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The map label for this gene is ywoC [H]

Identifier: 53723169

GI number: 53723169

Start: 2913435

End: 2914022

Strand: Reverse

Name: ywoC [H]

Synonym: BPSS2153

Alternate gene names: 53723169

Gene position: 2914022-2913435 (Counterclockwise)

Preceding gene: 53723170

Following gene: 53723168

Centisome position: 91.84

GC content: 66.5

Gene sequence:

>588_bases
ATGTCCATTCCTACGCTGAATCCGACCGTTGCCCTCGTGGCGATCGATTTGCAGAACGGCATCGTTTCGCTGCCCGTGGT
GCCCCAATCGGGCAGCGAGGTGGTTGCGAAGACGGCCGAGCTCGCGAACGCGTTCCGCGCGCGCAAGCTGCCGGTGATCT
TCGTGCACACGAGCTATCAGCCGGACGGCGCCGTCGCGCTGAAGGTGAAGACCGACGTGCCGCCTTCGCCGCCGAATCTC
GATCCCGAGTGGAGCGCGTTCGCGCCCGCGCTCGGCGTGCAGCCGCTCGACGTCGTCGTCACGAAGCATCAGTGGGGCGC
GTTCACGGGCACCGATCTCGACGTGCAGCTGCGCCGCCGCGGGATCACCGACATCGTGCTGACCGGCATCGCGACGAACG
TCGGCGTCGAGTCCACCGCACGCGAGGCTTACGAAAACAACTACAACGTCGTCATCGTCAGCGACGCGGTCAGCACCTGG
TCGACCGACGCGCAGACCTTCGCGCTCACGCAGATCTTTCCGAAGCTCGGGCAGGTTGCGACGGCGGCCGACGTCGAGGC
GGCACTGGAGACGCAGCAGCAGCGTTGA

Upstream 100 bases:

>100_bases
TCGCCGTGAGCGCGCTGCTGCTGTTCAACGCGGCATCGAGCCGGCACATCGACGCCGCCGGTGCCTAACCCGTTCCTCAA
CAGAAGTGAGACCGATCGAC

Downstream 100 bases:

>100_bases
AGCGGCCTGCCCGCGCAACGCGTTCCCCACCATTTGCCATCCATCGAGGATTAGTGATGATCACGACTGAAGCATGGGTG
CTGTATGCCGGCCCCGAACA

Product: isochorismatase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MSIPTLNPTVALVAIDLQNGIVSLPVVPQSGSEVVAKTAELANAFRARKLPVIFVHTSYQPDGAVALKVKTDVPPSPPNL
DPEWSAFAPALGVQPLDVVVTKHQWGAFTGTDLDVQLRRRGITDIVLTGIATNVGVESTAREAYENNYNVVIVSDAVSTW
STDAQTFALTQIFPKLGQVATAADVEAALETQQQR

Sequences:

>Translated_195_residues
MSIPTLNPTVALVAIDLQNGIVSLPVVPQSGSEVVAKTAELANAFRARKLPVIFVHTSYQPDGAVALKVKTDVPPSPPNL
DPEWSAFAPALGVQPLDVVVTKHQWGAFTGTDLDVQLRRRGITDIVLTGIATNVGVESTAREAYENNYNVVIVSDAVSTW
STDAQTFALTQIFPKLGQVATAADVEAALETQQQR
>Mature_194_residues
SIPTLNPTVALVAIDLQNGIVSLPVVPQSGSEVVAKTAELANAFRARKLPVIFVHTSYQPDGAVALKVKTDVPPSPPNLD
PEWSAFAPALGVQPLDVVVTKHQWGAFTGTDLDVQLRRRGITDIVLTGIATNVGVESTAREAYENNYNVVIVSDAVSTWS
TDAQTFALTQIFPKLGQVATAADVEAALETQQQR

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

Organism=Escherichia coli, GI87081992, Length=182, Percent_Identity=45.6043956043956, Blast_Score=151, Evalue=3e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016291
- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 20787; Mature: 20656

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIPTLNPTVALVAIDLQNGIVSLPVVPQSGSEVVAKTAELANAFRARKLPVIFVHTSYQ
CCCCCCCCEEEEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCC
PDGAVALKVKTDVPPSPPNLDPEWSAFAPALGVQPLDVVVTKHQWGAFTGTDLDVQLRRR
CCCEEEEEEECCCCCCCCCCCCCCHHHCCCCCCCCEEEEEECCCCCCCCCCCCEEHHHHC
GITDIVLTGIATNVGVESTAREAYENNYNVVIVSDAVSTWSTDAQTFALTQIFPKLGQVA
CCCEEEEEHHHCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCHH
TAADVEAALETQQQR
HHHHHHHHHHHHCCC
>Mature Secondary Structure 
SIPTLNPTVALVAIDLQNGIVSLPVVPQSGSEVVAKTAELANAFRARKLPVIFVHTSYQ
CCCCCCCEEEEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCC
PDGAVALKVKTDVPPSPPNLDPEWSAFAPALGVQPLDVVVTKHQWGAFTGTDLDVQLRRR
CCCEEEEEEECCCCCCCCCCCCCCHHHCCCCCCCCEEEEEECCCCCCCCCCCCEEHHHHC
GITDIVLTGIATNVGVESTAREAYENNYNVVIVSDAVSTWSTDAQTFALTQIFPKLGQVA
CCCEEEEEHHHCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCHH
TAADVEAALETQQQR
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]