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The map label for this gene is psuT [H]

Identifier: 53722984

GI number: 53722984

Start: 2651869

End: 2653143

Strand: Reverse

Name: psuT [H]

Synonym: BPSS1963

Alternate gene names: 53722984

Gene position: 2653143-2651869 (Counterclockwise)

Preceding gene: 53722985

Following gene: 53722983

Centisome position: 83.62

GC content: 69.1

Gene sequence:

>1275_bases
GTGGACATCTTGCGCAGCTTGTGTGGCATCGTGGTATTGCTCGGCGTCGGTTATGCGCTGTCGGTCAACCGGCGGGCGAT
CAGCGCCCGCACCGTCGTCGCTGCGCTCGCGACGCAGCTCGCGATCGGCGCGCTCGTGCTGTTCGTGCCCGTCGGCCGCG
ACGCGCTCGCCGGCACCGCGCATGCGGTCAACAGCGTGCTCGAGATGGGGCAGCACGGCGTCGCGTTCCTGTTCGGCGGC
CTCGTCGGCGACAAGATGTTCGCGCTCTTCGGCGACGGCGGCTTCGCGTTCGCGCTGCGCGTGCTGCCGATGATCGTGTT
CGTCACGTCGCTGATCGCGGTGCTCTATTACATCGGCGTGATGAAGTGGCTGATCCGCATCGTCGGCACCGCGATGGCGA
AGCTGCTCGGCGTGAGCCGCATCGAGGCGTGCTCGGCCGTGGCGACGATCTTCCTCGGCCAGAGCGAGATGCCCGCGTTC
GTGAAGCCGTTCGTGCGGCGGATGAGCGGCACCGAAGTGTTCGCGGTGATGTCGAGCGGCATGGCGTCGGTCGCGGGTTC
GGTGCTCGCCGGCTACGCGGGGCTCGGCGTGAAGATGGAGTATCTGCTCGCCGCGTCGTTCATGGCGATCCCGGGCGGCC
TGCTGTTCGGCAAGATGCTGTGCCCGACGACGGAGCCCTCGCGCGTCGCCGTCGACTCGCTCGAGTTCGACGAGAAGCGC
GCGGCGAACGTGATCGAGGCGGCCGCCTCCGGCGCGGGCGTCGGGATGCGCATCGCGGTGAACGTCGGTACCATGCTGAT
CGCGTTCATCGGCCTCATCGCGCTGCTCAACGCGATGGTCGGGCTCGCCGCCGGCTGGCTCGGCTTCGCCGGCGTCACGC
TGCAATCGCTGCTCGGCGCGCTGTTCTCGCCGCTCGCGTGGCTGATCGGCGTGCCGTGGCGGGATGCGCCGGTGGCCGGC
AGCTTCATCGGCCAGAAGCTGATCCTGAACGAGTTCGTCGCGTACGGCGCGCTGTCGCCCTATCTGAAGGATGCCGCGCA
GGTCGTCGCGGCCGGCTTGCCGGTGCTCGCGCCGAAGACGATCGCGATCGTGTCGTTCGCGCTGTGCGGCTTCGCGAATT
TCTCGTCGATCGCGATCCTGACGGGCGGCTTCACCGCGGTCGAGCCCGGCATGCGCTCCGAAGTCGCGCGCTACGGCCTG
CGCGCGCTCGCGGCCGCGACGCTGTCGAACCTGATGAGCGCGACGATCGCCGGGCTGTTCCTGTCCCTTTCCTGA

Upstream 100 bases:

>100_bases
GATGAATAAACGGCGCGCGCGCGCCCGACCGGAGACAGCCGGCGGCCGGCCCGGTTGCGCCGGCGGCGGCGCTTTCCATC
CCATCCTCCGAGGTACGTTC

Downstream 100 bases:

>100_bases
ACGAGGTGCTCGCATGGAGCTTTCGTTGAATCGCAACCAGTTGACCGAAGCGGCGCTCAAGGCGCTGCATCTGATCGATC
TCACGTCGCTGAACGACGAC

Product: nucleoside transport related membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MDILRSLCGIVVLLGVGYALSVNRRAISARTVVAALATQLAIGALVLFVPVGRDALAGTAHAVNSVLEMGQHGVAFLFGG
LVGDKMFALFGDGGFAFALRVLPMIVFVTSLIAVLYYIGVMKWLIRIVGTAMAKLLGVSRIEACSAVATIFLGQSEMPAF
VKPFVRRMSGTEVFAVMSSGMASVAGSVLAGYAGLGVKMEYLLAASFMAIPGGLLFGKMLCPTTEPSRVAVDSLEFDEKR
AANVIEAAASGAGVGMRIAVNVGTMLIAFIGLIALLNAMVGLAAGWLGFAGVTLQSLLGALFSPLAWLIGVPWRDAPVAG
SFIGQKLILNEFVAYGALSPYLKDAAQVVAAGLPVLAPKTIAIVSFALCGFANFSSIAILTGGFTAVEPGMRSEVARYGL
RALAAATLSNLMSATIAGLFLSLS

Sequences:

>Translated_424_residues
MDILRSLCGIVVLLGVGYALSVNRRAISARTVVAALATQLAIGALVLFVPVGRDALAGTAHAVNSVLEMGQHGVAFLFGG
LVGDKMFALFGDGGFAFALRVLPMIVFVTSLIAVLYYIGVMKWLIRIVGTAMAKLLGVSRIEACSAVATIFLGQSEMPAF
VKPFVRRMSGTEVFAVMSSGMASVAGSVLAGYAGLGVKMEYLLAASFMAIPGGLLFGKMLCPTTEPSRVAVDSLEFDEKR
AANVIEAAASGAGVGMRIAVNVGTMLIAFIGLIALLNAMVGLAAGWLGFAGVTLQSLLGALFSPLAWLIGVPWRDAPVAG
SFIGQKLILNEFVAYGALSPYLKDAAQVVAAGLPVLAPKTIAIVSFALCGFANFSSIAILTGGFTAVEPGMRSEVARYGL
RALAAATLSNLMSATIAGLFLSLS
>Mature_424_residues
MDILRSLCGIVVLLGVGYALSVNRRAISARTVVAALATQLAIGALVLFVPVGRDALAGTAHAVNSVLEMGQHGVAFLFGG
LVGDKMFALFGDGGFAFALRVLPMIVFVTSLIAVLYYIGVMKWLIRIVGTAMAKLLGVSRIEACSAVATIFLGQSEMPAF
VKPFVRRMSGTEVFAVMSSGMASVAGSVLAGYAGLGVKMEYLLAASFMAIPGGLLFGKMLCPTTEPSRVAVDSLEFDEKR
AANVIEAAASGAGVGMRIAVNVGTMLIAFIGLIALLNAMVGLAAGWLGFAGVTLQSLLGALFSPLAWLIGVPWRDAPVAG
SFIGQKLILNEFVAYGALSPYLKDAAQVVAAGLPVLAPKTIAIVSFALCGFANFSSIAILTGGFTAVEPGMRSEVARYGL
RALAAATLSNLMSATIAGLFLSLS

Specific function: Could be involved in pseudouridine transport [H]

COG id: COG1972

COG function: function code F; Nucleoside permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family [H]

Homologues:

Organism=Homo sapiens, GI42542381, Length=428, Percent_Identity=34.8130841121495, Blast_Score=237, Evalue=2e-62,
Organism=Homo sapiens, GI11545853, Length=365, Percent_Identity=32.8767123287671, Blast_Score=222, Evalue=5e-58,
Organism=Homo sapiens, GI227116277, Length=421, Percent_Identity=32.0665083135392, Blast_Score=220, Evalue=2e-57,
Organism=Escherichia coli, GI1788488, Length=424, Percent_Identity=55.188679245283, Blast_Score=429, Evalue=1e-121,
Organism=Escherichia coli, GI1788485, Length=424, Percent_Identity=54.2452830188679, Blast_Score=424, Evalue=1e-120,
Organism=Escherichia coli, GI1788737, Length=404, Percent_Identity=29.7029702970297, Blast_Score=169, Evalue=4e-43,
Organism=Caenorhabditis elegans, GI17560276, Length=404, Percent_Identity=29.2079207920792, Blast_Score=184, Evalue=7e-47,
Organism=Caenorhabditis elegans, GI71991794, Length=408, Percent_Identity=30.1470588235294, Blast_Score=174, Evalue=5e-44,
Organism=Caenorhabditis elegans, GI25146537, Length=202, Percent_Identity=29.2079207920792, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI45552519, Length=406, Percent_Identity=32.7586206896552, Blast_Score=239, Evalue=2e-63,
Organism=Drosophila melanogaster, GI45552517, Length=406, Percent_Identity=32.7586206896552, Blast_Score=239, Evalue=3e-63,
Organism=Drosophila melanogaster, GI19921868, Length=406, Percent_Identity=32.7586206896552, Blast_Score=239, Evalue=3e-63,
Organism=Drosophila melanogaster, GI281360430, Length=416, Percent_Identity=30.7692307692308, Blast_Score=209, Evalue=2e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008276
- InterPro:   IPR018270
- InterPro:   IPR011642
- InterPro:   IPR011657
- InterPro:   IPR002668 [H]

Pfam domain/function: PF07670 Gate; PF07662 Nucleos_tra2_C; PF01773 Nucleos_tra2_N [H]

EC number: NA

Molecular weight: Translated: 43700; Mature: 43700

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDILRSLCGIVVLLGVGYALSVNRRAISARTVVAALATQLAIGALVLFVPVGRDALAGTA
CHHHHHHHHHHHHHHCCHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
HAVNSVLEMGQHGVAFLFGGLVGDKMFALFGDGGFAFALRVLPMIVFVTSLIAVLYYIGV
HHHHHHHHHCCCCHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MKWLIRIVGTAMAKLLGVSRIEACSAVATIFLGQSEMPAFVKPFVRRMSGTEVFAVMSSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHCC
MASVAGSVLAGYAGLGVKMEYLLAASFMAIPGGLLFGKMLCPTTEPSRVAVDSLEFDEKR
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEHHCCCCCHHH
AANVIEAAASGAGVGMRIAVNVGTMLIAFIGLIALLNAMVGLAAGWLGFAGVTLQSLLGA
HHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFSPLAWLIGVPWRDAPVAGSFIGQKLILNEFVAYGALSPYLKDAAQVVAAGLPVLAPKT
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHH
IAIVSFALCGFANFSSIAILTGGFTAVEPGMRSEVARYGLRALAAATLSNLMSATIAGLF
HHHHHHHHHCCCCCCCEEEEECCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSLS
HCCC
>Mature Secondary Structure
MDILRSLCGIVVLLGVGYALSVNRRAISARTVVAALATQLAIGALVLFVPVGRDALAGTA
CHHHHHHHHHHHHHHCCHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
HAVNSVLEMGQHGVAFLFGGLVGDKMFALFGDGGFAFALRVLPMIVFVTSLIAVLYYIGV
HHHHHHHHHCCCCHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MKWLIRIVGTAMAKLLGVSRIEACSAVATIFLGQSEMPAFVKPFVRRMSGTEVFAVMSSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHCC
MASVAGSVLAGYAGLGVKMEYLLAASFMAIPGGLLFGKMLCPTTEPSRVAVDSLEFDEKR
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEHHCCCCCHHH
AANVIEAAASGAGVGMRIAVNVGTMLIAFIGLIALLNAMVGLAAGWLGFAGVTLQSLLGA
HHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFSPLAWLIGVPWRDAPVAGSFIGQKLILNEFVAYGALSPYLKDAAQVVAAGLPVLAPKT
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHH
IAIVSFALCGFANFSSIAILTGGFTAVEPGMRSEVARYGLRALAAATLSNLMSATIAGLF
HHHHHHHHHCCCCCCCEEEEECCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSLS
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]