Definition Burkholderia pseudomallei K96243 chromosome 2, complete sequence.
Accession NC_006351
Length 3,173,005

Click here to switch to the map view.

The map label for this gene is 53723246

Identifier: 53723246

GI number: 53723246

Start: 3002627

End: 3003271

Strand: Reverse

Name: 53723246

Synonym: BPSS2228

Alternate gene names: NA

Gene position: 3003271-3002627 (Counterclockwise)

Preceding gene: 53723249

Following gene: 53723243

Centisome position: 94.65

GC content: 69.92

Gene sequence:

>645_bases
ATGCATCACGAACCCGAAACGAGCCCCCCGATCCTCGCCGCGCCGATCCGTGCCGCGCTGCATCCCGTCATCGACGAAGT
CGTGCATCGCAGCGTGTCCGAGGCGACGACGAAGGACGGCTACATGCGCTGCGCCGATTACGCGATCGTCGGCGCGCGCG
TGCTGAGCATGCTGACCGGCGTGCGATACCGGCCCGTCGCGGGCGGCGAGGTGATGGATTTCGGCGGCGGCAATCTGTTC
GCGCTCTGCTCGACGCGCGAACGGCGCCGCGCCGCGCGGCACCTGTCGCAGCTCGCGCGCTATCACTGCTGGATCGAGGC
GCGCCACACCGACGCTGACGGCCGCGCGCGCACCGAGGTCATCGATTTCACGATGCGCCACGACGCGAGGGTCGCGAGCA
TGGTCGGCATGCCGTTCACCGGCTCGCGCGGGACGTACTGGTGGGGATGGGACGACGAGCACATCGTGCCCGCCGAGCTG
CGTGACCATCCGGCGTTCGCGAAACAAGGGCCGCGCTGGCGCTGGGCGGAACGCGAATGCACCGTGCTGCTGCGCGCTTA
CGAGCGCGAGCGGCCGAACTACTTCGGGCGGCAGGTCTCGCGTGCGCTGCACCTGCTCGCCGACCGGATCGAGCGCGACG
TTTGA

Upstream 100 bases:

>100_bases
AAACCTTTTCCAAACTTGACACAGCGGGTTGTAACGAAAAGTAATAATCCGGCGGCCGCCCATTCCGCGACAGCCGGCGC
GCCTGCGCCGCCCCGACTCC

Downstream 100 bases:

>100_bases
GCGCGCGGCGCCGCGCATCGCGGCGCGTTCCGGCGCAGGTGAGCCTGAAGGGGCGCGGCGCGCGGCATGAGCCCGCGTCG
CCCGGCGCGGCGAGCGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MHHEPETSPPILAAPIRAALHPVIDEVVHRSVSEATTKDGYMRCADYAIVGARVLSMLTGVRYRPVAGGEVMDFGGGNLF
ALCSTRERRRAARHLSQLARYHCWIEARHTDADGRARTEVIDFTMRHDARVASMVGMPFTGSRGTYWWGWDDEHIVPAEL
RDHPAFAKQGPRWRWAERECTVLLRAYERERPNYFGRQVSRALHLLADRIERDV

Sequences:

>Translated_214_residues
MHHEPETSPPILAAPIRAALHPVIDEVVHRSVSEATTKDGYMRCADYAIVGARVLSMLTGVRYRPVAGGEVMDFGGGNLF
ALCSTRERRRAARHLSQLARYHCWIEARHTDADGRARTEVIDFTMRHDARVASMVGMPFTGSRGTYWWGWDDEHIVPAEL
RDHPAFAKQGPRWRWAERECTVLLRAYERERPNYFGRQVSRALHLLADRIERDV
>Mature_214_residues
MHHEPETSPPILAAPIRAALHPVIDEVVHRSVSEATTKDGYMRCADYAIVGARVLSMLTGVRYRPVAGGEVMDFGGGNLF
ALCSTRERRRAARHLSQLARYHCWIEARHTDADGRARTEVIDFTMRHDARVASMVGMPFTGSRGTYWWGWDDEHIVPAEL
RDHPAFAKQGPRWRWAERECTVLLRAYERERPNYFGRQVSRALHLLADRIERDV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24504; Mature: 24504

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHHEPETSPPILAAPIRAALHPVIDEVVHRSVSEATTKDGYMRCADYAIVGARVLSMLTG
CCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
VRYRPVAGGEVMDFGGGNLFALCSTRERRRAARHLSQLARYHCWIEARHTDADGRARTEV
CCCCCCCCCCEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHH
IDFTMRHDARVASMVGMPFTGSRGTYWWGWDDEHIVPAELRDHPAFAKQGPRWRWAEREC
HHHHHHCCHHHHHHHCCCCCCCCCCEEECCCCCCCCHHHHCCCCCHHHCCCCCCCCHHHH
TVLLRAYERERPNYFGRQVSRALHLLADRIERDV
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHHEPETSPPILAAPIRAALHPVIDEVVHRSVSEATTKDGYMRCADYAIVGARVLSMLTG
CCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
VRYRPVAGGEVMDFGGGNLFALCSTRERRRAARHLSQLARYHCWIEARHTDADGRARTEV
CCCCCCCCCCEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHH
IDFTMRHDARVASMVGMPFTGSRGTYWWGWDDEHIVPAELRDHPAFAKQGPRWRWAEREC
HHHHHHCCHHHHHHHCCCCCCCCCCEEECCCCCCCCHHHHCCCCCHHHCCCCCCCCHHHH
TVLLRAYERERPNYFGRQVSRALHLLADRIERDV
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA