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The map label for this gene is ynfJ [C]

Identifier: 53722888

GI number: 53722888

Start: 2537573

End: 2538856

Strand: Reverse

Name: ynfJ [C]

Synonym: BPSS1868

Alternate gene names: 53722888

Gene position: 2538856-2537573 (Counterclockwise)

Preceding gene: 53722889

Following gene: 53722886

Centisome position: 80.01

GC content: 72.59

Gene sequence:

>1284_bases
ATGAAACGTCTGCACGCTTTCGAGCCCGTCGCGGCGCTCGCGCATCTGTGCCGCTGGCTCGCGCTGTCAGCCGTCGTCGG
CGCGCTCGCCGGCTCGGCGTCCGCGCTCCTCCTGTGGGCGCTCGATCTTGCCACCGGCACGCGCATCGCGCATCCGTGGC
TGCTGTGGCTGCTGCCCGCGGCGGGTTTCGCGACGGGCTGGGTCTATCATCGCGTCGGCCGTAGTGTCGAGCGCGGCAAC
AATCTGCTGATCGACGAGATTCACGATCCGCGGGCGATCGTGCCCACGCGCATGGCGCCGCTCGTGCTCGTCGCGACCGT
CGTCACGCACCTGTTCGGCGGCTCCGCGGGGCGCGAAGGCACCGCGGTGCAGATGGGCGGCGCGCTCGCCGATCGCGTCA
CGCAGCTCGTCGGGCTCGATCGCGACGCGCGCCGCATCATGCTGATGGGCGGGATCGCCGCGGGCTTCTCGTCGGTGTTC
GGCACGCCGCTCGCGGGCGCGGTGTTCGGTCTCGAAGTGCTCGCGATCGGCCGGCTGCGCTACGACGCGCTCTTCGCCTG
CGTCGCGGCGTCGATCGTCGCGGACGCGGTGTGCCGGCTATGGGGCGTCCATCACACCGTCTACGTCGTGCCTTTCGTGC
CCGCGCCGAGCGCGGCGGGCGTCGCGTCGGCGGTGGCGGCGGGCATCGCGTTCGGTGTCGTCGGCCGGCTGTTCGCCGCC
GCCACGCACGGGCTCGCCGCGCTCGCGAAGCGCCGGATCGCGTATCCGCCGCTGCGGCCCGTCGCGGGCGGCGCGCTCGT
CGCGCTCGCGGCGACGCTGCTGCATGCGCCGCAGTATCTCGGCCTCGGCATCCCGACGATCGAGGCCGCGTTTCGCGCGC
CGTTGCCCGTCTACGATTTCGCGGGCAAGTTCGCGTTCACGGTCGTCACGCTCGCGTCGGGCTTCAAGGGCGGCGAAGTG
ACGCCGCTCTTCTATATCGGCGCGACGCTCGGTAACGCGCTGTCGCCTCTGCTCGCGCTGCCGGCGCCGGTGCTCGCGGG
GCTCGGCTTCGTCGCGGTGTTCGCCGGCGCGGCGAACACGCCGATCGCGTCGACGATCATGGCGATCGAGTTGTTCGGCG
CGCCGATCGGCGTGTATGCGGCGCTGGCCTGCGTCGTCGCGTATCTGTTCTCCGGGCACGCTGGCATCTATCGCGCGCAG
CGGATCGGTCACGCGAAGCTGCCCGGGCCGCGCGGCGATGTGCGCGTCGCGAAGTCGGCGGCGGGGCAGACGACGCCGCG
CTGA

Upstream 100 bases:

>100_bases
GATGATGCCTACGCGTTCCTGGGTGCAGGAGGTCGTAGGCCATCCGTGACAAGCGGCGTCCTGCCGCCCGGGTTTGATGT
CCTGTCGAATCTGGAAATTC

Downstream 100 bases:

>100_bases
GCACGCGGCGCGGCGGCGAGCCGGGCACGCGCGCTCGTGCCCGCTCGTGCTCGCTCGTGCGCGCGCCGGATGCGATGCGC
CCGCGCCGATCGCGTTGCCA

Product: voltage gated chloride channel membrane protein

Products: NA

Alternate protein names: Chloride Channel Core; Voltage-Gated Chloride Channel Family Protein; Voltage-Gated Chloride Channel; Chloride Channel Protein; Chloride Channel Protein EriC; Voltage Gated Chloride Channel Protein; Cl- Channel Voltage Gated; Permease Chloride Channel; Chloride Channel Voltage Gated Protein; Voltage-Gated Chloride Channel Protein; Chloride Channel; Voltage Gated Chloride Channel Family Protein; Chloride Channel Family Protein; Chloride Transporter Chloride Channel Family; Chloride Ion Channel Protein; Chloride Channel Protein CIC Family; Voltage Gated Chloride Channel Family; Permease Chloride Channel; Voltage Gated Chloride Channel; Chloride Channel Voltage Gated Family Protein; (Voltage-Gated) Chloride Channel Family Protein; Multi-Sensor Signal Transduction Histidine Kinase

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MKRLHAFEPVAALAHLCRWLALSAVVGALAGSASALLLWALDLATGTRIAHPWLLWLLPAAGFATGWVYHRVGRSVERGN
NLLIDEIHDPRAIVPTRMAPLVLVATVVTHLFGGSAGREGTAVQMGGALADRVTQLVGLDRDARRIMLMGGIAAGFSSVF
GTPLAGAVFGLEVLAIGRLRYDALFACVAASIVADAVCRLWGVHHTVYVVPFVPAPSAAGVASAVAAGIAFGVVGRLFAA
ATHGLAALAKRRIAYPPLRPVAGGALVALAATLLHAPQYLGLGIPTIEAAFRAPLPVYDFAGKFAFTVVTLASGFKGGEV
TPLFYIGATLGNALSPLLALPAPVLAGLGFVAVFAGAANTPIASTIMAIELFGAPIGVYAALACVVAYLFSGHAGIYRAQ
RIGHAKLPGPRGDVRVAKSAAGQTTPR

Sequences:

>Translated_427_residues
MKRLHAFEPVAALAHLCRWLALSAVVGALAGSASALLLWALDLATGTRIAHPWLLWLLPAAGFATGWVYHRVGRSVERGN
NLLIDEIHDPRAIVPTRMAPLVLVATVVTHLFGGSAGREGTAVQMGGALADRVTQLVGLDRDARRIMLMGGIAAGFSSVF
GTPLAGAVFGLEVLAIGRLRYDALFACVAASIVADAVCRLWGVHHTVYVVPFVPAPSAAGVASAVAAGIAFGVVGRLFAA
ATHGLAALAKRRIAYPPLRPVAGGALVALAATLLHAPQYLGLGIPTIEAAFRAPLPVYDFAGKFAFTVVTLASGFKGGEV
TPLFYIGATLGNALSPLLALPAPVLAGLGFVAVFAGAANTPIASTIMAIELFGAPIGVYAALACVVAYLFSGHAGIYRAQ
RIGHAKLPGPRGDVRVAKSAAGQTTPR
>Mature_427_residues
MKRLHAFEPVAALAHLCRWLALSAVVGALAGSASALLLWALDLATGTRIAHPWLLWLLPAAGFATGWVYHRVGRSVERGN
NLLIDEIHDPRAIVPTRMAPLVLVATVVTHLFGGSAGREGTAVQMGGALADRVTQLVGLDRDARRIMLMGGIAAGFSSVF
GTPLAGAVFGLEVLAIGRLRYDALFACVAASIVADAVCRLWGVHHTVYVVPFVPAPSAAGVASAVAAGIAFGVVGRLFAA
ATHGLAALAKRRIAYPPLRPVAGGALVALAATLLHAPQYLGLGIPTIEAAFRAPLPVYDFAGKFAFTVVTLASGFKGGEV
TPLFYIGATLGNALSPLLALPAPVLAGLGFVAVFAGAANTPIASTIMAIELFGAPIGVYAALACVVAYLFSGHAGIYRAQ
RIGHAKLPGPRGDVRVAKSAAGQTTPR

Specific function: Unknown

COG id: COG0038

COG function: function code P; Chloride channel protein EriC

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43854; Mature: 43854

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLHAFEPVAALAHLCRWLALSAVVGALAGSASALLLWALDLATGTRIAHPWLLWLLPA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH
AGFATGWVYHRVGRSVERGNNLLIDEIHDPRAIVPTRMAPLVLVATVVTHLFGGSAGREG
HHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
TAVQMGGALADRVTQLVGLDRDARRIMLMGGIAAGFSSVFGTPLAGAVFGLEVLAIGRLR
CEEEECHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
YDALFACVAASIVADAVCRLWGVHHTVYVVPFVPAPSAAGVASAVAAGIAFGVVGRLFAA
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
ATHGLAALAKRRIAYPPLRPVAGGALVALAATLLHAPQYLGLGIPTIEAAFRAPLPVYDF
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCHHHHHHCCCCCHHHH
AGKFAFTVVTLASGFKGGEVTPLFYIGATLGNALSPLLALPAPVLAGLGFVAVFAGAANT
HHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC
PIASTIMAIELFGAPIGVYAALACVVAYLFSGHAGIYRAQRIGHAKLPGPRGDVRVAKSA
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCHHHHHHC
AGQTTPR
CCCCCCC
>Mature Secondary Structure
MKRLHAFEPVAALAHLCRWLALSAVVGALAGSASALLLWALDLATGTRIAHPWLLWLLPA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH
AGFATGWVYHRVGRSVERGNNLLIDEIHDPRAIVPTRMAPLVLVATVVTHLFGGSAGREG
HHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
TAVQMGGALADRVTQLVGLDRDARRIMLMGGIAAGFSSVFGTPLAGAVFGLEVLAIGRLR
CEEEECHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
YDALFACVAASIVADAVCRLWGVHHTVYVVPFVPAPSAAGVASAVAAGIAFGVVGRLFAA
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
ATHGLAALAKRRIAYPPLRPVAGGALVALAATLLHAPQYLGLGIPTIEAAFRAPLPVYDF
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCHHHHHHCCCCCHHHH
AGKFAFTVVTLASGFKGGEVTPLFYIGATLGNALSPLLALPAPVLAGLGFVAVFAGAANT
HHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC
PIASTIMAIELFGAPIGVYAALACVVAYLFSGHAGIYRAQRIGHAKLPGPRGDVRVAKSA
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCHHHHHHC
AGQTTPR
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA