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The map label for this gene is 53723114

Identifier: 53723114

GI number: 53723114

Start: 2842043

End: 2842621

Strand: Reverse

Name: 53723114

Synonym: BPSS2100

Alternate gene names: NA

Gene position: 2842621-2842043 (Counterclockwise)

Preceding gene: 53723115

Following gene: 53723113

Centisome position: 89.59

GC content: 66.15

Gene sequence:

>579_bases
ATGACGAGCAAGTACAAGGCTTCGGCCAGCGGACAGAAATTCATCGCGCGCAACCGCGCGCCGCGCGTGCAGATCGAGTA
CGACGTCGAGACCTACGGCGCCGAGCGCAAGGTCCAACTGCCGTTCGTGATGGGCGTGATCGCGGATCTCGCGGGCAAGC
GGGCCGAGCCGCTGCCGGACTTGCCGGAGCGCAAGTTCCTCGAAATCGACGTCGACAATTTCGACGAGCGGATGAAATCG
ATCGCGCCGCGCGTCGCGTTCCAGGTGCCGAACACGCTGTCGGGAGACGGCATGCTGAGCGTCGACATGACGTTCGAGAG
CATCGACGATTTCTCGCCCGCCGCGATCGCGCGCAACGTCGACGCGTTGCGGCGCCTGCTCGACGCGCGCACCGAGCTGT
CGAACCTGCTGTCGTACATGGACGGCAAGCACGGCGCCGAGCAACTGATCGAAAACGCGATCAACGATCCGGCACTGCTG
GCCTCGCTCGTGCGGCAGCCGCTCGCGGCGGACGCCGAAGGCGGCGCGCGGCAGCCCGTGACCGGCACCGAAGACGACCC
GGAGATTCGCCATGAATGA

Upstream 100 bases:

>100_bases
CGAAGCTCGACTTGCTGAGCGGCCAGCGCAACGAATGATGCGGGGGCGCCGCTGCGGGCGGCGGACATGATCGACGCAAC
CTGATGCGAAGGAGCAGACG

Downstream 100 bases:

>100_bases
ACGTGCCCAAACCCAGGCCGACACGCGCGCCGCCGCCCAGCCCGTGGTCGCGCGCGACGAGTTCGCCGCGCTGCTGCAAA
AGGAGTTCAAGCCGAAGACG

Product: hypothetical protein

Products: NA

Alternate protein names: T6ss S; Type VI Secretion Protein Family; Conserved Protein; Cytoplasmic Protein SciH; Cytoplasmic Protein; Type VI Secretion System Protein; Protein ImpB; Type VI Secretion; Type VI Secretion System Core Protein; Type VI Secretion System Protein ImpB

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MTSKYKASASGQKFIARNRAPRVQIEYDVETYGAERKVQLPFVMGVIADLAGKRAEPLPDLPERKFLEIDVDNFDERMKS
IAPRVAFQVPNTLSGDGMLSVDMTFESIDDFSPAAIARNVDALRRLLDARTELSNLLSYMDGKHGAEQLIENAINDPALL
ASLVRQPLAADAEGGARQPVTGTEDDPEIRHE

Sequences:

>Translated_192_residues
MTSKYKASASGQKFIARNRAPRVQIEYDVETYGAERKVQLPFVMGVIADLAGKRAEPLPDLPERKFLEIDVDNFDERMKS
IAPRVAFQVPNTLSGDGMLSVDMTFESIDDFSPAAIARNVDALRRLLDARTELSNLLSYMDGKHGAEQLIENAINDPALL
ASLVRQPLAADAEGGARQPVTGTEDDPEIRHE
>Mature_191_residues
TSKYKASASGQKFIARNRAPRVQIEYDVETYGAERKVQLPFVMGVIADLAGKRAEPLPDLPERKFLEIDVDNFDERMKSI
APRVAFQVPNTLSGDGMLSVDMTFESIDDFSPAAIARNVDALRRLLDARTELSNLLSYMDGKHGAEQLIENAINDPALLA
SLVRQPLAADAEGGARQPVTGTEDDPEIRHE

Specific function: Unknown

COG id: COG3516

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21171; Mature: 21040

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSKYKASASGQKFIARNRAPRVQIEYDVETYGAERKVQLPFVMGVIADLAGKRAEPLPD
CCCCCCCCCCCHHHHHHCCCCEEEEEECHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCCC
LPERKFLEIDVDNFDERMKSIAPRVAFQVPNTLSGDGMLSVDMTFESIDDFSPAAIARNV
CCCCCEEEECCCCHHHHHHHHHHHHEEECCCCCCCCCEEEEEEEHHHHCCCCHHHHHHHH
DALRRLLDARTELSNLLSYMDGKHGAEQLIENAINDPALLASLVRQPLAADAEGGARQPV
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCC
TGTEDDPEIRHE
CCCCCCCCCCCC
>Mature Secondary Structure 
TSKYKASASGQKFIARNRAPRVQIEYDVETYGAERKVQLPFVMGVIADLAGKRAEPLPD
CCCCCCCCCCHHHHHHCCCCEEEEEECHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCCC
LPERKFLEIDVDNFDERMKSIAPRVAFQVPNTLSGDGMLSVDMTFESIDDFSPAAIARNV
CCCCCEEEECCCCHHHHHHHHHHHHEEECCCCCCCCCEEEEEEEHHHHCCCCHHHHHHHH
DALRRLLDARTELSNLLSYMDGKHGAEQLIENAINDPALLASLVRQPLAADAEGGARQPV
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCC
TGTEDDPEIRHE
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA