| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53722882
Identifier: 53722882
GI number: 53722882
Start: 2530933
End: 2531631
Strand: Reverse
Name: 53722882
Synonym: BPSS1863
Alternate gene names: NA
Gene position: 2531631-2530933 (Counterclockwise)
Preceding gene: 53722886
Following gene: 53722880
Centisome position: 79.79
GC content: 72.68
Gene sequence:
>699_bases ATGACCATCGAAGTGGGATTACTGTTGTTTCCGCAGGTGCAGCAGCTCGACCTGACCGGCCCGCACGACGTGTTCGCATC GCTGCCCGGCGTCACGGTGCGGCTCGTGTGGAAAACGCGCGAGCCGGTGGCGTCGAGCAGCGGGCTCGTGCTTGCGCCGA ACGCGACGTTCGACGATTGCCCGCCGCTCGATGTGATTTGCGTGCCGGGCGGCATCGGCGTCGCCGATCTGATGGAGGAT GCGGACACGCTCGCGTTTTTGCGCCGGCACGCGGCGCATGCGCGCTACGTGAGCTCGGTGTGCACGGGCGCGCTCGTGCT CGGCGCGGCGGGGCTGCTGCGCGGGCGGCGCGCGACGACGCACTGGGCGTTCCATTCGCTGCTCGCGCCGTTCGGCGCGA CGCCGGTACGCGAGCGCGTCGTGCGCGACGGCAATCTCGTGACGGGCGGCGGCGTGACCGCGGGGATCGATTTCGCGCTG ACGCTCGCGGCCGAGCTCGTCGGCGAGGACGATGCGCAGGCGGTGCAGTTGCAGCTCGAATATGCGCCGGCCCCGCCGTT CGCGGCGGGCGATCCGGATACCGCGCCGGCGCGGATCGTCGAGCGCATGCGCGAGCGGTCGAAGCCGGTGCTCGCGCGGC GCGAGCAGGTGGTCGCGCGCGCCGTGGCGGCGCTCGAGCGGCGGCGCGCCGACGGGTGA
Upstream 100 bases:
>100_bases TGCGTACAGTCGGTTTGTCCATCGCGCCGGTGCGGTCGGCGCGAGCCGGCGCGACGCTCATGATGTTGACGTGACGTTGA TGAACTGGAGGAGGTTCGGC
Downstream 100 bases:
>100_bases TGCACGTTGCCCGCTGATTGACGGCCCCGCGCGCAAGCGCAGGCCGGGGGTGGCGGCGCGAGGGGCGCCGCCGGATTGCG GGGCGCGGCTCGCCGCCGCG
Product: DJ-1/PfpI family protein
Products: NA
Alternate protein names: ThiJ/PfpI Domain Protein; ThiJ/PfpI Family Protein; Transcriptional Regulator; AraC Family Transcriptional Regulator; Transcriptional Regulator AraC Family; ThiJ/PfpI; DJ-1/PfpI Family Protein; Isonitrile Hydratase; ThiJ Family Protein; DJ-1/PfpI Family; Intracellular Protease/Amidase; Transcription Regulator Protein; DJ-1/PfpI Superfamily Protein; Twin-Arginine Translocation Pathway Signal; PfpI Family Protein; AraC Family Regulatory Helix-Turn-Helix Protein; Cyclohexyl-Isocyanide Hydratase; Hydratase; ThiH/PfpI Family Amidotransferase; ADPA Family Transcriptional Regulator; Transcriptional Regulatory Protein; AraC Family Transcription Regulator; Transcriptional Regulator DarR; Thij/Pfpi Family Protein; Transcription Regulator Protein ThiJ/PfpI; Transcriptional Regulator Protein Thij/Pfpi; Transcriptional Regulator Protein; ThiJ/PfpI Family Transcriptional Regulator Protein; DsbA Family ThiolDisulfide Interchange Protein; Transcription Regulator Protein Thij/Pfpi; Transcriptional Regulator ThiJ/PfpI Family Protein; Secreted Protein; ThiJ/PfpI Family Transcriptional Regulator
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MTIEVGLLLFPQVQQLDLTGPHDVFASLPGVTVRLVWKTREPVASSSGLVLAPNATFDDCPPLDVICVPGGIGVADLMED ADTLAFLRRHAAHARYVSSVCTGALVLGAAGLLRGRRATTHWAFHSLLAPFGATPVRERVVRDGNLVTGGGVTAGIDFAL TLAAELVGEDDAQAVQLQLEYAPAPPFAAGDPDTAPARIVERMRERSKPVLARREQVVARAVAALERRRADG
Sequences:
>Translated_232_residues MTIEVGLLLFPQVQQLDLTGPHDVFASLPGVTVRLVWKTREPVASSSGLVLAPNATFDDCPPLDVICVPGGIGVADLMED ADTLAFLRRHAAHARYVSSVCTGALVLGAAGLLRGRRATTHWAFHSLLAPFGATPVRERVVRDGNLVTGGGVTAGIDFAL TLAAELVGEDDAQAVQLQLEYAPAPPFAAGDPDTAPARIVERMRERSKPVLARREQVVARAVAALERRRADG >Mature_231_residues TIEVGLLLFPQVQQLDLTGPHDVFASLPGVTVRLVWKTREPVASSSGLVLAPNATFDDCPPLDVICVPGGIGVADLMEDA DTLAFLRRHAAHARYVSSVCTGALVLGAAGLLRGRRATTHWAFHSLLAPFGATPVRERVVRDGNLVTGGGVTAGIDFALT LAAELVGEDDAQAVQLQLEYAPAPPFAAGDPDTAPARIVERMRERSKPVLARREQVVARAVAALERRRADG
Specific function: Unknown
COG id: COG0693
COG function: function code R; Putative intracellular protease/amidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24584; Mature: 24453
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIEVGLLLFPQVQQLDLTGPHDVFASLPGVTVRLVWKTREPVASSSGLVLAPNATFDDC CEEEEEEEECCCHHEECCCCHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCC PPLDVICVPGGIGVADLMEDADTLAFLRRHAAHARYVSSVCTGALVLGAAGLLRGRRATT CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH HWAFHSLLAPFGATPVRERVVRDGNLVTGGGVTAGIDFALTLAAELVGEDDAQAVQLQLE HHHHHHHHHHCCCCHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEE YAPAPPFAAGDPDTAPARIVERMRERSKPVLARREQVVARAVAALERRRADG ECCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TIEVGLLLFPQVQQLDLTGPHDVFASLPGVTVRLVWKTREPVASSSGLVLAPNATFDDC EEEEEEEECCCHHEECCCCHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCC PPLDVICVPGGIGVADLMEDADTLAFLRRHAAHARYVSSVCTGALVLGAAGLLRGRRATT CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH HWAFHSLLAPFGATPVRERVVRDGNLVTGGGVTAGIDFALTLAAELVGEDDAQAVQLQLE HHHHHHHHHHCCCCHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEE YAPAPPFAAGDPDTAPARIVERMRERSKPVLARREQVVARAVAALERRRADG ECCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA