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The map label for this gene is insF1 [C]

Identifier: 53723163

GI number: 53723163

Start: 2907228

End: 2908088

Strand: Reverse

Name: insF1 [C]

Synonym: BPSS2148

Alternate gene names: 53723163

Gene position: 2908088-2907228 (Counterclockwise)

Preceding gene: 53723164

Following gene: 53723162

Centisome position: 91.65

GC content: 59.81

Gene sequence:

>861_bases
GTGATCCAGGCGATGGAGAAGGCATACCCGGTAGCGCTGATGTGTCGACTGGCTGGTGTAGCACGCAGCAGCTATTACGC
ATGGAGGTCGCGCCAAGGCAGATCCAATCGCGACGCGACGGTGCTGGAAGCGGTGCGCCGTATTCATGAGGAGACTCGTC
GAAGCTACGGCAGCAGGAGGATGTCGCAAGCGTTGCGCTTGCTCGGACACAACGTAGGACGTTATCGGGCACGATCGTTG
ATGCGTCAGGCCCGGCTGGTGCGGTCTAAGCGCGTACATCGTTATCGAGCGGCTCAGGCCGAGAGTCTGATTGCGCCGAA
TCTGCTTGCACGACGATTCGATCCGGCGCAGCGCGATCAGGTATGGGTGGGCGACATCACCTTTGTACAGACTAGGCAGG
GATGGCTCTACGTGGCCGTGGTCATGGATCTGTACGCGCGCCGCGTGGTGGGCTGGGCGTTTAGTCAGCACGCGGACACC
GACTTGGCACTAAAGGCATTAAGACGGGCCTACGATCATCGTCGTCCGCCACCAGGCCTGATGTTCCATTCGGATCAGGG
CTGCCAATACACGAGCACGCGCTTTCTCGCCGAGCTGCGCGCCCGTGGCACGATCCAGAGCATGAGTCGGCGCGGCAACT
GTTGGGACAACGCGGTGGTCGAGCGCTTCTTCCGAAGCCTCAAAAATGAATGGATCGGCGACCAGTTGTACGTCGATCAC
CGCCATGCAGAGCAAGACATCACTGATTATCTGGTCGATTTTTACAACCATCGTCGCCTTCACTCGGCTGCGAAGGGACT
GCCGCCAGCGCGTTTCGAAGCGCTCGCAGCCTATCCCGGAGCAGTGTCCAAAGTTGCTTGA

Upstream 100 bases:

>100_bases
TCAAGGAGCTAGAGGCCCGCGTAGCCGAACTCGAACGGGAGCGTGAAGTTTTAAAAAAATCCACGGCCTTCTTCGTCAAG
GAGCTCGAACGCTCCTGGAA

Downstream 100 bases:

>100_bases
CCACTTCAGCTGAGGTGGGTGGACGAGAGCGGGCTGTCGGTGCTGGCGGCGGACAATCACGCGGTGGAGGAGAGGCCGGG
GGTGTTGAAGGCGAGGGAGA

Product: IS element protein

Products: NA

Alternate protein names: ISO-S3 31 kDa protein [H]

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MIQAMEKAYPVALMCRLAGVARSSYYAWRSRQGRSNRDATVLEAVRRIHEETRRSYGSRRMSQALRLLGHNVGRYRARSL
MRQARLVRSKRVHRYRAAQAESLIAPNLLARRFDPAQRDQVWVGDITFVQTRQGWLYVAVVMDLYARRVVGWAFSQHADT
DLALKALRRAYDHRRPPPGLMFHSDQGCQYTSTRFLAELRARGTIQSMSRRGNCWDNAVVERFFRSLKNEWIGDQLYVDH
RHAEQDITDYLVDFYNHRRLHSAAKGLPPARFEALAAYPGAVSKVA

Sequences:

>Translated_286_residues
MIQAMEKAYPVALMCRLAGVARSSYYAWRSRQGRSNRDATVLEAVRRIHEETRRSYGSRRMSQALRLLGHNVGRYRARSL
MRQARLVRSKRVHRYRAAQAESLIAPNLLARRFDPAQRDQVWVGDITFVQTRQGWLYVAVVMDLYARRVVGWAFSQHADT
DLALKALRRAYDHRRPPPGLMFHSDQGCQYTSTRFLAELRARGTIQSMSRRGNCWDNAVVERFFRSLKNEWIGDQLYVDH
RHAEQDITDYLVDFYNHRRLHSAAKGLPPARFEALAAYPGAVSKVA
>Mature_286_residues
MIQAMEKAYPVALMCRLAGVARSSYYAWRSRQGRSNRDATVLEAVRRIHEETRRSYGSRRMSQALRLLGHNVGRYRARSL
MRQARLVRSKRVHRYRAAQAESLIAPNLLARRFDPAQRDQVWVGDITFVQTRQGWLYVAVVMDLYARRVVGWAFSQHADT
DLALKALRRAYDHRRPPPGLMFHSDQGCQYTSTRFLAELRARGTIQSMSRRGNCWDNAVVERFFRSLKNEWIGDQLYVDH
RHAEQDITDYLVDFYNHRRLHSAAKGLPPARFEALAAYPGAVSKVA

Specific function: Involved in the transposition of the insertion sequence is3 [C]

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=244, Percent_Identity=32.3770491803279, Blast_Score=127, Evalue=2e-29,
Organism=Escherichia coli, GI1788405, Length=283, Percent_Identity=35.3356890459364, Blast_Score=162, Evalue=3e-41,
Organism=Escherichia coli, GI1787263, Length=283, Percent_Identity=35.3356890459364, Blast_Score=162, Evalue=3e-41,
Organism=Escherichia coli, GI1786753, Length=283, Percent_Identity=35.3356890459364, Blast_Score=162, Evalue=3e-41,
Organism=Escherichia coli, GI1786570, Length=283, Percent_Identity=35.3356890459364, Blast_Score=162, Evalue=3e-41,
Organism=Escherichia coli, GI1786490, Length=283, Percent_Identity=35.3356890459364, Blast_Score=162, Evalue=3e-41,
Organism=Escherichia coli, GI1789981, Length=280, Percent_Identity=30.7142857142857, Blast_Score=145, Evalue=2e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 33167; Mature: 33167

Theoretical pI: Translated: 11.27; Mature: 11.27

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQAMEKAYPVALMCRLAGVARSSYYAWRSRQGRSNRDATVLEAVRRIHEETRRSYGSRR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
MSQALRLLGHNVGRYRARSLMRQARLVRSKRVHRYRAAQAESLIAPNLLARRFDPAQRDQ
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
VWVGDITFVQTRQGWLYVAVVMDLYARRVVGWAFSQHADTDLALKALRRAYDHRRPPPGL
EEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC
MFHSDQGCQYTSTRFLAELRARGTIQSMSRRGNCWDNAVVERFFRSLKNEWIGDQLYVDH
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHEECH
RHAEQDITDYLVDFYNHRRLHSAAKGLPPARFEALAAYPGAVSKVA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHCC
>Mature Secondary Structure
MIQAMEKAYPVALMCRLAGVARSSYYAWRSRQGRSNRDATVLEAVRRIHEETRRSYGSRR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
MSQALRLLGHNVGRYRARSLMRQARLVRSKRVHRYRAAQAESLIAPNLLARRFDPAQRDQ
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
VWVGDITFVQTRQGWLYVAVVMDLYARRVVGWAFSQHADTDLALKALRRAYDHRRPPPGL
EEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC
MFHSDQGCQYTSTRFLAELRARGTIQSMSRRGNCWDNAVVERFFRSLKNEWIGDQLYVDH
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHEECH
RHAEQDITDYLVDFYNHRRLHSAAKGLPPARFEALAAYPGAVSKVA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2824781 [H]