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The map label for this gene is ycjP [C]

Identifier: 53723098

GI number: 53723098

Start: 2818504

End: 2819355

Strand: Reverse

Name: ycjP [C]

Synonym: BPSS2082

Alternate gene names: 53723098

Gene position: 2819355-2818504 (Counterclockwise)

Preceding gene: 53723099

Following gene: 53723097

Centisome position: 88.85

GC content: 53.64

Gene sequence:

>852_bases
ATGTTCCCCACACCGATTGCACAGGCGAGCCGCCCCGCTCAGTGGCTCTACCGCTTAACGGTTACAGTTGCGCTCGTCCT
CTGGCTATTGCCGCTGCTTGGAATTGCACTAACGTCAATCCGTGGCCCTGCTGATATTTTTGCGGGAAATTACTGGGGTT
GGCCGACCCAATGGCAGATCGTTGAGAACTATCGAGCAATTTTTTCAGAGACGCCTCTCGCACATTATCTCGTTAACACT
TGCCTGATCACCATTCCATCAGTAATCGGCGCCGTGGCACTGAGTTGCATGGCTGGCTTTGCGCTTGGCATCTACCGTTT
CAGATTGAACTTGCCGGTCTTCTTCCTTTTTTTGGCGGGCAACTTCGTGCCGTTTCAGATTCTGATGATTCCCGTACGTC
TCATGAGCCTTCGGCTCGGGCTCTATAATTCCGTACCAGGCCTTGTGTTGTTCCATGTGGCCTTCAACACAGGCTTCTGT
ACGTTCTTTATGCGCAATTTCATTCGAGAACTACCGCGCGAGCTTATCGAGGCCGCGCGTATGGATGGCGCCAGCGAATT
TCAGATCTTCTACAAAGTCGTGCTACCGCTTGTGCGGCCCGCAATGGCTGCGATTTCCGTTCTTGTGTTTACCTTTGTAT
GGAACGACTACTTCTGGGCCACTGTACTCGTGCAAGGTGATCACGCCATGCCGATCACCGCGGGACTAAAAACACTGAGT
GGCATTTGGGTCGCACAATGGCATCTCGTCGCGGCAGGTTCGCTTGTCGCGGCTCTCCCGCCCGTGCTTATTTTTTTCCT
CCGGCAACGATACTTCATTGCAGGCCTCACGATGGGGGCCACCAAGGGCTAG

Upstream 100 bases:

>100_bases
ATATGGCTCAGCCATCGCGTCGATCTTGTTTCTCATCATGCTGACGTACATCGGCTTCGTCCTCGTTCGCGTCTACAAGC
AGGAAAGGGGGGATGCCTGA

Downstream 100 bases:

>100_bases
ACGTATGTTCGACACAAAACTTATTCGATTGACTGGTTCAAATCTCAGCATCGCACTAGAGAAATCGGCCGATATGCCGC
CTGTATGGCGCTATTTTGGC

Product: ABC transporter system permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MFPTPIAQASRPAQWLYRLTVTVALVLWLLPLLGIALTSIRGPADIFAGNYWGWPTQWQIVENYRAIFSETPLAHYLVNT
CLITIPSVIGAVALSCMAGFALGIYRFRLNLPVFFLFLAGNFVPFQILMIPVRLMSLRLGLYNSVPGLVLFHVAFNTGFC
TFFMRNFIRELPRELIEAARMDGASEFQIFYKVVLPLVRPAMAAISVLVFTFVWNDYFWATVLVQGDHAMPITAGLKTLS
GIWVAQWHLVAAGSLVAALPPVLIFFLRQRYFIAGLTMGATKG

Sequences:

>Translated_283_residues
MFPTPIAQASRPAQWLYRLTVTVALVLWLLPLLGIALTSIRGPADIFAGNYWGWPTQWQIVENYRAIFSETPLAHYLVNT
CLITIPSVIGAVALSCMAGFALGIYRFRLNLPVFFLFLAGNFVPFQILMIPVRLMSLRLGLYNSVPGLVLFHVAFNTGFC
TFFMRNFIRELPRELIEAARMDGASEFQIFYKVVLPLVRPAMAAISVLVFTFVWNDYFWATVLVQGDHAMPITAGLKTLS
GIWVAQWHLVAAGSLVAALPPVLIFFLRQRYFIAGLTMGATKG
>Mature_283_residues
MFPTPIAQASRPAQWLYRLTVTVALVLWLLPLLGIALTSIRGPADIFAGNYWGWPTQWQIVENYRAIFSETPLAHYLVNT
CLITIPSVIGAVALSCMAGFALGIYRFRLNLPVFFLFLAGNFVPFQILMIPVRLMSLRLGLYNSVPGLVLFHVAFNTGFC
TFFMRNFIRELPRELIEAARMDGASEFQIFYKVVLPLVRPAMAAISVLVFTFVWNDYFWATVLVQGDHAMPITAGLKTLS
GIWVAQWHLVAAGSLVAALPPVLIFFLRQRYFIAGLTMGATKG

Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=261, Percent_Identity=27.5862068965517, Blast_Score=103, Evalue=9e-24,
Organism=Escherichia coli, GI1789860, Length=226, Percent_Identity=29.646017699115, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1790464, Length=217, Percent_Identity=27.1889400921659, Blast_Score=71, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31642; Mature: 31642

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFPTPIAQASRPAQWLYRLTVTVALVLWLLPLLGIALTSIRGPADIFAGNYWGWPTQWQI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHH
VENYRAIFSETPLAHYLVNTCLITIPSVIGAVALSCMAGFALGIYRFRLNLPVFFLFLAG
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NFVPFQILMIPVRLMSLRLGLYNSVPGLVLFHVAFNTGFCTFFMRNFIRELPRELIEAAR
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
MDGASEFQIFYKVVLPLVRPAMAAISVLVFTFVWNDYFWATVLVQGDHAMPITAGLKTLS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCHHHHHHHHH
GIWVAQWHLVAAGSLVAALPPVLIFFLRQRYFIAGLTMGATKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MFPTPIAQASRPAQWLYRLTVTVALVLWLLPLLGIALTSIRGPADIFAGNYWGWPTQWQI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHH
VENYRAIFSETPLAHYLVNTCLITIPSVIGAVALSCMAGFALGIYRFRLNLPVFFLFLAG
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NFVPFQILMIPVRLMSLRLGLYNSVPGLVLFHVAFNTGFCTFFMRNFIRELPRELIEAAR
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
MDGASEFQIFYKVVLPLVRPAMAAISVLVFTFVWNDYFWATVLVQGDHAMPITAGLKTLS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCHHHHHHHHH
GIWVAQWHLVAAGSLVAALPPVLIFFLRQRYFIAGLTMGATKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]