| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53723258
Identifier: 53723258
GI number: 53723258
Start: 3013274
End: 3013585
Strand: Reverse
Name: 53723258
Synonym: BPSS2240
Alternate gene names: NA
Gene position: 3013585-3013274 (Counterclockwise)
Preceding gene: 53723259
Following gene: 53723257
Centisome position: 94.98
GC content: 66.67
Gene sequence:
>312_bases TTGTCAATGACGTCCCAACATCATCCGCATACCGGCCACGAACTGAGTCGCGCGCGCGCGCACGAGGGCGATCGCGTGCA GCAGGATCACGACAAGGGCGGCCACCAGGGCGGGCACGGCAAGGCGCCGAGCCCGGTCGACATCCAGAAGGCCCTCAAGG GCATGGATTATCCGGCGAGCAAGGACGAGGTCGTCCAGTGCGCGGAGCGCTCGCACGCCGACGGCGTCGTGCTCGACATG CTGCGACGCATTCCCGAGCGGCAGTACGAGACGCCGGCGTCGGTATCGAAGGAGGTCGGCAAGCTGATGTGA
Upstream 100 bases:
>100_bases CGGCTCGCGCCGCGTGGCGCGCCGCCGTCCGCTTCCTGCGTTGCGGCTGCGCGCGGCGAGGTTTGCCGCCGCGCCGCCGC AGCGCGTCATCCGAAGGAGG
Downstream 100 bases:
>100_bases CGCGATGCGCGCGGCTGCGGCGCGGCGCGAGCGTGCGACGCGGGCCCCGGCTGCACGGCCGCGTCCCGCGCCGGCGTGCT TGCCGCACCGCGCCGCACCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MSMTSQHHPHTGHELSRARAHEGDRVQQDHDKGGHQGGHGKAPSPVDIQKALKGMDYPASKDEVVQCAERSHADGVVLDM LRRIPERQYETPASVSKEVGKLM
Sequences:
>Translated_103_residues MSMTSQHHPHTGHELSRARAHEGDRVQQDHDKGGHQGGHGKAPSPVDIQKALKGMDYPASKDEVVQCAERSHADGVVLDM LRRIPERQYETPASVSKEVGKLM >Mature_102_residues SMTSQHHPHTGHELSRARAHEGDRVQQDHDKGGHQGGHGKAPSPVDIQKALKGMDYPASKDEVVQCAERSHADGVVLDML RRIPERQYETPASVSKEVGKLM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11357; Mature: 11226
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMTSQHHPHTGHELSRARAHEGDRVQQDHDKGGHQGGHGKAPSPVDIQKALKGMDYPAS CCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCC KDEVVQCAERSHADGVVLDMLRRIPERQYETPASVSKEVGKLM HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCC >Mature Secondary Structure SMTSQHHPHTGHELSRARAHEGDRVQQDHDKGGHQGGHGKAPSPVDIQKALKGMDYPAS CCCCCCCCCCCHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCC KDEVVQCAERSHADGVVLDMLRRIPERQYETPASVSKEVGKLM HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA