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The map label for this gene is oppC

Identifier: 53723155

GI number: 53723155

Start: 2896620

End: 2897522

Strand: Reverse

Name: oppC

Synonym: BPSS2139

Alternate gene names: 53723155

Gene position: 2897522-2896620 (Counterclockwise)

Preceding gene: 53723156

Following gene: 53723154

Centisome position: 91.32

GC content: 69.55

Gene sequence:

>903_bases
ATGACGCCTGTTACCTCTTCGATCGAGCTGCCGACGGCGGCCGACGCGCCGCCGCGCTCGCGCACGCCGCTCGGGCTTGC
CGCGCGGCGCTTCGTGCGCAACCGCGCGGCGCTCGCGAGCCTCGCGGCGCTCGCGGTGATCGCGCTCATGTGCTTCGTCG
GGCCGCTGCTCCTGCCCAACGATCCGGCCGCGAGCGACTGGTCGTCGATCAGTCTCGCGCCGACGCTCGCCAACGCGCAT
TGGTTCGGCACCGACGAGCTCGGCCGCGATCTGCTCGTGCGCACGCTGATCGGCGGGCGCGTGTCGCTCGAAGTCGGCCT
GCTCGGCACGTTCGTGTCGGGGCTGTTCGGCGTCGCGTGGGGCGCGATCGCGGGCTTCGCCGGCGGCCGCGTCGACGCGG
CGATGATGCGCGTCGTCGACATGATGTATGCGATTCCGTATCTGCTGATCGCGATCCTGATGATGACGCTGTTCGGGCGT
TCGTTCATTCTCGTCGTGCTGACGATCAGTGCGTTCTCTTGGCTCGACATGGCGCGCGTCGTGCGCGGCCAGACGCTTTC
GCTGCGCACGCGCGAGTTCGTCGATGCGGCGCGCGCGATCGGCGTCACGCCGGCGGCGATCGTGCGGCGCCACATCGTGC
CGAATCTGCTCGGCGTGGTGGTGGTCTACGCGACCGTCAGCGTGCCGGCGATCGTGCTGACCGAATCGGTGCTGTCGTTT
CTCGGGCTCGGCGTGCAGGAGCCGATGACGAGCTGGGGCGTGCTGATCCAGGACGGCGCGCAGAAGCTCGAGGCGATGCC
GTGGCTGCTGCTCGCGCCCGCCGTGATGCTGTGTGTGACGCTCTACTGCGTGAACTTCGTCGGCGACGGCCTGCGCGACG
CACTCGATCCGAAGGACCGCTGA

Upstream 100 bases:

>100_bases
TCGTCGTGCTGACGACCGTCTGCGCGGTGCTGTTCAACCTGCTGGTCGATCTCGCGTACGCGTGGCTCGATCCGCGCATC
CGCTATTGAGGGGCGACGCG

Downstream 100 bases:

>100_bases
GATGGCGCTACTCGAAGTCAAGGACCTCGGTGTGCGCTTCACGCGCCGTGAAGGCGAGCCCGTCGACGCGGTATCGGGCG
TGTCGTTCTCGCTAGAGGCG

Product: oligopeptide transport system permease protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MTPVTSSIELPTAADAPPRSRTPLGLAARRFVRNRAALASLAALAVIALMCFVGPLLLPNDPAASDWSSISLAPTLANAH
WFGTDELGRDLLVRTLIGGRVSLEVGLLGTFVSGLFGVAWGAIAGFAGGRVDAAMMRVVDMMYAIPYLLIAILMMTLFGR
SFILVVLTISAFSWLDMARVVRGQTLSLRTREFVDAARAIGVTPAAIVRRHIVPNLLGVVVVYATVSVPAIVLTESVLSF
LGLGVQEPMTSWGVLIQDGAQKLEAMPWLLLAPAVMLCVTLYCVNFVGDGLRDALDPKDR

Sequences:

>Translated_300_residues
MTPVTSSIELPTAADAPPRSRTPLGLAARRFVRNRAALASLAALAVIALMCFVGPLLLPNDPAASDWSSISLAPTLANAH
WFGTDELGRDLLVRTLIGGRVSLEVGLLGTFVSGLFGVAWGAIAGFAGGRVDAAMMRVVDMMYAIPYLLIAILMMTLFGR
SFILVVLTISAFSWLDMARVVRGQTLSLRTREFVDAARAIGVTPAAIVRRHIVPNLLGVVVVYATVSVPAIVLTESVLSF
LGLGVQEPMTSWGVLIQDGAQKLEAMPWLLLAPAVMLCVTLYCVNFVGDGLRDALDPKDR
>Mature_299_residues
TPVTSSIELPTAADAPPRSRTPLGLAARRFVRNRAALASLAALAVIALMCFVGPLLLPNDPAASDWSSISLAPTLANAHW
FGTDELGRDLLVRTLIGGRVSLEVGLLGTFVSGLFGVAWGAIAGFAGGRVDAAMMRVVDMMYAIPYLLIAILMMTLFGRS
FILVVLTISAFSWLDMARVVRGQTLSLRTREFVDAARAIGVTPAAIVRRHIVPNLLGVVVVYATVSVPAIVLTESVLSFL
GLGVQEPMTSWGVLIQDGAQKLEAMPWLLLAPAVMLCVTLYCVNFVGDGLRDALDPKDR

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787498, Length=274, Percent_Identity=54.014598540146, Blast_Score=281, Evalue=3e-77,
Organism=Escherichia coli, GI1787054, Length=283, Percent_Identity=33.5689045936396, Blast_Score=180, Evalue=1e-46,
Organism=Escherichia coli, GI1787760, Length=250, Percent_Identity=35.2, Blast_Score=159, Evalue=2e-40,
Organism=Escherichia coli, GI1789889, Length=241, Percent_Identity=37.344398340249, Blast_Score=147, Evalue=9e-37,
Organism=Escherichia coli, GI1789964, Length=285, Percent_Identity=34.0350877192982, Blast_Score=129, Evalue=3e-31,
Organism=Escherichia coli, GI1788505, Length=223, Percent_Identity=31.8385650224215, Blast_Score=125, Evalue=5e-30,
Organism=Escherichia coli, GI1787549, Length=287, Percent_Identity=27.8745644599303, Blast_Score=102, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31972; Mature: 31841

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPVTSSIELPTAADAPPRSRTPLGLAARRFVRNRAALASLAALAVIALMCFVGPLLLPN
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DPAASDWSSISLAPTLANAHWFGTDELGRDLLVRTLIGGRVSLEVGLLGTFVSGLFGVAW
CCCCCCCCCCEECHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHH
GAIAGFAGGRVDAAMMRVVDMMYAIPYLLIAILMMTLFGRSFILVVLTISAFSWLDMARV
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
VRGQTLSLRTREFVDAARAIGVTPAAIVRRHIVPNLLGVVVVYATVSVPAIVLTESVLSF
HCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGLGVQEPMTSWGVLIQDGAQKLEAMPWLLLAPAVMLCVTLYCVNFVGDGLRDALDPKDR
HCCCHHCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TPVTSSIELPTAADAPPRSRTPLGLAARRFVRNRAALASLAALAVIALMCFVGPLLLPN
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC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PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]