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The map label for this gene is dsdA

Identifier: 53723129

GI number: 53723129

Start: 2864045

End: 2865382

Strand: Reverse

Name: dsdA

Synonym: BPSS2116

Alternate gene names: 53723129

Gene position: 2865382-2864045 (Counterclockwise)

Preceding gene: 53723131

Following gene: 53723127

Centisome position: 90.3

GC content: 72.57

Gene sequence:

>1338_bases
ATGCCAGTCGGCCGTTCGCTTTCGCTCGATCCCAATCTATTAGCTCAGCTTCAATCGCATTCGCCGACGCTGTGGCTCAA
TCCGCATCAAGGCATGCCGCTGCCGGACTTCGCGCCGACCGCCGCGGATCTCGCCGATGCCGACGCGCGCCTGCGCCGCT
GCGCCGGCTTGCTGGCCGAGCTATTTGCCGAACTGCGGCCGTCGGGCGGGCTCATCGCATCGCCGTTGCAGCCGGCCGAG
CCGTTGAAGCGCGCCGCTCGAGCCGGCCATGCGCAGGCGGGCGCGTGGTACGTCAAGCGCGACGATGCATTGCCGGTGGC
CGGCTCGATCAAGGCGCGCGGCGGTTTTCACGAGGTGCTCGCGCTCGCCGAATCGATCGCCGAGCGGCACGGCCTCGCGG
GCGCCGACACCGACCGGCGCGCGCTCGCGAGCGGCGCGGCGCGTGCGCGGTTCGCGCGTCATACGGTGATGGTCGGCAGC
ACCGGCAATCTCGGCTTGAGCATCGGGATGCTCGCGTCGGCGCTCGGGTTCCGCACCGTCGTGCATATGTCGGCCGATGC
GAAGGCATGGAAGAAGGCGCGCCTGCGCACGCGCGGCGTGGAAGTCGTCGAGCATGCGGGCGATTATGCGAAAGCGGTGG
ACGCCGGGCGGCGGCAGGCCGCCGGGATGCCGTGCTGCCATTTCGTCGACGATGAAGGCTCGCGGATGCTGTTCCTCGGC
TACGCGACGGCCGCCGCCGAGCTCGCCGCGCAACTCGCGCAGGCGGGCCGCCCGGTCGACGCGCGCCATCCGCTGTTCGT
CCATCTTCCGTGCGGCGTCGGCGGCGCGCCGGGCGGCATCGTGTACGGGCTGAAGGCGCTGTACGGCGAGCACGTGCATG
CGTTCGTCGCCGAGCCCACCGCGTCGCCTTGCGTGCTCGTGCAGCTCGCGGGCGACGCCGCGCATCCGCGCTCCGTCTAC
GACATCGGCCTCGACAATCGGACCGAGGCCGACGGGCTGGCGGTCGCGCAGGCGTCGCCTCTCGCCGCTGCGCTGTTGCG
CGCGCAGGCCGCCGGCGCGTTCACCGTCGACGATCGCCAGTTGTTCGCCCATTTGCTCGACGCGCGCGAGCGGCTCGGCA
TCGACCTCGAGCCGTCCGCGGCGGCCGCGTTCGGCGGCCCGGCGTGGATCGCGGGATCGGACGCGGGGCGCGCCTATCTG
CGCGGCCGGGGCATCGATCCGGATGCGGCGACGCACGTGATCTGGGCCACCGGCGGCTCGCTCGTGCCGGCGCAAGAGCA
TCGGCGCTTTCAGGCGCATGCGCGCGCGCAGCGGCAGGTGGGCGGCGCGGGCGCGTGA

Upstream 100 bases:

>100_bases
CCATTAGCGTGGCTTATGCATGGGCAAGAATTGATCGCTTCTTCGCACGGCCCGTGGAGCCGTACGATGAGGGCTTGTCC
ATCACATTTTATTTCAGATC

Downstream 100 bases:

>100_bases
GGAGGGGGGATTCGTGAAGTCGGAGTTGAAGACGAGGACGAAGGCGAAGGCGAAGGCGAAGACGGAGACAGAGACAGAGA
CAGAGACAGAGACAGAGACA

Product: D-serine dehydratase

Products: NA

Alternate protein names: D-serine deaminase; DSD [H]

Number of amino acids: Translated: 445; Mature: 444

Protein sequence:

>445_residues
MPVGRSLSLDPNLLAQLQSHSPTLWLNPHQGMPLPDFAPTAADLADADARLRRCAGLLAELFAELRPSGGLIASPLQPAE
PLKRAARAGHAQAGAWYVKRDDALPVAGSIKARGGFHEVLALAESIAERHGLAGADTDRRALASGAARARFARHTVMVGS
TGNLGLSIGMLASALGFRTVVHMSADAKAWKKARLRTRGVEVVEHAGDYAKAVDAGRRQAAGMPCCHFVDDEGSRMLFLG
YATAAAELAAQLAQAGRPVDARHPLFVHLPCGVGGAPGGIVYGLKALYGEHVHAFVAEPTASPCVLVQLAGDAAHPRSVY
DIGLDNRTEADGLAVAQASPLAAALLRAQAAGAFTVDDRQLFAHLLDARERLGIDLEPSAAAAFGGPAWIAGSDAGRAYL
RGRGIDPDAATHVIWATGGSLVPAQEHRRFQAHARAQRQVGGAGA

Sequences:

>Translated_445_residues
MPVGRSLSLDPNLLAQLQSHSPTLWLNPHQGMPLPDFAPTAADLADADARLRRCAGLLAELFAELRPSGGLIASPLQPAE
PLKRAARAGHAQAGAWYVKRDDALPVAGSIKARGGFHEVLALAESIAERHGLAGADTDRRALASGAARARFARHTVMVGS
TGNLGLSIGMLASALGFRTVVHMSADAKAWKKARLRTRGVEVVEHAGDYAKAVDAGRRQAAGMPCCHFVDDEGSRMLFLG
YATAAAELAAQLAQAGRPVDARHPLFVHLPCGVGGAPGGIVYGLKALYGEHVHAFVAEPTASPCVLVQLAGDAAHPRSVY
DIGLDNRTEADGLAVAQASPLAAALLRAQAAGAFTVDDRQLFAHLLDARERLGIDLEPSAAAAFGGPAWIAGSDAGRAYL
RGRGIDPDAATHVIWATGGSLVPAQEHRRFQAHARAQRQVGGAGA
>Mature_444_residues
PVGRSLSLDPNLLAQLQSHSPTLWLNPHQGMPLPDFAPTAADLADADARLRRCAGLLAELFAELRPSGGLIASPLQPAEP
LKRAARAGHAQAGAWYVKRDDALPVAGSIKARGGFHEVLALAESIAERHGLAGADTDRRALASGAARARFARHTVMVGST
GNLGLSIGMLASALGFRTVVHMSADAKAWKKARLRTRGVEVVEHAGDYAKAVDAGRRQAAGMPCCHFVDDEGSRMLFLGY
ATAAAELAAQLAQAGRPVDARHPLFVHLPCGVGGAPGGIVYGLKALYGEHVHAFVAEPTASPCVLVQLAGDAAHPRSVYD
IGLDNRTEADGLAVAQASPLAAALLRAQAAGAFTVDDRQLFAHLLDARERLGIDLEPSAAAAFGGPAWIAGSDAGRAYLR
GRGIDPDAATHVIWATGGSLVPAQEHRRFQAHARAQRQVGGAGA

Specific function: Unknown

COG id: COG3048

COG function: function code E; D-serine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the serine/threonine dehydratase family. DsdA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788708, Length=431, Percent_Identity=44.7795823665893, Blast_Score=329, Evalue=2e-91,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011780
- InterPro:   IPR001926 [H]

Pfam domain/function: PF00291 PALP [H]

EC number: =4.3.1.18 [H]

Molecular weight: Translated: 46320; Mature: 46189

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVGRSLSLDPNLLAQLQSHSPTLWLNPHQGMPLPDFAPTAADLADADARLRRCAGLLAE
CCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LFAELRPSGGLIASPLQPAEPLKRAARAGHAQAGAWYVKRDDALPVAGSIKARGGFHEVL
HHHHHCCCCCEEECCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHH
ALAESIAERHGLAGADTDRRALASGAARARFARHTVMVGSTGNLGLSIGMLASALGFRTV
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHE
VHMSADAKAWKKARLRTRGVEVVEHAGDYAKAVDAGRRQAAGMPCCHFVDDEGSRMLFLG
EEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEE
YATAAAELAAQLAQAGRPVDARHPLFVHLPCGVGGAPGGIVYGLKALYGEHVHAFVAEPT
HHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCHHEEEEECCC
ASPCVLVQLAGDAAHPRSVYDIGLDNRTEADGLAVAQASPLAAALLRAQAAGAFTVDDRQ
CCCEEEEEECCCCCCCCCEEEECCCCCCCCCCEEEECCCHHHHHHHHHHCCCCEEECHHH
LFAHLLDARERLGIDLEPSAAAAFGGPAWIAGSDAGRAYLRGRGIDPDAATHVIWATGGS
HHHHHHHHHHHCCCCCCCCCHHCCCCCEEEECCCCCCCEEECCCCCCCCCCEEEEECCCC
LVPAQEHRRFQAHARAQRQVGGAGA
CCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PVGRSLSLDPNLLAQLQSHSPTLWLNPHQGMPLPDFAPTAADLADADARLRRCAGLLAE
CCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LFAELRPSGGLIASPLQPAEPLKRAARAGHAQAGAWYVKRDDALPVAGSIKARGGFHEVL
HHHHHCCCCCEEECCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHH
ALAESIAERHGLAGADTDRRALASGAARARFARHTVMVGSTGNLGLSIGMLASALGFRTV
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHE
VHMSADAKAWKKARLRTRGVEVVEHAGDYAKAVDAGRRQAAGMPCCHFVDDEGSRMLFLG
EEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEE
YATAAAELAAQLAQAGRPVDARHPLFVHLPCGVGGAPGGIVYGLKALYGEHVHAFVAEPT
HHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCHHEEEEECCC
ASPCVLVQLAGDAAHPRSVYDIGLDNRTEADGLAVAQASPLAAALLRAQAAGAFTVDDRQ
CCCEEEEEECCCCCCCCCEEEECCCCCCCCCCEEEECCCHHHHHHHHHHCCCCEEECHHH
LFAHLLDARERLGIDLEPSAAAAFGGPAWIAGSDAGRAYLRGRGIDPDAATHVIWATGGS
HHHHHHHHHHHCCCCCCCCCHHCCCCCEEEECCCCCCCEEECCCCCCCCCCEEEEECCCC
LVPAQEHRRFQAHARAQRQVGGAGA
CCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA