| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53722863
Identifier: 53722863
GI number: 53722863
Start: 2505912
End: 2506265
Strand: Reverse
Name: 53722863
Synonym: BPSS1844
Alternate gene names: NA
Gene position: 2506265-2505912 (Counterclockwise)
Preceding gene: 53722868
Following gene: 53722862
Centisome position: 78.99
GC content: 67.23
Gene sequence:
>354_bases ATGAGCTACATGTTGTTGATCGTCGAGCCGCGAGGCCAGCGCTCGGCGCGCACGCGGGCCGAAGGCGAGGCCCTGTACGA GCGGATGCGCCACTTCGCCGGCGAACTTCAGTCGCGCGGCGTGCTGATCGGCGCCGAATCGCTCGTGTCCGACGACCAGT CGACGCGCGTGCAGGTGCGCAACGGCGAGGTGCGCCTTGTCGACGGGCCGTATGCCGAGGCGAAGGAAATGGTCGGCGGT TTCTTCCTGCTCGATGTCGGGACGCAAGGCGAGGCGCTCGCGATCGCGAAGGATTGTCCCGCCGCCGAATGGTGCTCGGT CGAAGTGCGAGAAATCGGGCCGTGCTTCCGGTAG
Upstream 100 bases:
>100_bases GCAGCCCGCTCAAAATAGAGCCGCAGCCGTTTCGCGATCGGCGGCGCGACGTGGTCGCGCCGCGCGATCATGGAAGACGT CGTCATAGGAGGTGACGCAA
Downstream 100 bases:
>100_bases GCGCGCGAGAATCGGCGCGACCGGCTGCCGCCGTGGGCCGGTCGCCTCGTTGAGCGAGGGGTTTCCCTTAATTTTTCGCG TCGCGTGTCGAGTGGGGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: YCII-Related Protein; YCII-Like Protein; DGPFAETKE Domain-Containing Protein; DGPF Protein; Dgpfaetke; DGPF Domain-Containing Protein; DGPF Domain-Containing; Dgpf Family Protein; DGPF Domain Superfamily
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MSYMLLIVEPRGQRSARTRAEGEALYERMRHFAGELQSRGVLIGAESLVSDDQSTRVQVRNGEVRLVDGPYAEAKEMVGG FFLLDVGTQGEALAIAKDCPAAEWCSVEVREIGPCFR
Sequences:
>Translated_117_residues MSYMLLIVEPRGQRSARTRAEGEALYERMRHFAGELQSRGVLIGAESLVSDDQSTRVQVRNGEVRLVDGPYAEAKEMVGG FFLLDVGTQGEALAIAKDCPAAEWCSVEVREIGPCFR >Mature_116_residues SYMLLIVEPRGQRSARTRAEGEALYERMRHFAGELQSRGVLIGAESLVSDDQSTRVQVRNGEVRLVDGPYAEAKEMVGGF FLLDVGTQGEALAIAKDCPAAEWCSVEVREIGPCFR
Specific function: Unknown
COG id: COG3795
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12907; Mature: 12776
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYMLLIVEPRGQRSARTRAEGEALYERMRHFAGELQSRGVLIGAESLVSDDQSTRVQVR CCEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHCCCCCCEEEEE NGEVRLVDGPYAEAKEMVGGFFLLDVGTQGEALAIAKDCPAAEWCSVEVREIGPCFR CCCEEEEECCCHHHHHHHCEEEEEEECCCCCEEEEECCCCCCCCCEEEHHHCCCCCC >Mature Secondary Structure SYMLLIVEPRGQRSARTRAEGEALYERMRHFAGELQSRGVLIGAESLVSDDQSTRVQVR CEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHCCCCCCEEEEE NGEVRLVDGPYAEAKEMVGGFFLLDVGTQGEALAIAKDCPAAEWCSVEVREIGPCFR CCCEEEEECCCHHHHHHHCEEEEEEECCCCCEEEEECCCCCCCCCEEEHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA