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The map label for this gene is psd [H]

Identifier: 53723279

GI number: 53723279

Start: 3038859

End: 3040160

Strand: Reverse

Name: psd [H]

Synonym: BPSS2261

Alternate gene names: 53723279

Gene position: 3040160-3038859 (Counterclockwise)

Preceding gene: 53723280

Following gene: 53723278

Centisome position: 95.81

GC content: 68.74

Gene sequence:

>1302_bases
ATGACGAACCGAACGAACGCAACCCACGCGACGAACGCGACGAACGCGACAAATGCCGCCCGTGAGGCGGCCGCCGAGCG
CCGACGCCTAGGCGGATGGCTGCCCGCCGAGGAGGCGGCGCTCGCGCGCTATCGGAAGACGCTCGCCGCGCACGCGCGCG
AGCACGCGGACGGCGTGCCGATGACGGAGGCGGTGCGCGAGCTCGCGGCGCTCGCCGAAGGCGAGCCGCCGCTGCGCATG
GCGCTGACGCGCGCGATCGACGAGGCGCGCTCGCGCGGCTACGAGCTCGGCTACGAGACGATCGGCGAACTGATGGCGGT
GATCGATTTCGTGATGACGTACGCGCCGCCGTTCAGCGAATCCGGGCTCGTGGTCTGCCCGCTGAACGCGCTGCTCGACT
GGCCGCTTTGCATGCCGTCCGGCTACGCGTTCTTTCGCGACCGCGCGGTGAACGCGCAACTCAAGCGCGTGCTGAACGTA
TGGTGCGGCTTTCTGGGCGGCCCGCATTCGCGCGCGCACCTGAACGCGTCGGAGCCGGACGGCTGGTTCAGCGCGGAGGC
CGTGAAGCGGATCGGCATGTCGCAGTTCCATTGCGATCCGCAACTGCCCTACTGGGGCTTCGCCTCGTGGAACGATTTCT
TTACGCGGCGCTTTCTGCCCGACGCGCGGCCCGTCGCGACGCCGGACGATCCGGCCGTGATCGTCAGCGCATGCGAGGCC
GCGCCGTATCACGTCGCGCACGATCTGAAGCTGCTCGACACGTTCTGGATCAAGTCGCAGCCGTATTCGCTGCGCGACAT
CTTCACCGCGGCGCGCGGCGAGCTCGCGCGCGGCTTCGTCGGCGGCTCGCTGTACCAGGCGTTCCTGAGCGCCTACGATT
ATCACCGCTGGCATGCGCCCGTCGCGGGGCGCATCGCGCACGCGTATCTCGTCGACGGCACCTACTATTCGAGCACCGAG
GCCGAAGGCGCGGACCCGGCCGGGCTCAACGATTCGCAGGGCTACATGACGGCCGTCGCGACGCGCGCGGTGATCGTCAT
CGATGCCGATGCGCCGGAGATCGGCCGCGTCGCATGCGTGTTCGTCGGGATGGGCGAAGTGTCGTCGTGCATGATCGACG
CGCTGCCCGGGCAGCATGTCGAGAAGGGCGAGGAAATCGGCTACTTCCAGTACGGCGGCTCGACATACTGCATGCTCTTC
GAGCCGGGCGTGATCGGCAGCTTCGTCGCGCATCCGCGTTATCACGAAGGCGCGCCGGCCGTGCAGGTGAACGCGGAAGT
GGCGGCCGTCGCGGCGAAGTGA

Upstream 100 bases:

>100_bases
GCCGACCGGAGCCGGCGCTTCGCTCGACGTTCGCTTTCGCGAAGCTTGCCTTTCCGTCTCGCCCATCGCCTCGCGTCACC
CGATCGAATGGAGGGCCGAC

Downstream 100 bases:

>100_bases
GCGGCGGCGGCAACGACAACGACAAGAGCAACGGGAACGGCGCGGCGTGCCGTTCCCGCCGCGCGCACGGCAGCGCATGC
GCGGCCTGTCGCGCGCGACT

Product: phosphatidylserine decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 432

Protein sequence:

>433_residues
MTNRTNATHATNATNATNAAREAAAERRRLGGWLPAEEAALARYRKTLAAHAREHADGVPMTEAVRELAALAEGEPPLRM
ALTRAIDEARSRGYELGYETIGELMAVIDFVMTYAPPFSESGLVVCPLNALLDWPLCMPSGYAFFRDRAVNAQLKRVLNV
WCGFLGGPHSRAHLNASEPDGWFSAEAVKRIGMSQFHCDPQLPYWGFASWNDFFTRRFLPDARPVATPDDPAVIVSACEA
APYHVAHDLKLLDTFWIKSQPYSLRDIFTAARGELARGFVGGSLYQAFLSAYDYHRWHAPVAGRIAHAYLVDGTYYSSTE
AEGADPAGLNDSQGYMTAVATRAVIVIDADAPEIGRVACVFVGMGEVSSCMIDALPGQHVEKGEEIGYFQYGGSTYCMLF
EPGVIGSFVAHPRYHEGAPAVQVNAEVAAVAAK

Sequences:

>Translated_433_residues
MTNRTNATHATNATNATNAAREAAAERRRLGGWLPAEEAALARYRKTLAAHAREHADGVPMTEAVRELAALAEGEPPLRM
ALTRAIDEARSRGYELGYETIGELMAVIDFVMTYAPPFSESGLVVCPLNALLDWPLCMPSGYAFFRDRAVNAQLKRVLNV
WCGFLGGPHSRAHLNASEPDGWFSAEAVKRIGMSQFHCDPQLPYWGFASWNDFFTRRFLPDARPVATPDDPAVIVSACEA
APYHVAHDLKLLDTFWIKSQPYSLRDIFTAARGELARGFVGGSLYQAFLSAYDYHRWHAPVAGRIAHAYLVDGTYYSSTE
AEGADPAGLNDSQGYMTAVATRAVIVIDADAPEIGRVACVFVGMGEVSSCMIDALPGQHVEKGEEIGYFQYGGSTYCMLF
EPGVIGSFVAHPRYHEGAPAVQVNAEVAAVAAK
>Mature_432_residues
TNRTNATHATNATNATNAAREAAAERRRLGGWLPAEEAALARYRKTLAAHAREHADGVPMTEAVRELAALAEGEPPLRMA
LTRAIDEARSRGYELGYETIGELMAVIDFVMTYAPPFSESGLVVCPLNALLDWPLCMPSGYAFFRDRAVNAQLKRVLNVW
CGFLGGPHSRAHLNASEPDGWFSAEAVKRIGMSQFHCDPQLPYWGFASWNDFFTRRFLPDARPVATPDDPAVIVSACEAA
PYHVAHDLKLLDTFWIKSQPYSLRDIFTAARGELARGFVGGSLYQAFLSAYDYHRWHAPVAGRIAHAYLVDGTYYSSTEA
EGADPAGLNDSQGYMTAVATRAVIVIDADAPEIGRVACVFVGMGEVSSCMIDALPGQHVEKGEEIGYFQYGGSTYCMLFE
PGVIGSFVAHPRYHEGAPAVQVNAEVAAVAAK

Specific function: Unknown

COG id: COG0688

COG function: function code I; Phosphatidylserine decarboxylase

Gene ontology:

Cell location: Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphatidylserine decarboxylase family. Type 2 subfamily [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6321609, Length=194, Percent_Identity=24.2268041237113, Blast_Score=76, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003817
- InterPro:   IPR005221 [H]

Pfam domain/function: PF02666 PS_Dcarbxylase [H]

EC number: =4.1.1.65 [H]

Molecular weight: Translated: 47130; Mature: 46998

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNRTNATHATNATNATNAAREAAAERRRLGGWLPAEEAALARYRKTLAAHAREHADGVP
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
MTEAVRELAALAEGEPPLRMALTRAIDEARSRGYELGYETIGELMAVIDFVMTYAPPFSE
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
SGLVVCPLNALLDWPLCMPSGYAFFRDRAVNAQLKRVLNVWCGFLGGPHSRAHLNASEPD
CCEEEEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
GWFSAEAVKRIGMSQFHCDPQLPYWGFASWNDFFTRRFLPDARPVATPDDPAVIVSACEA
CCCCHHHHHHCCCHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEHHCC
APYHVAHDLKLLDTFWIKSQPYSLRDIFTAARGELARGFVGGSLYQAFLSAYDYHRWHAP
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VAGRIAHAYLVDGTYYSSTEAEGADPAGLNDSQGYMTAVATRAVIVIDADAPEIGRVACV
HHHHHEEEEEECCCEECCCCCCCCCCCCCCCCCCHHHEEECEEEEEEECCCCCCCCEEEE
FVGMGEVSSCMIDALPGQHVEKGEEIGYFQYGGSTYCMLFEPGVIGSFVAHPRYHEGAPA
EEECCCHHHHHHHCCCCCHHCCCCCCCEEEECCCEEEEEECCCCHHHHHCCCCCCCCCCE
VQVNAEVAAVAAK
EEECCEEEEEECC
>Mature Secondary Structure 
TNRTNATHATNATNATNAAREAAAERRRLGGWLPAEEAALARYRKTLAAHAREHADGVP
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
MTEAVRELAALAEGEPPLRMALTRAIDEARSRGYELGYETIGELMAVIDFVMTYAPPFSE
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
SGLVVCPLNALLDWPLCMPSGYAFFRDRAVNAQLKRVLNVWCGFLGGPHSRAHLNASEPD
CCEEEEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
GWFSAEAVKRIGMSQFHCDPQLPYWGFASWNDFFTRRFLPDARPVATPDDPAVIVSACEA
CCCCHHHHHHCCCHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEHHCC
APYHVAHDLKLLDTFWIKSQPYSLRDIFTAARGELARGFVGGSLYQAFLSAYDYHRWHAP
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VAGRIAHAYLVDGTYYSSTEAEGADPAGLNDSQGYMTAVATRAVIVIDADAPEIGRVACV
HHHHHEEEEEECCCEECCCCCCCCCCCCCCCCCCHHHEEECEEEEEEECCCCCCCCEEEE
FVGMGEVSSCMIDALPGQHVEKGEEIGYFQYGGSTYCMLFEPGVIGSFVAHPRYHEGAPA
EEECCCHHHHHHHCCCCCHHCCCCCCCEEEECCCEEEEEECCCCHHHHHCCCCCCCCCCE
VQVNAEVAAVAAK
EEECCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA