| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is bvgS [H]
Identifier: 53723264
GI number: 53723264
Start: 3018081
End: 3020396
Strand: Reverse
Name: bvgS [H]
Synonym: BPSS2246
Alternate gene names: 53723264
Gene position: 3020396-3018081 (Counterclockwise)
Preceding gene: 53723267
Following gene: 53723261
Centisome position: 95.19
GC content: 72.75
Gene sequence:
>2316_bases ATGGCGAATTTTGTACGAGGACACGCAAAAAATTACGCGGCGGTGACGGGTTTCATCGCGATCGGCACGTTGCTGCAGGC GGCGCTCGTGCGCTTCGGCGGCGCCGACATGCCGCTCGCGCCGTATTTTCCGTTCATCGCGGCGGCCGCCTGGGCGACGT CGCTCGCGGGGGGGATCGCCGCGACCGCCGCGAGCGCGGCGCTCGCGTGGCTGCTGTTCCTGAACGATCCGGCCGCGTAT CCGGCGCCGCTCGCGGGGCGGCTCATGCAGCTCGCGACGTTCGCCGTCGTGAGTTGCGCGATCTGCGCGATCGTCGTCGC GCTCAAGGGCTCGCGCCGCGCGAACGACGCGTTGCGCCGCCGCGAGGCGGCGGCGCGCCGCTACTACGAGACCCTGCTGC AGTCGCTCACGCAGGGCGTCGTCGTCAGTGACCGGCACGGCATGCTCACGTACATGAACCCGAGCGCGGCCGCGCTGATC GGCTGCGATGCGACGGCCGTGCGCGGTCTGCCGTTTCGCGACGTGTACCGCGCCTACGACGGGCGCGGCGCGCGCGTGCG CGCGTCCGCGCTCGAGCACGTGCTGAGGAGCGGCAGGAGCGCGAGCGTCGAAGGGCACTGGCTCGCTCCGCACGACGGGC AGCGGGTGCCGATCGCCGAAGCCGCGTCGCCGCTCGTCGATTCGGCGGGCGACATGACGGGCGCGGTGCTGATCGTGCGC GACATCAGCATCGAGCGCGAGCGATCGGCGGCCAGCCAGATGCTGCGGCGGCTCGTCGAGGCCTCGCCCGACGCGATCGT CGGGGTCGGCTCGAATCGCCGCATCACGAGCTGGAACCCGGCCGCGCGCCGGATGTTCGGCTACGACGAGCACGCGGCGC GCGGGTGCGACGTCGCGATGCTGATCGCGCCGCGCTGGCTGCGCAATCATCCGCTGCCCGAATCGGTGCCCGACATGCGC GAGCCGATCGAGAACGTCGACGTGCTGTGCGTGCGGCAGGACGGCGGGCGGATGCGCGCGACGATGTCGGCGTCGCCCGT GTTCGACGAGCGCGACGCGTGCATCGCGCTGTCGCTGACGCTGCGCGACACGGGCGAGCAGCGCCGGCGCGAACGCCGCG TGCACCGCTCGCTGCGCGGCGCGCGCGACGCGCGCCGGCAGGCCGACACGTCGAACCGGCTGAAGGACGAGCTGCTCGCC ACCGTGTCGCACGAGTTGCGCACGCCGCTGAACGTGATCTACGGCTGGATCGAGGTGCTGCGCAATCCGGTGGACGGCGC GCTGCAGCAGCAGGCGATCGATGCGATCGACCGCAGCGCGCGCTCGCTGTCGCGGATGGTCGGCGATATTCTCGATGCAT CGTCGCTCGCGACGGGCAAGCTGCGGCTCGATGCGATGCCGGTCGATCTCGTGCGCATCGTCAACGACGTGACGGGCGCG CTCGGCGCGGCCGCGCAGGCCGACGGGATCGCGCTGTCGGTCGAATGCGCGCTCGGCACGTGCATCGTGTCCGGCGACGG CGAGCGGCTGCGGCAGATGCTGTCGAACCTGCTGTCGAACGCGTTCAAGTTCACGCCGCGCGGCGGCCGCGTGACCGTGT CGCTCGAGCGCCACGACGCGCAGGCGAAGCTGACGGTTGCCGATACGGGCCAGGGCATCTCGCCCGAATTCCTGCCGCAC GTGTTCGAGGCGTTCCGGCGCGCGGAAGGCGCGCCCGCATCGCCGCGGCGCGGGCTCGGCCTCGGGCTGTCGATCGTGCG GCACATCGCGGAGCTGCACGGCGGCAAGGTCGAGGCCGCGAGCGCGGGCAAGAACCGCGGCACGACGTTCGCGATCACGC TGCCCGCCGGCTGGCAGCCGATGGGCGCGCTCGCATGGGCCGCGCAGGCCGAGGGCGGCGCGCGGATGACGCTCGACGCG CAGCGGATCCTGCTCGTCGACGACGACGCGACCTCGCGTGCGAGCCTGGCCGCCGCGCTGAAGACGCTCGGCGCGGAGGT GGTCGTCGCGTCGTCGGGGCGCGAGGCGATCGGGAAGGTGGACGCGATGCGGCCGACCGTCGTGCTGTCCGATCTCGCGA TGCCCGACGGCGACGGCTACTGGCTGCTCGACACGCTGCGCCACGTGGACGCGGATGCGGATGCGGACACGCGCACGCGC GCGGCGAACGACGCGCCGGTGCTCGCCGTCACCGCGCATGCGGGGCGCGACAGCGAGCGGCGCGTGCTCGCGGCGGGCTT CGACGGCTATCTATGCAAGCCGGTCGATCTGCAGACGCTCGCGCGTGCGATCCTGCGCGCGACGGGCAGCGGCTGA
Upstream 100 bases:
>100_bases TGCGCGGCTTGCCCGTGCGGAGCCGCAACTTCCGTGCCGCCGCGGCGCGTCCGGCTGCGCGCGCGCGCCGCGCGCCCACG CGGCGGCAGGAGGGGATGTG
Downstream 100 bases:
>100_bases CGCGCGCGGGTGAGCTCGCGAATCGCGAACCGTGTGGGTCTCGAGCATGGCCCCGAGCGCAGCGTACCGCGAGCTATGAG GCATGAACCACGAACCACCC
Product: sensor kinase/response regulator fusion protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 771; Mature: 770
Protein sequence:
>771_residues MANFVRGHAKNYAAVTGFIAIGTLLQAALVRFGGADMPLAPYFPFIAAAAWATSLAGGIAATAASAALAWLLFLNDPAAY PAPLAGRLMQLATFAVVSCAICAIVVALKGSRRANDALRRREAAARRYYETLLQSLTQGVVVSDRHGMLTYMNPSAAALI GCDATAVRGLPFRDVYRAYDGRGARVRASALEHVLRSGRSASVEGHWLAPHDGQRVPIAEAASPLVDSAGDMTGAVLIVR DISIERERSAASQMLRRLVEASPDAIVGVGSNRRITSWNPAARRMFGYDEHAARGCDVAMLIAPRWLRNHPLPESVPDMR EPIENVDVLCVRQDGGRMRATMSASPVFDERDACIALSLTLRDTGEQRRRERRVHRSLRGARDARRQADTSNRLKDELLA TVSHELRTPLNVIYGWIEVLRNPVDGALQQQAIDAIDRSARSLSRMVGDILDASSLATGKLRLDAMPVDLVRIVNDVTGA LGAAAQADGIALSVECALGTCIVSGDGERLRQMLSNLLSNAFKFTPRGGRVTVSLERHDAQAKLTVADTGQGISPEFLPH VFEAFRRAEGAPASPRRGLGLGLSIVRHIAELHGGKVEAASAGKNRGTTFAITLPAGWQPMGALAWAAQAEGGARMTLDA QRILLVDDDATSRASLAAALKTLGAEVVVASSGREAIGKVDAMRPTVVLSDLAMPDGDGYWLLDTLRHVDADADADTRTR AANDAPVLAVTAHAGRDSERRVLAAGFDGYLCKPVDLQTLARAILRATGSG
Sequences:
>Translated_771_residues MANFVRGHAKNYAAVTGFIAIGTLLQAALVRFGGADMPLAPYFPFIAAAAWATSLAGGIAATAASAALAWLLFLNDPAAY PAPLAGRLMQLATFAVVSCAICAIVVALKGSRRANDALRRREAAARRYYETLLQSLTQGVVVSDRHGMLTYMNPSAAALI GCDATAVRGLPFRDVYRAYDGRGARVRASALEHVLRSGRSASVEGHWLAPHDGQRVPIAEAASPLVDSAGDMTGAVLIVR DISIERERSAASQMLRRLVEASPDAIVGVGSNRRITSWNPAARRMFGYDEHAARGCDVAMLIAPRWLRNHPLPESVPDMR EPIENVDVLCVRQDGGRMRATMSASPVFDERDACIALSLTLRDTGEQRRRERRVHRSLRGARDARRQADTSNRLKDELLA TVSHELRTPLNVIYGWIEVLRNPVDGALQQQAIDAIDRSARSLSRMVGDILDASSLATGKLRLDAMPVDLVRIVNDVTGA LGAAAQADGIALSVECALGTCIVSGDGERLRQMLSNLLSNAFKFTPRGGRVTVSLERHDAQAKLTVADTGQGISPEFLPH VFEAFRRAEGAPASPRRGLGLGLSIVRHIAELHGGKVEAASAGKNRGTTFAITLPAGWQPMGALAWAAQAEGGARMTLDA QRILLVDDDATSRASLAAALKTLGAEVVVASSGREAIGKVDAMRPTVVLSDLAMPDGDGYWLLDTLRHVDADADADTRTR AANDAPVLAVTAHAGRDSERRVLAAGFDGYLCKPVDLQTLARAILRATGSG >Mature_770_residues ANFVRGHAKNYAAVTGFIAIGTLLQAALVRFGGADMPLAPYFPFIAAAAWATSLAGGIAATAASAALAWLLFLNDPAAYP APLAGRLMQLATFAVVSCAICAIVVALKGSRRANDALRRREAAARRYYETLLQSLTQGVVVSDRHGMLTYMNPSAAALIG CDATAVRGLPFRDVYRAYDGRGARVRASALEHVLRSGRSASVEGHWLAPHDGQRVPIAEAASPLVDSAGDMTGAVLIVRD ISIERERSAASQMLRRLVEASPDAIVGVGSNRRITSWNPAARRMFGYDEHAARGCDVAMLIAPRWLRNHPLPESVPDMRE PIENVDVLCVRQDGGRMRATMSASPVFDERDACIALSLTLRDTGEQRRRERRVHRSLRGARDARRQADTSNRLKDELLAT VSHELRTPLNVIYGWIEVLRNPVDGALQQQAIDAIDRSARSLSRMVGDILDASSLATGKLRLDAMPVDLVRIVNDVTGAL GAAAQADGIALSVECALGTCIVSGDGERLRQMLSNLLSNAFKFTPRGGRVTVSLERHDAQAKLTVADTGQGISPEFLPHV FEAFRRAEGAPASPRRGLGLGLSIVRHIAELHGGKVEAASAGKNRGTTFAITLPAGWQPMGALAWAAQAEGGARMTLDAQ RILLVDDDATSRASLAAALKTLGAEVVVASSGREAIGKVDAMRPTVVLSDLAMPDGDGYWLLDTLRHVDADADADTRTRA ANDAPVLAVTAHAGRDSERRVLAAGFDGYLCKPVDLQTLARAILRATGSG
Specific function: Member of the two-component regulatory system BvgS/BvgA. Phosphorylates BvgA via a four-step phosphorelay in response to environmental signals [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788713, Length=375, Percent_Identity=31.7333333333333, Blast_Score=155, Evalue=8e-39, Organism=Escherichia coli, GI48994928, Length=566, Percent_Identity=27.5618374558304, Blast_Score=151, Evalue=2e-37, Organism=Escherichia coli, GI1789149, Length=295, Percent_Identity=29.8305084745763, Blast_Score=125, Evalue=1e-29, Organism=Escherichia coli, GI87081816, Length=392, Percent_Identity=29.8469387755102, Blast_Score=122, Evalue=6e-29, Organism=Escherichia coli, GI1786600, Length=296, Percent_Identity=30.7432432432432, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI1788393, Length=227, Percent_Identity=30.8370044052863, Blast_Score=114, Evalue=3e-26, Organism=Escherichia coli, GI1786783, Length=220, Percent_Identity=32.7272727272727, Blast_Score=99, Evalue=9e-22, Organism=Escherichia coli, GI1788549, Length=371, Percent_Identity=24.2587601078167, Blast_Score=97, Evalue=4e-21, Organism=Escherichia coli, GI1786912, Length=246, Percent_Identity=28.4552845528455, Blast_Score=96, Evalue=8e-21, Organism=Escherichia coli, GI145693157, Length=252, Percent_Identity=29.3650793650794, Blast_Score=93, Evalue=7e-20, Organism=Escherichia coli, GI1790436, Length=246, Percent_Identity=30.0813008130081, Blast_Score=86, Evalue=6e-18, Organism=Escherichia coli, GI1788279, Length=222, Percent_Identity=31.0810810810811, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI87082128, Length=228, Percent_Identity=28.0701754385965, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1790861, Length=225, Percent_Identity=29.3333333333333, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1790346, Length=221, Percent_Identity=27.6018099547511, Blast_Score=70, Evalue=6e-13, Organism=Escherichia coli, GI1789808, Length=210, Percent_Identity=30, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1790551, Length=211, Percent_Identity=28.436018957346, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1789403, Length=203, Percent_Identity=29.5566502463054, Blast_Score=64, Evalue=4e-11, Organism=Escherichia coli, GI1787894, Length=233, Percent_Identity=27.4678111587983, Blast_Score=63, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR001638 - InterPro: IPR004358 - InterPro: IPR008207 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF01627 Hpt; PF00989 PAS; PF00072 Response_reg; PF00497 SBP_bac_3 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 82181; Mature: 82050
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANFVRGHAKNYAAVTGFIAIGTLLQAALVRFGGADMPLAPYFPFIAAAAWATSLAGGIA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH ATAASAALAWLLFLNDPAAYPAPLAGRLMQLATFAVVSCAICAIVVALKGSRRANDALRR HHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH REAAARRYYETLLQSLTQGVVVSDRHGMLTYMNPSAAALIGCDATAVRGLPFRDVYRAYD HHHHHHHHHHHHHHHHHCCEEEECCCCEEEEECCCCEEEEECCHHHHCCCCHHHHHHHHC GRGARVRASALEHVLRSGRSASVEGHWLAPHDGQRVPIAEAASPLVDSAGDMTGAVLIVR CCCCEEHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEE DISIERERSAASQMLRRLVEASPDAIVGVGSNRRITSWNPAARRMFGYDEHAARGCDVAM ECCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCEECCCCHHHHHHCCCCHHHCCCCCEEE LIAPRWLRNHPLPESVPDMREPIENVDVLCVRQDGGRMRATMSASPVFDERDACIALSLT EECCHHHHCCCCCCCCCHHHHHHCCCCEEEEECCCCCEEEEECCCCCCCCCCCEEEEEEE LRDTGEQRRRERRVHRSLRGARDARRQADTSNRLKDELLATVSHELRTPLNVIYGWIEVL ECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH RNPVDGALQQQAIDAIDRSARSLSRMVGDILDASSLATGKLRLDAMPVDLVRIVNDVTGA HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHH LGAAAQADGIALSVECALGTCIVSGDGERLRQMLSNLLSNAFKFTPRGGRVTVSLERHDA HHCCCCCCCEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHEEECCCCCEEEEEEECCCC QAKLTVADTGQGISPEFLPHVFEAFRRAEGAPASPRRGLGLGLSIVRHIAELHGGKVEAA CEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEC SAGKNRGTTFAITLPAGWQPMGALAWAAQAEGGARMTLDAQRILLVDDDATSRASLAAAL CCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEECCEEEEEECCCCHHHHHHHHH KTLGAEVVVASSGREAIGKVDAMRPTVVLSDLAMPDGDGYWLLDTLRHVDADADADTRTR HHCCCEEEEECCCCHHHHHHHCCCCHHEEHHHCCCCCCCEEHHHHHHHCCCCCCCCCHHC AANDAPVLAVTAHAGRDSERRVLAAGFDGYLCKPVDLQTLARAILRATGSG CCCCCCEEEEEECCCCCCCCEEEEECCCCCEECCCCHHHHHHHHHHHCCCC >Mature Secondary Structure ANFVRGHAKNYAAVTGFIAIGTLLQAALVRFGGADMPLAPYFPFIAAAAWATSLAGGIA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH ATAASAALAWLLFLNDPAAYPAPLAGRLMQLATFAVVSCAICAIVVALKGSRRANDALRR HHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH REAAARRYYETLLQSLTQGVVVSDRHGMLTYMNPSAAALIGCDATAVRGLPFRDVYRAYD HHHHHHHHHHHHHHHHHCCEEEECCCCEEEEECCCCEEEEECCHHHHCCCCHHHHHHHHC GRGARVRASALEHVLRSGRSASVEGHWLAPHDGQRVPIAEAASPLVDSAGDMTGAVLIVR CCCCEEHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEE DISIERERSAASQMLRRLVEASPDAIVGVGSNRRITSWNPAARRMFGYDEHAARGCDVAM ECCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCEECCCCHHHHHHCCCCHHHCCCCCEEE LIAPRWLRNHPLPESVPDMREPIENVDVLCVRQDGGRMRATMSASPVFDERDACIALSLT EECCHHHHCCCCCCCCCHHHHHHCCCCEEEEECCCCCEEEEECCCCCCCCCCCEEEEEEE LRDTGEQRRRERRVHRSLRGARDARRQADTSNRLKDELLATVSHELRTPLNVIYGWIEVL ECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH RNPVDGALQQQAIDAIDRSARSLSRMVGDILDASSLATGKLRLDAMPVDLVRIVNDVTGA HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHH LGAAAQADGIALSVECALGTCIVSGDGERLRQMLSNLLSNAFKFTPRGGRVTVSLERHDA HHCCCCCCCEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHEEECCCCCEEEEEEECCCC QAKLTVADTGQGISPEFLPHVFEAFRRAEGAPASPRRGLGLGLSIVRHIAELHGGKVEAA CEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEC SAGKNRGTTFAITLPAGWQPMGALAWAAQAEGGARMTLDAQRILLVDDDATSRASLAAAL CCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEECCEEEEEECCCCHHHHHHHHH KTLGAEVVVASSGREAIGKVDAMRPTVVLSDLAMPDGDGYWLLDTLRHVDADADADTRTR HHCCCEEEEECCCCHHHHHHHCCCCHHEEHHHCCCCCCCEEHHHHHHHCCCCCCCCCHHC AANDAPVLAVTAHAGRDSERRVLAAGFDGYLCKPVDLQTLARAILRATGSG CCCCCCEEEEEECCCCCCCCEEEEECCCCCEECCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1791760; 12910271 [H]