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The map label for this gene is yfdH [C]

Identifier: 53723199

GI number: 53723199

Start: 2948508

End: 2949569

Strand: Reverse

Name: yfdH [C]

Synonym: BPSS2182

Alternate gene names: 53723199

Gene position: 2949569-2948508 (Counterclockwise)

Preceding gene: 53723200

Following gene: 53723198

Centisome position: 92.96

GC content: 67.23

Gene sequence:

>1062_bases
ATGCGGGATCAAATAGACATACCGCTCATTTCGCTCGTCGTGCCGTTCTACAACGAAGGCGACGCGGTCACGCGGTTCTT
TGCGGAAGTGATGCCGCTGATGGAGGCGATCGAATCGATCCGCTTCGAGATCGTCTGCGTGAACGACGGCAGCCGCGACG
ACACGCTCGAGCAACTCGTCGCGGTCGGCGCGCGCGAGCCGCGCGTGCGCGTGATCGATCTGACGCGCAACTTCGGCAAG
GAAGCCGCGCTGACGGCGGGCCTCGACGAAGCGAACGGCGACGCGGTGATCCCGATCGACGCGGACCTGCAGGATCCGCC
GAGCCTGATTCCCGTGATGATCGACCATTGGCGCGACGGCGCCGAGGTCGTGGCGGCGAAGCGCAGCAACCGCGCGTGCG
ATACGTTCGCGAAGCGCACCGCCGCCGCGCTGTATTACCGCGTGCACAATGCGCTGTCCGAAGTGAAGCTGCCGGTCAAC
GTCGGCGATTTCCGGCTGATGGACCGGCAGGTCGTCAACGCGTTGCGCAGCCTGCCGGAGCGCCGGCGCTTCATGAAGGG
GCTGTTCGCGTGGGTGGGCTACCGGACCGTGATCGTCGAGTATCAGCGCGAGGCGCGCTGCGCGGGCCACTCGAAATTCT
CCGGCTGGAAGCTCTGGAACTTCGCGCTCGAAGGGATCACGAGCTTCAGCACGGTGCCGCTGCGCAGCTGGACCTACATC
GGGCTCGGCATCGCGGCGCTCGCGTTCCTCTACGGCGGGTTCATCGTCGCGCGCACGCTGTGGCTGGGCAATCAGGTGCC
GGGTTACGCGTCGCTGATTTCGGTGATGCTGTTCATCGGCGGAATCGAGCTGGTCGGCATCGGCGTCGTCGGCGAGTACA
TCGGCCGCATCTATTACGAATCGAAGGAGCGGCCGATCTATCTCGTGCGCCGCCGCTATCAGGCGCGCACGAAGGTGAGC
GCGCTGCCCGTGGGAGCCGCCGCGACGCGCGTCGCGCATGGCGCGCGGGCGGAGTTCGCCCGGCGCCGCGCGATGCCGCG
CGCGCGCGCCGACAGCCGTTGA

Upstream 100 bases:

>100_bases
TGACGGCGCGCGGCGCACCGGACGCCGCGCCGCGGCGCGCGCGGGCGGCGGCATGGCCGCTCGCGGGCCGCCGCCGTCGC
GGGGTTCAGGGAGAAGCATC

Downstream 100 bases:

>100_bases
CCGAAGAACCGACCGACGGAGGACGCCATGTCACCCGACGCTTATCTGCAAATGGCCGCCACCGAGGCGACGCACTGGTG
GTTCCGCGCACGGCGCGAGA

Product: glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MRDQIDIPLISLVVPFYNEGDAVTRFFAEVMPLMEAIESIRFEIVCVNDGSRDDTLEQLVAVGAREPRVRVIDLTRNFGK
EAALTAGLDEANGDAVIPIDADLQDPPSLIPVMIDHWRDGAEVVAAKRSNRACDTFAKRTAAALYYRVHNALSEVKLPVN
VGDFRLMDRQVVNALRSLPERRRFMKGLFAWVGYRTVIVEYQREARCAGHSKFSGWKLWNFALEGITSFSTVPLRSWTYI
GLGIAALAFLYGGFIVARTLWLGNQVPGYASLISVMLFIGGIELVGIGVVGEYIGRIYYESKERPIYLVRRRYQARTKVS
ALPVGAAATRVAHGARAEFARRRAMPRARADSR

Sequences:

>Translated_353_residues
MRDQIDIPLISLVVPFYNEGDAVTRFFAEVMPLMEAIESIRFEIVCVNDGSRDDTLEQLVAVGAREPRVRVIDLTRNFGK
EAALTAGLDEANGDAVIPIDADLQDPPSLIPVMIDHWRDGAEVVAAKRSNRACDTFAKRTAAALYYRVHNALSEVKLPVN
VGDFRLMDRQVVNALRSLPERRRFMKGLFAWVGYRTVIVEYQREARCAGHSKFSGWKLWNFALEGITSFSTVPLRSWTYI
GLGIAALAFLYGGFIVARTLWLGNQVPGYASLISVMLFIGGIELVGIGVVGEYIGRIYYESKERPIYLVRRRYQARTKVS
ALPVGAAATRVAHGARAEFARRRAMPRARADSR
>Mature_353_residues
MRDQIDIPLISLVVPFYNEGDAVTRFFAEVMPLMEAIESIRFEIVCVNDGSRDDTLEQLVAVGAREPRVRVIDLTRNFGK
EAALTAGLDEANGDAVIPIDADLQDPPSLIPVMIDHWRDGAEVVAAKRSNRACDTFAKRTAAALYYRVHNALSEVKLPVN
VGDFRLMDRQVVNALRSLPERRRFMKGLFAWVGYRTVIVEYQREARCAGHSKFSGWKLWNFALEGITSFSTVPLRSWTYI
GLGIAALAFLYGGFIVARTLWLGNQVPGYASLISVMLFIGGIELVGIGVVGEYIGRIYYESKERPIYLVRRRYQARTKVS
ALPVGAAATRVAHGARAEFARRRAMPRARADSR

Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. GtrB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788692, Length=302, Percent_Identity=54.3046357615894, Blast_Score=340, Evalue=1e-94,
Organism=Escherichia coli, GI1788588, Length=316, Percent_Identity=31.0126582278481, Blast_Score=150, Evalue=1e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 39445; Mature: 39445

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDQIDIPLISLVVPFYNEGDAVTRFFAEVMPLMEAIESIRFEIVCVNDGSRDDTLEQLV
CCCCCCCCHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCHHHHHHHH
AVGAREPRVRVIDLTRNFGKEAALTAGLDEANGDAVIPIDADLQDPPSLIPVMIDHWRDG
HCCCCCCCEEEEEECHHCCCHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHCCCCC
AEVVAAKRSNRACDTFAKRTAAALYYRVHNALSEVKLPVNVGDFRLMDRQVVNALRSLPE
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCHH
RRRFMKGLFAWVGYRTVIVEYQREARCAGHSKFSGWKLWNFALEGITSFSTVPLRSWTYI
HHHHHHHHHHHHHHHHHEEHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHH
GLGIAALAFLYGGFIVARTLWLGNQVPGYASLISVMLFIGGIELVGIGVVGEYIGRIYYE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHEEHHHHHHHHHHHHCC
SKERPIYLVRRRYQARTKVSALPVGAAATRVAHGARAEFARRRAMPRARADSR
CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MRDQIDIPLISLVVPFYNEGDAVTRFFAEVMPLMEAIESIRFEIVCVNDGSRDDTLEQLV
CCCCCCCCHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCHHHHHHHH
AVGAREPRVRVIDLTRNFGKEAALTAGLDEANGDAVIPIDADLQDPPSLIPVMIDHWRDG
HCCCCCCCEEEEEECHHCCCHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHCCCCC
AEVVAAKRSNRACDTFAKRTAAALYYRVHNALSEVKLPVNVGDFRLMDRQVVNALRSLPE
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCHH
RRRFMKGLFAWVGYRTVIVEYQREARCAGHSKFSGWKLWNFALEGITSFSTVPLRSWTYI
HHHHHHHHHHHHHHHHHEEHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHH
GLGIAALAFLYGGFIVARTLWLGNQVPGYASLISVMLFIGGIELVGIGVVGEYIGRIYYE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHEEHHHHHHHHHHHHCC
SKERPIYLVRRRYQARTKVSALPVGAAATRVAHGARAEFARRRAMPRARADSR
CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]