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The map label for this gene is 53723120

Identifier: 53723120

GI number: 53723120

Start: 2852544

End: 2853932

Strand: Reverse

Name: 53723120

Synonym: BPSS2106

Alternate gene names: NA

Gene position: 2853932-2852544 (Counterclockwise)

Preceding gene: 53723121

Following gene: 53723119

Centisome position: 89.94

GC content: 70.55

Gene sequence:

>1389_bases
TTGTCCGCGACCCCCGCTGCGGCGTTGCGCCAGCGCGTGATCTGGACCGAGGGCATGTTCCTGCGGCCGCAGCATTTCCA
GCAGCTCGAGCGGCACTGGGAGCGCTACGTCGGCATGCGCTGCCTGCCGCTGCAAGGCTTCTACTGGGGCTACGACGAGT
TGCAGATCGATCGCGAGCTGCTCGCGCTCGGCAAGGTCGCGCTGCTCGCCGCGACCGGCGTGATGCGCGACGGCACGCCG
TTCGACCTGTCGCATCCGGACGACCGGCCCGAGCCGCTCGACGTGCCCGCCGACGCGAAGGATCAGCTCGTCGTGCTCGC
GCTGCCGCTGTGGCGCGGCGGCGCGCAGGAGGTGTCGTTCGGCGCGGGCGGCAACGGCGAAGGCCGCGGCGGCGACGGCA
ACGCGCACGCGGGCTTCGCGCGCTACGTCGTGCGCGAATACGAAGTCGCCGACGCGAACGAGGTCGCGCTCGGCCCCGCG
CTATTGCAGACCGGCCGCCTGAACGTGCGCCTGATGCTCGAATCCGAATTGACGGGCGACTGGCAGGCGCTCGGCGTCGC
GCGCGTCGTCGAGCGGCGCACCGATGGGCGGCTGCTCGTCGACGACGGCTACATTCCGCCGCGGCTCGTCGCGCAGCGCG
ATCCGGTGCTGCTGCGCCACACGCGCGAGCTGCACGGGCTGCTCACGCAACGCAGCGAGGCGCTCGGCGAGCGCCTGTCG
GAGCCGGGGCGCGGCGGCGTGTCCGAAGTCGCCGATTTCCTGCTGCTGCAACTCGTCAACCGCTATCTGGCGCTCACGTG
GCACGCGCAGCAGGATGTCGCCGCGCACCCGGAGACGCTGTTCTGCGATTGGCTGAAGCTCGCGTGCGACCTGAGCACAT
TCACCGCGGCCGGCCGCCGGCCGCAGTCGCTCGCGGTCTACCGGCACGACGATCTGCGCGCGAGCTTCGGCGAGCTGATG
GCCGAGCTGCGCCGCTCATTGTCGACGGTGCTCGAGCAGAACGCGATCCAGATCGAGCTGCGCGACGTGGGCAACGGCAT
GAAGGTCGCGACGATCGCCGATCCGGCGCTGCGCGACACGGCGGGCTTCGTGCTCGCCGTGCGCGCCGACGTGCCGGCCG
ACAGCCTGCGCGCGCGCTTTCCCGCGCAGGCGAAGCTCGGTCCCGTCGAGCGCATTCGCGATCTCGTGCAGTTGCAACTG
CCGGGCATCGCGATGCGGCAGTTGCCCGTCGCGCCGCGGCAGATTCCGTATCACGCGGGCCACACGTACTTCGAGATCGA
CAAGGGCGGCGAGATGTGGAAACAGCTCGAACGCTCGGGCGGCCTCGCATTTCATTTCGCCGGCGAATTCCCGGGACTCT
CGATGGAGTTCTGGGCGATTCGCGGGTGA

Upstream 100 bases:

>100_bases
GGCAAACCTCGCCGGGCGAGATGAAGCTGCAGGTCGCCGTGAAGAACGGCGGCATCGGCCTCGGCGGCGATTCGCGAGTA
CGCCAATGAACGAGCCGGTA

Downstream 100 bases:

>100_bases
GGGCGATATCGCGCGATGAACACTTCTTCCGATTCGTTCTCGGCCGGCTCGGGCGGATTCGTGCCGCCGAATCCGGGCGG
CGCGCACCCGGCCGCCGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Protein ImpJ/VasE; Conserved Protein; Replication/Virulence Associated Protein; Type VI Secretion System Protein EvpM; Protein ImpJ; Type VI Secretion System Protein; Type VI Secretion System Protein ImpJ; Type VI Secretion; Type VI Secretion System Core Protein; T6ss M; Type VI Secretion Protein VasE; Temperature-Dependent Protein Secretion ImpJ

Number of amino acids: Translated: 462; Mature: 461

Protein sequence:

>462_residues
MSATPAAALRQRVIWTEGMFLRPQHFQQLERHWERYVGMRCLPLQGFYWGYDELQIDRELLALGKVALLAATGVMRDGTP
FDLSHPDDRPEPLDVPADAKDQLVVLALPLWRGGAQEVSFGAGGNGEGRGGDGNAHAGFARYVVREYEVADANEVALGPA
LLQTGRLNVRLMLESELTGDWQALGVARVVERRTDGRLLVDDGYIPPRLVAQRDPVLLRHTRELHGLLTQRSEALGERLS
EPGRGGVSEVADFLLLQLVNRYLALTWHAQQDVAAHPETLFCDWLKLACDLSTFTAAGRRPQSLAVYRHDDLRASFGELM
AELRRSLSTVLEQNAIQIELRDVGNGMKVATIADPALRDTAGFVLAVRADVPADSLRARFPAQAKLGPVERIRDLVQLQL
PGIAMRQLPVAPRQIPYHAGHTYFEIDKGGEMWKQLERSGGLAFHFAGEFPGLSMEFWAIRG

Sequences:

>Translated_462_residues
MSATPAAALRQRVIWTEGMFLRPQHFQQLERHWERYVGMRCLPLQGFYWGYDELQIDRELLALGKVALLAATGVMRDGTP
FDLSHPDDRPEPLDVPADAKDQLVVLALPLWRGGAQEVSFGAGGNGEGRGGDGNAHAGFARYVVREYEVADANEVALGPA
LLQTGRLNVRLMLESELTGDWQALGVARVVERRTDGRLLVDDGYIPPRLVAQRDPVLLRHTRELHGLLTQRSEALGERLS
EPGRGGVSEVADFLLLQLVNRYLALTWHAQQDVAAHPETLFCDWLKLACDLSTFTAAGRRPQSLAVYRHDDLRASFGELM
AELRRSLSTVLEQNAIQIELRDVGNGMKVATIADPALRDTAGFVLAVRADVPADSLRARFPAQAKLGPVERIRDLVQLQL
PGIAMRQLPVAPRQIPYHAGHTYFEIDKGGEMWKQLERSGGLAFHFAGEFPGLSMEFWAIRG
>Mature_461_residues
SATPAAALRQRVIWTEGMFLRPQHFQQLERHWERYVGMRCLPLQGFYWGYDELQIDRELLALGKVALLAATGVMRDGTPF
DLSHPDDRPEPLDVPADAKDQLVVLALPLWRGGAQEVSFGAGGNGEGRGGDGNAHAGFARYVVREYEVADANEVALGPAL
LQTGRLNVRLMLESELTGDWQALGVARVVERRTDGRLLVDDGYIPPRLVAQRDPVLLRHTRELHGLLTQRSEALGERLSE
PGRGGVSEVADFLLLQLVNRYLALTWHAQQDVAAHPETLFCDWLKLACDLSTFTAAGRRPQSLAVYRHDDLRASFGELMA
ELRRSLSTVLEQNAIQIELRDVGNGMKVATIADPALRDTAGFVLAVRADVPADSLRARFPAQAKLGPVERIRDLVQLQLP
GIAMRQLPVAPRQIPYHAGHTYFEIDKGGEMWKQLERSGGLAFHFAGEFPGLSMEFWAIRG

Specific function: Unknown

COG id: COG3522

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51254; Mature: 51123

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSATPAAALRQRVIWTEGMFLRPQHFQQLERHWERYVGMRCLPLQGFYWGYDELQIDREL
CCCCHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHH
LALGKVALLAATGVMRDGTPFDLSHPDDRPEPLDVPADAKDQLVVLALPLWRGGAQEVSF
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEE
GAGGNGEGRGGDGNAHAGFARYVVREYEVADANEVALGPALLQTGRLNVRLMLESELTGD
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCEEEEEEECCCCCC
WQALGVARVVERRTDGRLLVDDGYIPPRLVAQRDPVLLRHTRELHGLLTQRSEALGERLS
HHHHHHHHHHHHCCCCEEEEECCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
EPGRGGVSEVADFLLLQLVNRYLALTWHAQQDVAAHPETLFCDWLKLACDLSTFTAAGRR
CCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
PQSLAVYRHDDLRASFGELMAELRRSLSTVLEQNAIQIELRDVGNGMKVATIADPALRDT
CCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCHHHCC
AGFVLAVRADVPADSLRARFPAQAKLGPVERIRDLVQLQLPGIAMRQLPVAPRQIPYHAG
CCEEEEEECCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCC
HTYFEIDKGGEMWKQLERSGGLAFHFAGEFPGLSMEFWAIRG
CEEEEECCCHHHHHHHHHCCCEEEEECCCCCCCCEEEEEECC
>Mature Secondary Structure 
SATPAAALRQRVIWTEGMFLRPQHFQQLERHWERYVGMRCLPLQGFYWGYDELQIDREL
CCCHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHH
LALGKVALLAATGVMRDGTPFDLSHPDDRPEPLDVPADAKDQLVVLALPLWRGGAQEVSF
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEE
GAGGNGEGRGGDGNAHAGFARYVVREYEVADANEVALGPALLQTGRLNVRLMLESELTGD
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCEEEEEEECCCCCC
WQALGVARVVERRTDGRLLVDDGYIPPRLVAQRDPVLLRHTRELHGLLTQRSEALGERLS
HHHHHHHHHHHHCCCCEEEEECCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
EPGRGGVSEVADFLLLQLVNRYLALTWHAQQDVAAHPETLFCDWLKLACDLSTFTAAGRR
CCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
PQSLAVYRHDDLRASFGELMAELRRSLSTVLEQNAIQIELRDVGNGMKVATIADPALRDT
CCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCHHHCC
AGFVLAVRADVPADSLRARFPAQAKLGPVERIRDLVQLQLPGIAMRQLPVAPRQIPYHAG
CCEEEEEECCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCC
HTYFEIDKGGEMWKQLERSGGLAFHFAGEFPGLSMEFWAIRG
CEEEEECCCHHHHHHHHHCCCEEEEECCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA