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The map label for this gene is xylB [H]

Identifier: 53723044

GI number: 53723044

Start: 2737851

End: 2739464

Strand: Reverse

Name: xylB [H]

Synonym: BPSS2026

Alternate gene names: 53723044

Gene position: 2739464-2737851 (Counterclockwise)

Preceding gene: 53723045

Following gene: 53723043

Centisome position: 86.34

GC content: 69.76

Gene sequence:

>1614_bases
ATGACGGAACCCTGCGTGCTGGCGATCGATCTCGGCACGAGCGGCCCGAAGGCCGCCGTCGTTTCGCTCGACGGGCGCGT
CGTCGCGGCGGCGCGCGACGCGGTGGCGACGCTGCGCATGCCGGACGGCGGCGTCGAGCAGGACCCGCTCGCCGTCTGGC
GCGCGGTCAAGCGCGCGTGCGGCGGCGCGCTGCGCGCAGCGGGCATCGCGTCGCGCGACGTGCTCGCCGTCGCGTGCGCG
AGCCAGTATTCGTCGATCGTACCCGTCGGCGCCGACGGCGCGCCTGTCGCGAACATGATGCTCTGGCTCGACCGGCGCGG
CGCGCCGCGCGCGAGGCGCGGCGCCGCCGACGGTCCGCTGCGCGCCGATTCGCCGCTGCGGCAGTGGCGCTGGCTGCGCG
TGCATGGTCTGCCGCCCGTCGAAGGCGGCATTTCGCTCACGCACATGCGCTATCTGAAGCACGCGAAGCCCGATGTGTAC
GCACGCACCGCGACGTTCCTCGAGCCGATGGATTATCTGAACCTGTGCTTCACCGGGCGCGCGTGCGCGAATCAATGCAC
GGCGTTCATGTCGCTCGTGGTCGACAATCGCCGCCTGAATGTGGCGTGCTACGATCCGCGGCTCGTGCGCTATTCGCGCA
TCGACGCGAGCAAGCTGCCCGAGCTGCTGCCCGTCGACGCGATCGTCGGCCGCGTGCTGCCGGACGTCGCCGACGAACTC
GGCCTGCCGCGCGGCACGCCGGTGGTGGCCGGGCTGAACGACACGCAGGCGGGCGGCATCGGCGCGCATGCGTTCGCGGG
CGAGCATGCGGCGCTGTCGATCGGCAGTTCGAGCGTGATGATCGCGCACGTGCGTTTCAAGCGCACCGATATCCGCCATG
CGATCCTCAGCATGCCGAGCCCGATTCCCGATACGTACTTCGTGATGGCCGAGAACGGCATCGGCGGCGCGGCATTGAAG
CATTTTATCGAGCAGCAGGTCTATGCGGACGATCCGTTCGGCGCACTGCCGCGCGACGATTGTTTCGCACGCCTGCAAAA
GGCGATCGACGCGACGCCGCCCGGCAGCGGCGGCGTGATGTTCATGCCGTGGCTGGCCGGATCGCTCGCGCCGCATGCGG
ATGCCTCGATGCGCGGCGGCTTCGTCAATCTCGGGCTTGACGCGACGCGCAGCCATCTCGCGCGCGCGGTGCTCGAAGGC
GTCGCGATGAACCTGCGCTGGCTGCGCGGCCCCGTCGAGGCGTTCGCGAAGCGGCGCTTCTCGCACTTCGTGTTCTACGG
CGGCGGCGCGGAATCGGATGCGTGGTCGCAGATCGTCGCGGACGTGCTGGACGCGCCTGTGCATCGCATCGAGCAGCCGC
AATACACGACATGCGTCGGCGTCGCGTTGCTCGCGTTCCAGCGGCTCGGCCTACTCGGTTTCGACGATTTCGCGTCGCGC
GTGCGGATTCGCGGCGTCTGCGAGCCGAATTGCGCGAACGCGCGCGTCTATGCGGAGATGTCGGCGCAATTCGTCGAGGC
GTTCAGGCGCAATCGGCCGATTTTCAGGGCGTTGCAGCGCAATCTGCGTCGCCCGGCGTCGGCGGCCGCGAATGGACTCC
GCCCGAGCGGCTGA

Upstream 100 bases:

>100_bases
GCGCATTGCCCGCCGCGCCCTCCACGTCGCTCGCGCTCGTCTATGCTTCAGACGTGTATCTCCAGACGTGTCCCGCAACG
ATCCGACCCGAGGAGGCGCG

Downstream 100 bases:

>100_bases
TGCATGCGGCTCGCGCATATCGAATGAACGGTGCGCGCGCGCTTGATCGAATGCCGCCTGGCCGTCGCCTTCACTTCCCC
TGCCATCTCCACCTCCGCCG

Product: carbohydrate kinase

Products: ADP; L-Xylulose 5-Phosphate. [C]

Alternate protein names: NA

Number of amino acids: Translated: 537; Mature: 536

Protein sequence:

>537_residues
MTEPCVLAIDLGTSGPKAAVVSLDGRVVAAARDAVATLRMPDGGVEQDPLAVWRAVKRACGGALRAAGIASRDVLAVACA
SQYSSIVPVGADGAPVANMMLWLDRRGAPRARRGAADGPLRADSPLRQWRWLRVHGLPPVEGGISLTHMRYLKHAKPDVY
ARTATFLEPMDYLNLCFTGRACANQCTAFMSLVVDNRRLNVACYDPRLVRYSRIDASKLPELLPVDAIVGRVLPDVADEL
GLPRGTPVVAGLNDTQAGGIGAHAFAGEHAALSIGSSSVMIAHVRFKRTDIRHAILSMPSPIPDTYFVMAENGIGGAALK
HFIEQQVYADDPFGALPRDDCFARLQKAIDATPPGSGGVMFMPWLAGSLAPHADASMRGGFVNLGLDATRSHLARAVLEG
VAMNLRWLRGPVEAFAKRRFSHFVFYGGGAESDAWSQIVADVLDAPVHRIEQPQYTTCVGVALLAFQRLGLLGFDDFASR
VRIRGVCEPNCANARVYAEMSAQFVEAFRRNRPIFRALQRNLRRPASAAANGLRPSG

Sequences:

>Translated_537_residues
MTEPCVLAIDLGTSGPKAAVVSLDGRVVAAARDAVATLRMPDGGVEQDPLAVWRAVKRACGGALRAAGIASRDVLAVACA
SQYSSIVPVGADGAPVANMMLWLDRRGAPRARRGAADGPLRADSPLRQWRWLRVHGLPPVEGGISLTHMRYLKHAKPDVY
ARTATFLEPMDYLNLCFTGRACANQCTAFMSLVVDNRRLNVACYDPRLVRYSRIDASKLPELLPVDAIVGRVLPDVADEL
GLPRGTPVVAGLNDTQAGGIGAHAFAGEHAALSIGSSSVMIAHVRFKRTDIRHAILSMPSPIPDTYFVMAENGIGGAALK
HFIEQQVYADDPFGALPRDDCFARLQKAIDATPPGSGGVMFMPWLAGSLAPHADASMRGGFVNLGLDATRSHLARAVLEG
VAMNLRWLRGPVEAFAKRRFSHFVFYGGGAESDAWSQIVADVLDAPVHRIEQPQYTTCVGVALLAFQRLGLLGFDDFASR
VRIRGVCEPNCANARVYAEMSAQFVEAFRRNRPIFRALQRNLRRPASAAANGLRPSG
>Mature_536_residues
TEPCVLAIDLGTSGPKAAVVSLDGRVVAAARDAVATLRMPDGGVEQDPLAVWRAVKRACGGALRAAGIASRDVLAVACAS
QYSSIVPVGADGAPVANMMLWLDRRGAPRARRGAADGPLRADSPLRQWRWLRVHGLPPVEGGISLTHMRYLKHAKPDVYA
RTATFLEPMDYLNLCFTGRACANQCTAFMSLVVDNRRLNVACYDPRLVRYSRIDASKLPELLPVDAIVGRVLPDVADELG
LPRGTPVVAGLNDTQAGGIGAHAFAGEHAALSIGSSSVMIAHVRFKRTDIRHAILSMPSPIPDTYFVMAENGIGGAALKH
FIEQQVYADDPFGALPRDDCFARLQKAIDATPPGSGGVMFMPWLAGSLAPHADASMRGGFVNLGLDATRSHLARAVLEGV
AMNLRWLRGPVEAFAKRRFSHFVFYGGGAESDAWSQIVADVLDAPVHRIEQPQYTTCVGVALLAFQRLGLLGFDDFASRV
RIRGVCEPNCANARVYAEMSAQFVEAFRRNRPIFRALQRNLRRPASAAANGLRPSG

Specific function: L-lyxose utilization. [C]

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FGGY kinase family [H]

Homologues:

Organism=Escherichia coli, GI1790005, Length=484, Percent_Identity=26.6528925619835, Blast_Score=122, Evalue=7e-29,
Organism=Escherichia coli, GI1787789, Length=473, Percent_Identity=25.1585623678647, Blast_Score=103, Evalue=3e-23,
Organism=Escherichia coli, GI1789987, Length=440, Percent_Identity=28.8636363636364, Blast_Score=101, Evalue=1e-22,
Organism=Escherichia coli, GI1789138, Length=537, Percent_Identity=22.3463687150838, Blast_Score=86, Evalue=6e-18,
Organism=Escherichia coli, GI1790361, Length=488, Percent_Identity=21.9262295081967, Blast_Score=79, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018483
- InterPro:   IPR018484
- InterPro:   IPR006000 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: 2.7.1.53 [C]

Molecular weight: Translated: 57734; Mature: 57603

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEPCVLAIDLGTSGPKAAVVSLDGRVVAAARDAVATLRMPDGGVEQDPLAVWRAVKRAC
CCCCEEEEEECCCCCCCEEEEEECCEEEEEEHHCEEEEECCCCCCCCCHHHHHHHHHHHH
GGALRAAGIASRDVLAVACASQYSSIVPVGADGAPVANMMLWLDRRGAPRARRGAADGPL
CCHHHHCCCCCCHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHCCCCCHHHCCCCCCCC
RADSPLRQWRWLRVHGLPPVEGGISLTHMRYLKHAKPDVYARTATFLEPMDYLNLCFTGR
CCCCHHHHCEEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCH
ACANQCTAFMSLVVDNRRLNVACYDPRLVRYSRIDASKLPELLPVDAIVGRVLPDVADEL
HHHHHHHHHHHHHHCCCEEEEEEECCCEEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHH
GLPRGTPVVAGLNDTQAGGIGAHAFAGEHAALSIGSSSVMIAHVRFKRTDIRHAILSMPS
CCCCCCEEEECCCCCCCCCCCCHHHCCCCEEEEECCCCEEEEEEEHHHHHHHHHHHHCCC
PIPDTYFVMAENGIGGAALKHFIEQQVYADDPFGALPRDDCFARLQKAIDATPPGSGGVM
CCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEE
FMPWLAGSLAPHADASMRGGFVNLGLDATRSHLARAVLEGVAMNLRWLRGPVEAFAKRRF
EHHHHCCCCCCCCCCHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SHFVFYGGGAESDAWSQIVADVLDAPVHRIEQPQYTTCVGVALLAFQRLGLLGFDDFASR
CEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHC
VRIRGVCEPNCANARVYAEMSAQFVEAFRRNRPIFRALQRNLRRPASAAANGLRPSG
EEEEECCCCCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHCCCCCCC
>Mature Secondary Structure 
TEPCVLAIDLGTSGPKAAVVSLDGRVVAAARDAVATLRMPDGGVEQDPLAVWRAVKRAC
CCCEEEEEECCCCCCCEEEEEECCEEEEEEHHCEEEEECCCCCCCCCHHHHHHHHHHHH
GGALRAAGIASRDVLAVACASQYSSIVPVGADGAPVANMMLWLDRRGAPRARRGAADGPL
CCHHHHCCCCCCHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHCCCCCHHHCCCCCCCC
RADSPLRQWRWLRVHGLPPVEGGISLTHMRYLKHAKPDVYARTATFLEPMDYLNLCFTGR
CCCCHHHHCEEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCH
ACANQCTAFMSLVVDNRRLNVACYDPRLVRYSRIDASKLPELLPVDAIVGRVLPDVADEL
HHHHHHHHHHHHHHCCCEEEEEEECCCEEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHH
GLPRGTPVVAGLNDTQAGGIGAHAFAGEHAALSIGSSSVMIAHVRFKRTDIRHAILSMPS
CCCCCCEEEECCCCCCCCCCCCHHHCCCCEEEEECCCCEEEEEEEHHHHHHHHHHHHCCC
PIPDTYFVMAENGIGGAALKHFIEQQVYADDPFGALPRDDCFARLQKAIDATPPGSGGVM
CCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEE
FMPWLAGSLAPHADASMRGGFVNLGLDATRSHLARAVLEGVAMNLRWLRGPVEAFAKRRF
EHHHHCCCCCCCCCCHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SHFVFYGGGAESDAWSQIVADVLDAPVHRIEQPQYTTCVGVALLAFQRLGLLGFDDFASR
CEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHC
VRIRGVCEPNCANARVYAEMSAQFVEAFRRNRPIFRALQRNLRRPASAAANGLRPSG
EEEEECCCCCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-Xylulose [C]

Specific reaction: ATP + L-Xylulose = ADP + L-Xylulose 5-Phosphate. [C]

General reaction: Phospho group transfer [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA