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The map label for this gene is atpA

Identifier: 53722967

GI number: 53722967

Start: 2633163

End: 2635163

Strand: Reverse

Name: atpA

Synonym: BPSS1946

Alternate gene names: 53722967

Gene position: 2635163-2633163 (Counterclockwise)

Preceding gene: 53722968

Following gene: 53722966

Centisome position: 83.05

GC content: 73.91

Gene sequence:

>2001_bases
ATGACGCCGACGCCTGACGCACCTGCCGCCGCCGCCGCTGATGCCGCAACCGGCGCCGGCTGGCTCGCGCGCCGCCGGGG
CGCACTCGCGCGCGTCGCGCTCGCGCCCGTCGCGCAGGCGATCGGGCGGGTCGAGCGCGTCGCGGACGGGATCGCGTTCG
TGTCCGGTCTCGAAGACACGATGCTCAACGAAGTGCTGCGTTTCGAAGGCGGCGTGACCGGCTTCGCGCATACGCTCGAT
GAGGATCTGATCAGCGTCGTGCTGCTCGATCCGGACGCGGGCGTTCGCGCGCAGACGGCGGTCGCGCGCACGGGCGCGGT
GCTCGAAGTGCCGGCCGGGCCGCAACTGCTCGGGCGCGTGGTCGATCCGCTCGGCCGCCCGCTCGACGGCGGCGCACCGC
TCGATGCGGCGCACACGCTGCCGATCGAGCGCGCCGCGCCGGCGATCATCGAGCGCGATCTCGTCAGCGAGCCGCTCGAC
ACCGGCGTGCTGATCGTCGACGCGCTCTTCACGATCGGGCGCGGCCAGCGCGAGCTGATCATCGGCGATCGCGCGACCGG
CAAGACCTCGCTCGCGATCGACGCGATCGTCAACCAGCGGCATTCGGACGTGATCTGCGTGTACGTCGCGATCGGCCAGC
GCGCGAGCGCGGTGCGCCGCGTGATCGACGCGGTGCGCCGCTACGGCGCGCCCGAGCGCTGCGTCTTCGTCGTCGCGCCG
GCCGCGTGCGCGCCGGGGCTGCAGTGGATCGCGCCGTTCGCGGGCTTCTCGATCGCCGAATATTTCCGCGACCGCGGCCA
ACACGCGCTCGTCGTCGTCGATGACCTGACAAAGCATGCGGCGACGCACCGCGAGCTCGCGCTGCTCACGCGCGAGCCGC
CCGGCCGCGAGGCGTATCCGGGCGACATCTTCTACGTGCACGCGCGCCTGCTCGAACGCGCGGCGAAGCTGTCGGCGGCG
CTCGGCGGCGGATCGCTGTCCGCGCTGCCGATCGCGGAGACCGATGCGGGCAACCTCGCCGCCTACATTCCGACGAACCT
GATTTCGATCACCGACGGGCAGATCGTGCTCGATTCGGCGCTGTTCGCCGCGAACCAGCGGCCGGCCGTCGACGTCGGGC
TGAGCGTGAGCCGCGTCGGCGGCAAGGCGCAGCATCCGGCGCTGCGCGCCGCGTCGGGCCGCCTGCGGCTCGACTATGCG
CAGTTCCTCGAGCTGGAGGCGTTCACGCGCTTCGGCGGGCTCACGGACGCGCGGCTGCGCGCGCAGATCACGCGCGGCGA
GCGCATTCGCGCGTTGATCACGCAGCCGCGCTTTCGCGCGCTGCGCACGCTCGACGAAGTGGTGCTGCTCAAGGCGCTCG
CGGCGGGCGCGCTCGATGCGATGTCGCCGGATCTCGTCGCGCCGCTGCGCGAGCGCTTGCCTGCGTGGCTCGATGCGCGG
ATCGCGGCGCTCACGCCGGCGCTTGCGCCGCCGCGCGACTGGCTTGCGGACGATGCGGCGCTCGACGCGCTCGCGGAATC
GGTCGGCGAGCTGATCGAGCGGATCGCCGCGGACGCCGCGCGTCGCGCGACGGCGGGCATGCCGGCGGAGGACGCGGCGG
GCGACATCGGCGGCGCGTTCGGCGGCGAGCAGGCGCGCGGCGATGCGGATCGTGATGCGGATCATGGCGCGAATCGCGAG
GTCAGTCGCGAGGTCAGTCCCGAGGCGAGTCGCGAAGTGAGCCGTGAAGTGAGCTGTGAAGTGAGCCACGAGGCCGATCG
AGACGCGGCCGCCGATGCGGCGCGCGTCGCCGGTCGGGCGCCCGGGCGCGCCGAGCCGGATCGCGCGGCCCCACGCGCGA
TGCCCGACGGGCCGCCGCGCGCGCAGGCCGACGGCGATCGCGCATCGGCGTCTCGGCCGCGGCCCGATGCGCGCGGCGAC
GCGGCGCGCACCGCACCGTCTCCGCAAGGCGGTGCCGACGCCAACGTCGATGCCGAAGCCGAAGCGAGGCACAAGCGATG
A

Upstream 100 bases:

>100_bases
GCGCTGATCGCCGGGCTCGAGCTCGAATCGAAATACGCGAACGTGCGCAACAGCCTGCGCCAGGATCTCGCGACCATCGA
GGCAGCGTTGCTGAACGAAG

Downstream 100 bases:

>100_bases
GCGACAAGCTCGCCGCGATCGAGGCGCGCACCGATACCGCTCGTCAACTGCAGACCGTGATCGGTGCGATGCAGGGCGTG
GCCGCCGCGCGCGCGCACGA

Product: F0F1 ATP synthase subunit alpha

Products: NA

Alternate protein names: ATP synthase F1 sector subunit alpha 2; F-ATPase subunit alpha 2 [H]

Number of amino acids: Translated: 666; Mature: 665

Protein sequence:

>666_residues
MTPTPDAPAAAAADAATGAGWLARRRGALARVALAPVAQAIGRVERVADGIAFVSGLEDTMLNEVLRFEGGVTGFAHTLD
EDLISVVLLDPDAGVRAQTAVARTGAVLEVPAGPQLLGRVVDPLGRPLDGGAPLDAAHTLPIERAAPAIIERDLVSEPLD
TGVLIVDALFTIGRGQRELIIGDRATGKTSLAIDAIVNQRHSDVICVYVAIGQRASAVRRVIDAVRRYGAPERCVFVVAP
AACAPGLQWIAPFAGFSIAEYFRDRGQHALVVVDDLTKHAATHRELALLTREPPGREAYPGDIFYVHARLLERAAKLSAA
LGGGSLSALPIAETDAGNLAAYIPTNLISITDGQIVLDSALFAANQRPAVDVGLSVSRVGGKAQHPALRAASGRLRLDYA
QFLELEAFTRFGGLTDARLRAQITRGERIRALITQPRFRALRTLDEVVLLKALAAGALDAMSPDLVAPLRERLPAWLDAR
IAALTPALAPPRDWLADDAALDALAESVGELIERIAADAARRATAGMPAEDAAGDIGGAFGGEQARGDADRDADHGANRE
VSREVSPEASREVSREVSCEVSHEADRDAAADAARVAGRAPGRAEPDRAAPRAMPDGPPRAQADGDRASASRPRPDARGD
AARTAPSPQGGADANVDAEAEARHKR

Sequences:

>Translated_666_residues
MTPTPDAPAAAAADAATGAGWLARRRGALARVALAPVAQAIGRVERVADGIAFVSGLEDTMLNEVLRFEGGVTGFAHTLD
EDLISVVLLDPDAGVRAQTAVARTGAVLEVPAGPQLLGRVVDPLGRPLDGGAPLDAAHTLPIERAAPAIIERDLVSEPLD
TGVLIVDALFTIGRGQRELIIGDRATGKTSLAIDAIVNQRHSDVICVYVAIGQRASAVRRVIDAVRRYGAPERCVFVVAP
AACAPGLQWIAPFAGFSIAEYFRDRGQHALVVVDDLTKHAATHRELALLTREPPGREAYPGDIFYVHARLLERAAKLSAA
LGGGSLSALPIAETDAGNLAAYIPTNLISITDGQIVLDSALFAANQRPAVDVGLSVSRVGGKAQHPALRAASGRLRLDYA
QFLELEAFTRFGGLTDARLRAQITRGERIRALITQPRFRALRTLDEVVLLKALAAGALDAMSPDLVAPLRERLPAWLDAR
IAALTPALAPPRDWLADDAALDALAESVGELIERIAADAARRATAGMPAEDAAGDIGGAFGGEQARGDADRDADHGANRE
VSREVSPEASREVSREVSCEVSHEADRDAAADAARVAGRAPGRAEPDRAAPRAMPDGPPRAQADGDRASASRPRPDARGD
AARTAPSPQGGADANVDAEAEARHKR
>Mature_665_residues
TPTPDAPAAAAADAATGAGWLARRRGALARVALAPVAQAIGRVERVADGIAFVSGLEDTMLNEVLRFEGGVTGFAHTLDE
DLISVVLLDPDAGVRAQTAVARTGAVLEVPAGPQLLGRVVDPLGRPLDGGAPLDAAHTLPIERAAPAIIERDLVSEPLDT
GVLIVDALFTIGRGQRELIIGDRATGKTSLAIDAIVNQRHSDVICVYVAIGQRASAVRRVIDAVRRYGAPERCVFVVAPA
ACAPGLQWIAPFAGFSIAEYFRDRGQHALVVVDDLTKHAATHRELALLTREPPGREAYPGDIFYVHARLLERAAKLSAAL
GGGSLSALPIAETDAGNLAAYIPTNLISITDGQIVLDSALFAANQRPAVDVGLSVSRVGGKAQHPALRAASGRLRLDYAQ
FLELEAFTRFGGLTDARLRAQITRGERIRALITQPRFRALRTLDEVVLLKALAAGALDAMSPDLVAPLRERLPAWLDARI
AALTPALAPPRDWLADDAALDALAESVGELIERIAADAARRATAGMPAEDAAGDIGGAFGGEQARGDADRDADHGANREV
SREVSPEASREVSREVSCEVSHEADRDAAADAARVAGRAPGRAEPDRAAPRAMPDGPPRAQADGDRASASRPRPDARGDA
ARTAPSPQGGADANVDAEAEARHKR

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit [H]

COG id: COG0056

COG function: function code C; F0F1-type ATP synthase, alpha subunit

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase alpha/beta chains family [H]

Homologues:

Organism=Homo sapiens, GI50345984, Length=451, Percent_Identity=45.2328159645233, Blast_Score=402, Evalue=1e-112,
Organism=Homo sapiens, GI4757810, Length=451, Percent_Identity=45.2328159645233, Blast_Score=402, Evalue=1e-112,
Organism=Homo sapiens, GI32189394, Length=375, Percent_Identity=24.2666666666667, Blast_Score=98, Evalue=3e-20,
Organism=Homo sapiens, GI19913426, Length=310, Percent_Identity=25.8064516129032, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI19913428, Length=311, Percent_Identity=26.0450160771704, Blast_Score=87, Evalue=8e-17,
Organism=Escherichia coli, GI1790172, Length=461, Percent_Identity=44.0347071583514, Blast_Score=385, Evalue=1e-108,
Organism=Escherichia coli, GI1788251, Length=270, Percent_Identity=35.9259259259259, Blast_Score=134, Evalue=2e-32,
Organism=Escherichia coli, GI1790170, Length=340, Percent_Identity=24.1176470588235, Blast_Score=85, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI71988080, Length=478, Percent_Identity=44.7698744769874, Blast_Score=414, Evalue=1e-116,
Organism=Caenorhabditis elegans, GI71988063, Length=478, Percent_Identity=44.7698744769874, Blast_Score=414, Evalue=1e-116,
Organism=Caenorhabditis elegans, GI71988074, Length=478, Percent_Identity=41.2133891213389, Blast_Score=368, Evalue=1e-102,
Organism=Caenorhabditis elegans, GI17510931, Length=348, Percent_Identity=26.1494252873563, Blast_Score=95, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17570191, Length=309, Percent_Identity=26.537216828479, Blast_Score=91, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI25144756, Length=375, Percent_Identity=23.7333333333333, Blast_Score=91, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6319370, Length=447, Percent_Identity=47.8747203579418, Blast_Score=408, Evalue=1e-114,
Organism=Saccharomyces cerevisiae, GI6319603, Length=295, Percent_Identity=26.7796610169492, Blast_Score=94, Evalue=5e-20,
Organism=Saccharomyces cerevisiae, GI6322581, Length=409, Percent_Identity=23.7163814180929, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24658560, Length=456, Percent_Identity=45.6140350877193, Blast_Score=409, Evalue=1e-114,
Organism=Drosophila melanogaster, GI281361666, Length=315, Percent_Identity=26.3492063492064, Blast_Score=97, Evalue=5e-20,
Organism=Drosophila melanogaster, GI24646341, Length=315, Percent_Identity=26.3492063492064, Blast_Score=97, Evalue=5e-20,
Organism=Drosophila melanogaster, GI17136796, Length=315, Percent_Identity=26.3492063492064, Blast_Score=97, Evalue=5e-20,
Organism=Drosophila melanogaster, GI24638766, Length=375, Percent_Identity=23.7333333333333, Blast_Score=92, Evalue=9e-19,
Organism=Drosophila melanogaster, GI28574560, Length=374, Percent_Identity=23.7967914438503, Blast_Score=79, Evalue=8e-15,

Paralogues:

None

Copy number: 9,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020003
- InterPro:   IPR000194
- InterPro:   IPR005294
- InterPro:   IPR017458
- InterPro:   IPR018118
- InterPro:   IPR000793
- InterPro:   IPR004100 [H]

Pfam domain/function: PF00006 ATP-synt_ab; PF00306 ATP-synt_ab_C; PF02874 ATP-synt_ab_N [H]

EC number: =3.6.3.14 [H]

Molecular weight: Translated: 69788; Mature: 69657

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPTPDAPAAAAADAATGAGWLARRRGALARVALAPVAQAIGRVERVADGIAFVSGLEDT
CCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLNEVLRFEGGVTGFAHTLDEDLISVVLLDPDAGVRAQTAVARTGAVLEVPAGPQLLGRV
HHHHHHHHCCCCCHHHHHHHHHCEEEEEECCCCCCCHHHHHHHCCCEEECCCCHHHHHHH
VDPLGRPLDGGAPLDAAHTLPIERAAPAIIERDLVSEPLDTGVLIVDALFTIGRGQRELI
HHHHCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEE
IGDRATGKTSLAIDAIVNQRHSDVICVYVAIGQRASAVRRVIDAVRRYGAPERCVFVVAP
EECCCCCCHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEEEC
AACAPGLQWIAPFAGFSIAEYFRDRGQHALVVVDDLTKHAATHRELALLTREPPGREAYP
HHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHEEECCCCCCCCCC
GDIFYVHARLLERAAKLSAALGGGSLSALPIAETDAGNLAAYIPTNLISITDGQIVLDSA
CCHHHHHHHHHHHHHHHHHHCCCCCEEECEECCCCCCCEEEECCCCEEEECCCCEEEHHH
LFAANQRPAVDVGLSVSRVGGKAQHPALRAASGRLRLDYAQFLELEAFTRFGGLTDARLR
HHHCCCCCCEEECCCHHHCCCCCCCCHHHHCCCCEEECHHHHHHHHHHHHHCCCCCHHHH
AQITRGERIRALITQPRFRALRTLDEVVLLKALAAGALDAMSPDLVAPLRERLPAWLDAR
HHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHH
IAALTPALAPPRDWLADDAALDALAESVGELIERIAADAARRATAGMPAEDAAGDIGGAF
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCC
GGEQARGDADRDADHGANREVSREVSPEASREVSREVSCEVSHEADRDAAADAARVAGRA
CCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHCEEECCCCCCHHHHHHHHHHCCC
PGRAEPDRAAPRAMPDGPPRAQADGDRASASRPRPDARGDAARTAPSPQGGADANVDAEA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
EARHKR
HHHCCC
>Mature Secondary Structure 
TPTPDAPAAAAADAATGAGWLARRRGALARVALAPVAQAIGRVERVADGIAFVSGLEDT
CCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLNEVLRFEGGVTGFAHTLDEDLISVVLLDPDAGVRAQTAVARTGAVLEVPAGPQLLGRV
HHHHHHHHCCCCCHHHHHHHHHCEEEEEECCCCCCCHHHHHHHCCCEEECCCCHHHHHHH
VDPLGRPLDGGAPLDAAHTLPIERAAPAIIERDLVSEPLDTGVLIVDALFTIGRGQRELI
HHHHCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEE
IGDRATGKTSLAIDAIVNQRHSDVICVYVAIGQRASAVRRVIDAVRRYGAPERCVFVVAP
EECCCCCCHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEEEC
AACAPGLQWIAPFAGFSIAEYFRDRGQHALVVVDDLTKHAATHRELALLTREPPGREAYP
HHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHEEECCCCCCCCCC
GDIFYVHARLLERAAKLSAALGGGSLSALPIAETDAGNLAAYIPTNLISITDGQIVLDSA
CCHHHHHHHHHHHHHHHHHHCCCCCEEECEECCCCCCCEEEECCCCEEEECCCCEEEHHH
LFAANQRPAVDVGLSVSRVGGKAQHPALRAASGRLRLDYAQFLELEAFTRFGGLTDARLR
HHHCCCCCCEEECCCHHHCCCCCCCCHHHHCCCCEEECHHHHHHHHHHHHHCCCCCHHHH
AQITRGERIRALITQPRFRALRTLDEVVLLKALAAGALDAMSPDLVAPLRERLPAWLDAR
HHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHH
IAALTPALAPPRDWLADDAALDALAESVGELIERIAADAARRATAGMPAEDAAGDIGGAF
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCC
GGEQARGDADRDADHGANREVSREVSPEASREVSREVSCEVSHEADRDAAADAARVAGRA
CCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHCEEECCCCCCHHHHHHHHHHCCC
PGRAEPDRAAPRAMPDGPPRAQADGDRASASRPRPDARGDAARTAPSPQGGADANVDAEA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
EARHKR
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA