| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53723178
Identifier: 53723178
GI number: 53723178
Start: 2924882
End: 2926009
Strand: Reverse
Name: 53723178
Synonym: BPSS2162
Alternate gene names: NA
Gene position: 2926009-2924882 (Counterclockwise)
Preceding gene: 53723179
Following gene: 53723174
Centisome position: 92.22
GC content: 70.66
Gene sequence:
>1128_bases ATGAGCGTCGATGCGATGGCGTCGCCGGCGCTCGCGGGGCGCTCGATCGAGGTCGATTTCTTCCGCGGCGTCGTGCTGCT GACGATCGTCGTCGATCACATCGGCGCGAGCGTGCTGTCGCGCGTGACGCTGCACGCGTTCGCGCTGTGCGACGCGGCCG AGGTGTTCGTGTTCCTCGGCGGCTTCGCGACGGCGAGCGCGTTTCTCTCCGTCAGCGCGCGCCACGGCGCGGGCGCCGCG CGGCGGCGCTTCATGCGCCGCGCCGCGCAGATCTACCGCGCGTTTCTCGCGACGTCCACGCTGATGCTCGTCGTGTCGGC CGTGCTCGATCACTACGGCATCGATGCGCCGAACATGGCGCTCGACGACATCAGCGTGCTGCTCGCGTCGCCGCTCACCG TGCTCGTCGAGCTGCTGACGTTCAAGCGGCAGCCGTATCTCGCTTCGGTGCTGCCGATGTACGTGCTGTTCGCGCTCGCG ACGCCCGCGATCGTGCCGCTCGCGCGCGCGAAGCCGTGGTGGCTGGTGTTCGGCAGCGTGCTGATGTGGGGCTGCGCGCC GTGGCTCGCGGCGCAGCTCCTCGACACCGAATCGTTTCGCTGGAGCTTCAATCCGTTCGCATGGCAACTGATGTTCGTCT TCGGCGTGCTGATGCGCTGCTGGCCGCTGCATCGCGACGCCGCGACGCGGGCGGGGGGCACCGCGATTACCGCCGTCGCG CTCGCGGTCGTGCTCGCATGCGCGTACTACAAGCTGGGTTCCGGATTGCCGCTGCCGGAGGGCGAGTTCAAGCGCCATCT CGCATGGCCGCGCGTGATGAACTTCGCCGCGTTCGCGTGGCTGATGGCCGAGCTCGTCCGGTACGGCTGGATCGCGCGGC TCGCGCGGGCGGCGCGGCCCGTCGTCGCGGTCGGGCAGCGCGGGATGCTGTGCTTCGTCGCCGGCGCGGCGATTTCGTTG ACGCTCGATTCGGTGCTGCATGGCATGCACGGCGGCGCGCGGATGATGCAACTGGGCGCGGGCCTCGCCGCGGATGCCTG CGCGCTCGCGCTGATGCTGAGCATCGCGCGCTCCGATCTGCTGTTGCAGCGGCTGCGCCGCGCCTCCGCCGCCGCCGCCG CCACGTGA
Upstream 100 bases:
>100_bases GGCAATCGCATCCCGCCGCAGCCGAACGCTTCGGCGTGCTGAGCGCCCCGTCGCCCGTCGGCCGACCGGCGCGGGCCGCG CGCATCGATCCGGCCGCGCG
Downstream 100 bases:
>100_bases GGCGGGCGAGCGCGGCGCGCTGCGGGCCCGCGCCGCGCGCGTTCGGCTCCCCTTGGTCCGCTGGGCCCGCCTTGCTCAGC CCGCGACGAGCAGCGGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein OpgC
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MSVDAMASPALAGRSIEVDFFRGVVLLTIVVDHIGASVLSRVTLHAFALCDAAEVFVFLGGFATASAFLSVSARHGAGAA RRRFMRRAAQIYRAFLATSTLMLVVSAVLDHYGIDAPNMALDDISVLLASPLTVLVELLTFKRQPYLASVLPMYVLFALA TPAIVPLARAKPWWLVFGSVLMWGCAPWLAAQLLDTESFRWSFNPFAWQLMFVFGVLMRCWPLHRDAATRAGGTAITAVA LAVVLACAYYKLGSGLPLPEGEFKRHLAWPRVMNFAAFAWLMAELVRYGWIARLARAARPVVAVGQRGMLCFVAGAAISL TLDSVLHGMHGGARMMQLGAGLAADACALALMLSIARSDLLLQRLRRASAAAAAT
Sequences:
>Translated_375_residues MSVDAMASPALAGRSIEVDFFRGVVLLTIVVDHIGASVLSRVTLHAFALCDAAEVFVFLGGFATASAFLSVSARHGAGAA RRRFMRRAAQIYRAFLATSTLMLVVSAVLDHYGIDAPNMALDDISVLLASPLTVLVELLTFKRQPYLASVLPMYVLFALA TPAIVPLARAKPWWLVFGSVLMWGCAPWLAAQLLDTESFRWSFNPFAWQLMFVFGVLMRCWPLHRDAATRAGGTAITAVA LAVVLACAYYKLGSGLPLPEGEFKRHLAWPRVMNFAAFAWLMAELVRYGWIARLARAARPVVAVGQRGMLCFVAGAAISL TLDSVLHGMHGGARMMQLGAGLAADACALALMLSIARSDLLLQRLRRASAAAAAT >Mature_374_residues SVDAMASPALAGRSIEVDFFRGVVLLTIVVDHIGASVLSRVTLHAFALCDAAEVFVFLGGFATASAFLSVSARHGAGAAR RRFMRRAAQIYRAFLATSTLMLVVSAVLDHYGIDAPNMALDDISVLLASPLTVLVELLTFKRQPYLASVLPMYVLFALAT PAIVPLARAKPWWLVFGSVLMWGCAPWLAAQLLDTESFRWSFNPFAWQLMFVFGVLMRCWPLHRDAATRAGGTAITAVAL AVVLACAYYKLGSGLPLPEGEFKRHLAWPRVMNFAAFAWLMAELVRYGWIARLARAARPVVAVGQRGMLCFVAGAAISLT LDSVLHGMHGGARMMQLGAGLAADACALALMLSIARSDLLLQRLRRASAAAAAT
Specific function: Unknown
COG id: COG4645
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40369; Mature: 40238
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVDAMASPALAGRSIEVDFFRGVVLLTIVVDHIGASVLSRVTLHAFALCDAAEVFVFLG CCCCHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFATASAFLSVSARHGAGAARRRFMRRAAQIYRAFLATSTLMLVVSAVLDHYGIDAPNMA HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH LDDISVLLASPLTVLVELLTFKRQPYLASVLPMYVLFALATPAIVPLARAKPWWLVFGSV HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LMWGCAPWLAAQLLDTESFRWSFNPFAWQLMFVFGVLMRCWPLHRDAATRAGGTAITAVA HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHH LAVVLACAYYKLGSGLPLPEGEFKRHLAWPRVMNFAAFAWLMAELVRYGWIARLARAARP HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VVAVGQRGMLCFVAGAAISLTLDSVLHGMHGGARMMQLGAGLAADACALALMLSIARSDL HHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHH LLQRLRRASAAAAAT HHHHHHHHHHHHCCC >Mature Secondary Structure SVDAMASPALAGRSIEVDFFRGVVLLTIVVDHIGASVLSRVTLHAFALCDAAEVFVFLG CCCHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFATASAFLSVSARHGAGAARRRFMRRAAQIYRAFLATSTLMLVVSAVLDHYGIDAPNMA HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH LDDISVLLASPLTVLVELLTFKRQPYLASVLPMYVLFALATPAIVPLARAKPWWLVFGSV HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LMWGCAPWLAAQLLDTESFRWSFNPFAWQLMFVFGVLMRCWPLHRDAATRAGGTAITAVA HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHH LAVVLACAYYKLGSGLPLPEGEFKRHLAWPRVMNFAAFAWLMAELVRYGWIARLARAARP HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VVAVGQRGMLCFVAGAAISLTLDSVLHGMHGGARMMQLGAGLAADACALALMLSIARSDL HHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHH LLQRLRRASAAAAAT HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA