| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53723254
Identifier: 53723254
GI number: 53723254
Start: 3010008
End: 3010649
Strand: Reverse
Name: 53723254
Synonym: BPSS2236
Alternate gene names: NA
Gene position: 3010649-3010008 (Counterclockwise)
Preceding gene: 53723255
Following gene: 53723253
Centisome position: 94.88
GC content: 70.09
Gene sequence:
>642_bases GTGGGGCGCGGCCCCGCCGAAACGGAGGCAGCCATGGCGAAGAAACAACTCGGCGAAGGCGTTCGCGAGTTGCTGTATCA GGCGCTCGAGACGGAACTCGGCGGCGCGAAGGTGTACGAGGCGGCGCTGTCGGTCGTGACCGACGAGGCGCTGCGCGAAG AATGGCAGAAGTATCGCGACGAGACGCTGCATCACCAGGAAGTGCTGCGCTCGGTGTTCGACGCGCTCGGCCTCGATCCC GACGAGAAGACGCGTGGCCGCGCGGCCGTGGCGGGGCTCGGCAAGGCGCTCGTCGAAGTGATCGCGTACGCGCGCGGCGG CGGCAATCCGCTCGTCGCGCAGATCGTCGCGGCGGAGTGCGTCGTGCTCGCGGAGACGAAGGATCACCTGAACTGGGAGC TGATCGGGCTCGCGGCGGGCGAGCTGTCCGGCGACGCGGCGCGCGTGCTGAAGGACGCGCACGACGAAGTCGAGCCCGAC GAGGACCATCACCTGTATCACACGCGCGGCTGGACGCGCGAGCTGTGGATGGATTCGATGGACTTCAAGGCGGCGCTGCC GCCGCCCGAAGAGGTGCGCAAGGTCGACACGGCGATCGGCGCGGCGCGCGCCGAGCACGCGCGCGGCCGGATGGCGAGGT GA
Upstream 100 bases:
>100_bases CGCGGCGCGCTGAGCGCGCGCCGCCTCGCATTCGGCGCGCGGCCGGCGCAGGTTCAATCCACGTTCGACCTGCGTTCGAC GCGCGTTCAACATTTCACCG
Downstream 100 bases:
>100_bases CGCGCGCGGCGGGCGACGCGCGCGCGTCACCCGCGCCGCGTGCGGGAAGCGCCGCGGTGCGGCGCTTTTTTGCGCGCGCC GCCGGCTCCGCGCGGTTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MGRGPAETEAAMAKKQLGEGVRELLYQALETELGGAKVYEAALSVVTDEALREEWQKYRDETLHHQEVLRSVFDALGLDP DEKTRGRAAVAGLGKALVEVIAYARGGGNPLVAQIVAAECVVLAETKDHLNWELIGLAAGELSGDAARVLKDAHDEVEPD EDHHLYHTRGWTRELWMDSMDFKAALPPPEEVRKVDTAIGAARAEHARGRMAR
Sequences:
>Translated_213_residues MGRGPAETEAAMAKKQLGEGVRELLYQALETELGGAKVYEAALSVVTDEALREEWQKYRDETLHHQEVLRSVFDALGLDP DEKTRGRAAVAGLGKALVEVIAYARGGGNPLVAQIVAAECVVLAETKDHLNWELIGLAAGELSGDAARVLKDAHDEVEPD EDHHLYHTRGWTRELWMDSMDFKAALPPPEEVRKVDTAIGAARAEHARGRMAR >Mature_212_residues GRGPAETEAAMAKKQLGEGVRELLYQALETELGGAKVYEAALSVVTDEALREEWQKYRDETLHHQEVLRSVFDALGLDPD EKTRGRAAVAGLGKALVEVIAYARGGGNPLVAQIVAAECVVLAETKDHLNWELIGLAAGELSGDAARVLKDAHDEVEPDE DHHLYHTRGWTRELWMDSMDFKAALPPPEEVRKVDTAIGAARAEHARGRMAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23327; Mature: 23195
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRGPAETEAAMAKKQLGEGVRELLYQALETELGGAKVYEAALSVVTDEALREEWQKYRD CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH ETLHHQEVLRSVFDALGLDPDEKTRGRAAVAGLGKALVEVIAYARGGGNPLVAQIVAAEC HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH VVLAETKDHLNWELIGLAAGELSGDAARVLKDAHDEVEPDEDHHLYHTRGWTRELWMDSM HHEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHCCC DFKAALPPPEEVRKVDTAIGAARAEHARGRMAR CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure GRGPAETEAAMAKKQLGEGVRELLYQALETELGGAKVYEAALSVVTDEALREEWQKYRD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH ETLHHQEVLRSVFDALGLDPDEKTRGRAAVAGLGKALVEVIAYARGGGNPLVAQIVAAEC HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH VVLAETKDHLNWELIGLAAGELSGDAARVLKDAHDEVEPDEDHHLYHTRGWTRELWMDSM HHEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHCCC DFKAALPPPEEVRKVDTAIGAARAEHARGRMAR CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA