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The map label for this gene is yphF [C]

Identifier: 53723089

GI number: 53723089

Start: 2806228

End: 2807226

Strand: Reverse

Name: yphF [C]

Synonym: BPSS2071

Alternate gene names: 53723089

Gene position: 2807226-2806228 (Counterclockwise)

Preceding gene: 53723090

Following gene: 53723088

Centisome position: 88.47

GC content: 57.56

Gene sequence:

>999_bases
ATGCATCGTTTCACGACAAAGCCAGCGCTGACTCTTGCGACGGCTATCGGTCTGGCCGTCATGGCTTCCAGCGCTCTGGC
TCAGAACGAGCAGCCGTTAAAGTTCGATTACATCATTCACTCGAGCGCCAGCAATACGTTCTGGCAGGCCGTGAAAAAGG
GCATGGACGAAGCGTGCACTCAGGTCAAAGCGCAATGCCAGATGATCTTCACCCAGACGGAGGGCTCCGTATCCGAACAG
GCAAGCAACCTGCAAGCTGCATTGGCAGGCAAACCCGATGCAATAGCAACGACTATCGTCGACGACAAGGCGATCGAACC
CATCCTGAAGGAGGCACGCAACAAGGGTGTCACCGTCCTCGCGGCCAACGTTGATAGCAGCAAAGGCGCCAAGGGCAGTG
TGCGACAGGCCTTCATTGGCCAGGGCTTTGATGCGGCAGGGTATGCATTGGCGCAAAAACTCGCGGAGAAATTTCCTAAG
TCCGGGCCTGTCAATGTGCTCGTCGGCATCTCGGCTCCGGGCCAGAACTGGTCCGAGCAGCGCGGTGCCGGTGTCATGCG
GTTCATGGCCGATTACAAGGCCGCGAACCCTGGGCGCAAGATTACTTGGAAGCGAATCGATTCCGGCACTGACCTAGCTG
TGACCGCCGAACGCGTCGGGGCGTATCTCAACGCCAATCCGGACACCACGGCCTATTTCGACACGGGATTCTGGCATGCG
GGTGTCGCCAAAGCACTGAAGGACCGTGGCGTGCCGCCCGGCAAGATCCTCCTGGGTGGTTTCGACATCGTGCCCGATGT
GCTCAACAGCATGAAGGCTGGCTACATTCAGGTGGAAGTCGACCAGCAGCCATTTCTCCAGGGTTATCTACCAGTGATCC
AGGCCAATCTGATCAAAAAGTACAAGCTATCTGCATGGGACGTGGAAACTGGCAAAGGCCTGTTGCTGCCTGAACAGGTC
GACGGCGTGATCGAGTTGTCGAAGAAGGGCTATCGCTGA

Upstream 100 bases:

>100_bases
GAACTCATGCCCGACATCCGCGAGCGATTGACGATTGCCGTCAGAAATACATCGGACTGCTAATTGATATTTCAGATTAA
CACCCAAGGAAGGAGACAAC

Downstream 100 bases:

>100_bases
GTACTCACGGTGACACAAACATGGAACGCTTACTCAAAATCTATCTATCGAAGCCAGAGTTCGCAGGCGGGTTGATGTTG
ATTCTCCTGGCGATGCTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: ABC-Type Sugar Transport System; Sugar ABC Transporter Periplasmic Component-Like Protein; Ribose ABC Transporter; Monosaccharide-Transporting ATPase; ABC Transporter; Sugar ABC Transporter Periplasmic Protein; RbsB Protein

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MHRFTTKPALTLATAIGLAVMASSALAQNEQPLKFDYIIHSSASNTFWQAVKKGMDEACTQVKAQCQMIFTQTEGSVSEQ
ASNLQAALAGKPDAIATTIVDDKAIEPILKEARNKGVTVLAANVDSSKGAKGSVRQAFIGQGFDAAGYALAQKLAEKFPK
SGPVNVLVGISAPGQNWSEQRGAGVMRFMADYKAANPGRKITWKRIDSGTDLAVTAERVGAYLNANPDTTAYFDTGFWHA
GVAKALKDRGVPPGKILLGGFDIVPDVLNSMKAGYIQVEVDQQPFLQGYLPVIQANLIKKYKLSAWDVETGKGLLLPEQV
DGVIELSKKGYR

Sequences:

>Translated_332_residues
MHRFTTKPALTLATAIGLAVMASSALAQNEQPLKFDYIIHSSASNTFWQAVKKGMDEACTQVKAQCQMIFTQTEGSVSEQ
ASNLQAALAGKPDAIATTIVDDKAIEPILKEARNKGVTVLAANVDSSKGAKGSVRQAFIGQGFDAAGYALAQKLAEKFPK
SGPVNVLVGISAPGQNWSEQRGAGVMRFMADYKAANPGRKITWKRIDSGTDLAVTAERVGAYLNANPDTTAYFDTGFWHA
GVAKALKDRGVPPGKILLGGFDIVPDVLNSMKAGYIQVEVDQQPFLQGYLPVIQANLIKKYKLSAWDVETGKGLLLPEQV
DGVIELSKKGYR
>Mature_332_residues
MHRFTTKPALTLATAIGLAVMASSALAQNEQPLKFDYIIHSSASNTFWQAVKKGMDEACTQVKAQCQMIFTQTEGSVSEQ
ASNLQAALAGKPDAIATTIVDDKAIEPILKEARNKGVTVLAANVDSSKGAKGSVRQAFIGQGFDAAGYALAQKLAEKFPK
SGPVNVLVGISAPGQNWSEQRGAGVMRFMADYKAANPGRKITWKRIDSGTDLAVTAERVGAYLNANPDTTAYFDTGFWHA
GVAKALKDRGVPPGKILLGGFDIVPDVLNSMKAGYIQVEVDQQPFLQGYLPVIQANLIKKYKLSAWDVETGKGLLLPEQV
DGVIELSKKGYR

Specific function: Probably Part Of The Binding-Protein-Dependent Transport System Yphdef. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35565; Mature: 35565

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRFTTKPALTLATAIGLAVMASSALAQNEQPLKFDYIIHSSASNTFWQAVKKGMDEACT
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHH
QVKAQCQMIFTQTEGSVSEQASNLQAALAGKPDAIATTIVDDKAIEPILKEARNKGVTVL
HHHHHHHEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEE
AANVDSSKGAKGSVRQAFIGQGFDAAGYALAQKLAEKFPKSGPVNVLVGISAPGQNWSEQ
EECCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHH
RGAGVMRFMADYKAANPGRKITWKRIDSGTDLAVTAERVGAYLNANPDTTAYFDTGFWHA
HCCHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEHHHHCEEECCCCCCCEEEECCCHHH
GVAKALKDRGVPPGKILLGGFDIVPDVLNSMKAGYIQVEVDQQPFLQGYLPVIQANLIKK
HHHHHHHHCCCCCCEEEECCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHH
YKLSAWDVETGKGLLLPEQVDGVIELSKKGYR
HCCCEEECCCCCCEECHHHHCHHHHHHCCCCC
>Mature Secondary Structure
MHRFTTKPALTLATAIGLAVMASSALAQNEQPLKFDYIIHSSASNTFWQAVKKGMDEACT
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHH
QVKAQCQMIFTQTEGSVSEQASNLQAALAGKPDAIATTIVDDKAIEPILKEARNKGVTVL
HHHHHHHEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEE
AANVDSSKGAKGSVRQAFIGQGFDAAGYALAQKLAEKFPKSGPVNVLVGISAPGQNWSEQ
EECCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHH
RGAGVMRFMADYKAANPGRKITWKRIDSGTDLAVTAERVGAYLNANPDTTAYFDTGFWHA
HCCHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEHHHHCEEECCCCCCCEEEECCCHHH
GVAKALKDRGVPPGKILLGGFDIVPDVLNSMKAGYIQVEVDQQPFLQGYLPVIQANLIKK
HHHHHHHHCCCCCCEEEECCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHH
YKLSAWDVETGKGLLLPEQVDGVIELSKKGYR
HCCCEEECCCCCCEECHHHHCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA