCACCGGCTATCTGTTCGCGTGCGAGGAAGACGGCGTCGCGCCCGATCTCCTGACGAT
CGCGAAGGGGCTCGGCGCCGGCTATCAGCCGATCGGCGCGACGCTCGTGAGCGATGCGATCTACCGGACGATCGTCGACG
GCTCGGGCTTCTTTCAGCACGGCCATACGTACGTCGGCCACGCGAGCGCGTGCGCGGCCGCGCTCGAGGTGCAGCGCGTG
ATCGACGAGGAGCGGCTGCTCGAGAACGTGAAGGCGCGCGGCGAGCAATTGCGCGCATCGCTCGCCGTGCGCTCGGCCGA
GCAGCCGCACATCGGCGACGTGCGCGGCCGCGGGCTCTTCGTCGGCGTCGAGCTCGTGCGCGATCGCGACACGAAGGCGC
CGTTCGATCCGCGGCTGAAGCTCAATGCGCTCGTCAAGCGCGAGGCGATGCAGCGCGGGCTGATGGTGTATCCGATGGGC
GGCACCGTCGACGGCCATCTCGGCGATCATGTCCTGCTCGCGCCGCCGTTCATCTGCACCGCGCCGCAGATCGACACGAT
CGTCGAGCGGCTCGGCGACGCGATCGACGCGGCGCTCGCGTCGATCGGCGCGGCGGCGTTGCGCTGA

Upstream 100 bases:

>100_bases
TCGCGTTCGAGGTGCGCGAGCGAGGCCGGGTACGCTTTCAGCAATTCGTGCCGCGGGATGCGCAGCGTCCGCCGGTGCAT
CGACACGAACGAGGACACGC

Downstream 100 bases:

>100_bases
CGCACCAACCTTGTTTCGTCGAACCGACATGAAGAAAACGAAGATGAGGCTTCCTGAATTCAATCGCGACACCGCGACCG
ACGAACAGAAGGCCGTGCTC

Product: hypothetical protein

Products: L-Glutamate; L-Glutamate 5-semialdehyde [C]

Alternate protein names: NA

Number of amino acids: Translated: 448; Mature: 447

Protein sequence:

>448_residues
MTTVFHRAPRASLPIAVAGDGIEIVDSTGTRYIDACGGAAVSCLGHSNQRVIDAIKRQAQQLPYAHTSFFTTQPAEALAD
RLVAAAPAGLEHVYFVSGGSEAIEAALKLARQYFVEKGEPARRHFIARRQSYHGNTLGALAIGGNAWRREPFVPLLIEAH
HVSPCYAYREQRADETEEAFAQRLADELESRILALGPDTVAAFVAETVVGATAGAVPPVREYFRKIRAVCDKYGVLLILD
EIMSGMGRTGYLFACEEDGVAPDLLTIAKGLGAGYQPIGATLVSDAIYRTIVDGSGFFQHGHTYVGHASACAAALEVQRV
IDEERLLENVKARGEQLRASLAVRSAEQPHIGDVRGRGLFVGVELVRDRDTKAPFDPRLKLNALVKREAMQRGLMVYPMG
GTVDGHLGDHVLLAPPFICTAPQIDTIVERLGDAIDAALASIGAAALR

Sequences:

>Translated_448_residues
MTTVFHRAPRASLPIAVAGDGIEIVDSTGTRYIDACGGAAVSCLGHSNQRVIDAIKRQAQQLPYAHTSFFTTQPAEALAD
RLVAAAPAGLEHVYFVSGGSEAIEAALKLARQYFVEKGEPARRHFIARRQSYHGNTLGALAIGGNAWRREPFVPLLIEAH
HVSPCYAYREQRADETEEAFAQRLADELESRILALGPDTVAAFVAETVVGATAGAVPPVREYFRKIRAVCDKYGVLLILD
EIMSGMGRTGYLFACEEDGVAPDLLTIAKGLGAGYQPIGATLVSDAIYRTIVDGSGFFQHGHTYVGHASACAAALEVQRV
IDEERLLENVKARGEQLRASLAVRSAEQPHIGDVRGRGLFVGVELVRDRDTKAPFDPRLKLNALVKREAMQRGLMVYPMG
GTVDGHLGDHVLLAPPFICTAPQIDTIVERLGDAIDAALASIGAAALR
>Mature_447_residues
TTVFHRAPRASLPIAVAGDGIEIVDSTGTRYIDACGGAAVSCLGHSNQRVIDAIKRQAQQLPYAHTSFFTTQPAEALADR
LVAAAPAGLEHVYFVSGGSEAIEAALKLARQYFVEKGEPARRHFIARRQSYHGNTLGALAIGGNAWRREPFVPLLIEAHH
VSPCYAYREQRADETEEAFAQRLADELESRILALGPDTVAAFVAETVVGATAGAVPPVREYFRKIRAVCDKYGVLLILDE
IMSGMGRTGYLFACEEDGVAPDLLTIAKGLGAGYQPIGATLVSDAIYRTIVDGSGFFQHGHTYVGHASACAAALEVQRVI
DEERLLENVKARGEQLRASLAVRSAEQPHIGDVRGRGLFVGVELVRDRDTKAPFDPRLKLNALVKREAMQRGLMVYPMGG
TVDGHLGDHVLLAPPFICTAPQIDTIVERLGDAIDAALASIGAAALR

Specific function: Unknown

COG id: COG0161

COG function: function code H; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI13994255, Length=436, Percent_Identity=27.7522935779816, Blast_Score=139, Evalue=5e-33,
Organism=Homo sapiens, GI37574042, Length=382, Percent_Identity=29.8429319371728, Blast_Score=132, Evalue=4e-31,
Organism=Homo sapiens, GI226442705, Length=374, Percent_Identity=29.4117647058824, Blast_Score=132, Evalue=8e-31,
Organism=Homo sapiens, GI4557809, Length=426, Percent_Identity=26.7605633802817, Blast_Score=128, Evalue=1e-29,
Organism=Homo sapiens, GI226442709, Length=342, Percent_Identity=30.1169590643275, Blast_Score=125, Evalue=8e-29,
Organism=Homo sapiens, GI24119277, Length=408, Percent_Identity=28.4313725490196, Blast_Score=122, Evalue=5e-28,
Organism=Homo sapiens, GI284507298, Length=342, Percent_Identity=28.6549707602339, Blast_Score=106, Evalue=4e-23,
Organism=Escherichia coli, GI145693181, Length=352, Percent_Identity=34.0909090909091, Blast_Score=197, Evalue=9e-52,
Organism=Escherichia coli, GI1788044, Length=437, Percent_Identity=31.5789473684211, Blast_Score=180, Evalue=2e-46,
Organism=Escherichia coli, GI1789759, Length=421, Percent_Identity=31.5914489311164, Blast_Score=173, Evalue=2e-44,
Organism=Escherichia coli, GI1786991, Length=435, Percent_Identity=31.0344827586207, Blast_Score=165, Evalue=5e-42,
Organism=Escherichia coli, GI1789016, Length=386, Percent_Identity=31.3471502590674, Blast_Score=162, Evalue=5e-41,
Organism=Escherichia coli, GI1787560, Length=426, Percent_Identity=30.0469483568075, Blast_Score=135, Evalue=6e-33,
Organism=Escherichia coli, GI1786349, Length=269, Percent_Identity=28.996282527881, Blast_Score=85, Evalue=9e-18,
Organism=Caenorhabditis elegans, GI32564660, Length=442, Percent_Identity=30.0904977375566, Blast_Score=153, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI71992977, Length=388, Percent_Identity=28.6082474226804, Blast_Score=149, Evalue=3e-36,
Organism=Caenorhabditis elegans, GI25144271, Length=433, Percent_Identity=26.3279445727483, Blast_Score=139, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI25144274, Length=244, Percent_Identity=31.1475409836066, Blast_Score=117, Evalue=9e-27,
Organism=Saccharomyces cerevisiae, GI6324432, Length=351, Percent_Identity=31.9088319088319, Blast_Score=154, Evalue=4e-38,
Organism=Saccharomyces cerevisiae, GI6323470, Length=451, Percent_Identity=28.6031042128603, Blast_Score=139, Evalue=7e-34,
Organism=Saccharomyces cerevisiae, GI6324386, Length=481, Percent_Identity=22.8690228690229, Blast_Score=116, Evalue=9e-27,
Organism=Drosophila melanogaster, GI21357415, Length=422, Percent_Identity=29.3838862559242, Blast_Score=152, Evalue=3e-37,
Organism=Drosophila melanogaster, GI161085790, Length=447, Percent_Identity=27.0693512304251, Blast_Score=138, Evalue=8e-33,
Organism=Drosophila melanogaster, GI28574759, Length=381, Percent_Identity=29.1338582677165, Blast_Score=137, Evalue=1e-32,
Organism=Drosophila melanogaster, GI21356575, Length=431, Percent_Identity=28.7703016241299, Blast_Score=135, Evalue=5e-32,
Organism=Drosophila melanogaster, GI281366494, Length=391, Percent_Identity=26.5984654731458, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24667139, Length=391, Percent_Identity=26.5984654731458, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24667143, Length=391, Percent_Identity=26.5984654731458, Blast_Score=94, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005814
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00202 Aminotran_3 [H]

EC number: 2.6.1.13 [C]

Molecular weight: Translated: 48143; Mature: 48012

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00600 AA_TRANSFER_CLASS_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTVFHRAPRASLPIAVAGDGIEIVDSTGTRYIDACGGAAVSCLGHSNQRVIDAIKRQAQ
CCCCCCCCCCCCCCEEEECCCEEEEECCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHH
QLPYAHTSFFTTQPAEALADRLVAAAPAGLEHVYFVSGGSEAIEAALKLARQYFVEKGEP
HCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCH
ARRHFIARRQSYHGNTLGALAIGGNAWRREPFVPLLIEAHHVSPCYAYREQRADETEEAF
HHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCHHHHHH
AQRLADELESRILALGPDTVAAFVAETVVGATAGAVPPVREYFRKIRAVCDKYGVLLILD
HHHHHHHHHHCEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHH
EIMSGMGRTGYLFACEEDGVAPDLLTIAKGLGAGYQPIGATLVSDAIYRTIVDGSGFFQH
HHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHC
GHTYVGHASACAAALEVQRVIDEERLLENVKARGEQLRASLAVRSAEQPHIGDVRGRGLF
CCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEE
VGVELVRDRDTKAPFDPRLKLNALVKREAMQRGLMVYPMGGTVDGHLGDHVLLAPPFICT
EEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEECCCCEEC
APQIDTIVERLGDAIDAALASIGAAALR
CCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TTVFHRAPRASLPIAVAGDGIEIVDSTGTRYIDACGGAAVSCLGHSNQRVIDAIKRQAQ
CCCCCCCCCCCCCEEEECCCEEEEECCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHH
QLPYAHTSFFTTQPAEALADRLVAAAPAGLEHVYFVSGGSEAIEAALKLARQYFVEKGEP
HCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCH
ARRHFIARRQSYHGNTLGALAIGGNAWRREPFVPLLIEAHHVSPCYAYREQRADETEEAF
HHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCHHHHHH
AQRLADELESRILALGPDTVAAFVAETVVGATAGAVPPVREYFRKIRAVCDKYGVLLILD
HHHHHHHHHHCEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHH
EIMSGMGRTGYLFACEEDGVAPDLLTIAKGLGAGYQPIGATLVSDAIYRTIVDGSGFFQH
HHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHC
GHTYVGHASACAAALEVQRVIDEERLLENVKARGEQLRASLAVRSAEQPHIGDVRGRGLF
CCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEE
VGVELVRDRDTKAPFDPRLKLNALVKREAMQRGLMVYPMGGTVDGHLGDHVLLAPPFICT
EEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEECCCCEEC
APQIDTIVERLGDAIDAALASIGAAALR
CCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Pyridoxal Phosphate. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 2-Oxoglutarate; Ornithine [C]

Specific reaction: 2-Oxoglutarate + Ornithine --> L-Glutamate + L-Glutamate 5-semialdehyde [C]

General reaction: Amino group transfer [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377 [H]