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The map label for this gene is glpC [H]

Identifier: 53722857

GI number: 53722857

Start: 2499763

End: 2501100

Strand: Reverse

Name: glpC [H]

Synonym: BPSS1838

Alternate gene names: 53722857

Gene position: 2501100-2499763 (Counterclockwise)

Preceding gene: 53722858

Following gene: 53722856

Centisome position: 78.82

GC content: 68.61

Gene sequence:

>1338_bases
ATGTCCCACCGCGAAGGCAGTCTGGAGGCCCCGACCCGGCACCCGCTCGATTGGCGCTCGGACGCGTTCTACGATCAGGC
GGCGATCGACGCCGAGCTCGCGCGCGTGTTCGACATCTGCGCGGGCTGCCGGCGCTGCGTGTCGCTGTGCGGCGCGTTCC
CGACGCTGTTCGATCTCGTCGACGAGACCGAGACGGGCGAGGCGCATGCGGTCGATCCGAAGTCGTTCGGCAAGGTCGTC
GACCAATGCTACCTGTGCGACCTCTGCTACATGACGAAATGCCCGTACGTGCCGCCGCATCCGTGGAACGTCGACTTTCC
GCACCTGATGTTGCGCGCGCGGGCCGCGCGCTACAGGCGCAACGAAGTCAGGCTGCGCGACAAGCTGCTGTCGAACACCG
ACATGCTCGGCCATTTCGCCGGCATTCCGATCGTCACGCAGGCCGTCAATGCGGCGAACCGCACGCCGGCGATGCGCGGC
GCGCTCGAGGCGACGTTCGGCGTCGACCGGCGCGCGTGGCTGCCGCCGTTCGCATCGCGCAAGTTCCGCCGGGCCGCGCC
GCGCTCGCCCGCCCCGCCGCCGCGCGACGGCGAGCGCACGCCGGGGCGCGTCGCGATCTACGCGACCTGTTACGTGAACT
ACAACGAACCCGGCATCGGCCACGATCTGCTCGCGGTGCTCGCGCACAACGGCATTCCGTACGAACTCGTCGCGAGCGAA
GCGTGCTGCGGGATGCCGCTGCTCGAGCAGGGCAATCTCGAAGGCGTCGCCGCGAAGAAGGCGGCGAACATCCCCGTGCT
CGCCCGCCATGCGCGGGAAGGCCATGCGCTGATCGGCGCGATTCCGAGCTGCGTGCTGATGTACAAGAGCGAGTTGCCGC
TGATGTTCCCCGACGATGCCGACGTGCGCGCGGTGGCCGACGCGTTCTGGGATCCGTTCGAGTACATGATCGCGCGCCAT
CGCGACGGGCTGCTGAAGACCGATTTCAAGCACGAGCTCGGCGTCGTGTCGTACCACGTGCCGTGTCATGCGCGCGTGCA
GAACATCGGGCGCAAGGCTGCGGACGCGCTGTCGCTCGTGCCGGGCACGAAGGTGAAGGTCGTCGAGCGCTGCTCGGGCC
ACGCGGGCACGTTCGGCGTGAAGCGGGAGTTCCACGCGCAGGCGCTGAAGATCGGCGCGCCGGTATTCAACGCGATCGCG
GAGCAGGCGCCCGATTACATGTCGTCGGATTGCGCGCTCGCGGGGCACCATATCGAAGAGGGCATCGGCGCGAAGGGCGT
CGAGCCGCCGCCCTTCGCGCATCCGATCACGTTGCTGCGCAGGGCCTACGGCATCTGA

Upstream 100 bases:

>100_bases
GCGCGCGCCGCACACGGTCAGCCGGCGCGGCCGCGCGTGCGCGCCACCCGCGCGATCCGGCGCAGCGCGCGCGCCGCGCG
CAACGTGATGGAGCCCCCCC

Downstream 100 bases:

>100_bases
GCGCGCCGCAGACGAGGACCATGCGATGACGCTTACCCGCGATTCGCTGTTGACGCTCGAAGCGTACGCGAAAGTACGCC
GCCAGGAGCATGCGCGCGTG

Product: ferredoxin

Products: FADH2; dihydroxy-acetone-phosphate [C]

Alternate protein names: G-3-P dehydrogenase [H]

Number of amino acids: Translated: 445; Mature: 444

Protein sequence:

>445_residues
MSHREGSLEAPTRHPLDWRSDAFYDQAAIDAELARVFDICAGCRRCVSLCGAFPTLFDLVDETETGEAHAVDPKSFGKVV
DQCYLCDLCYMTKCPYVPPHPWNVDFPHLMLRARAARYRRNEVRLRDKLLSNTDMLGHFAGIPIVTQAVNAANRTPAMRG
ALEATFGVDRRAWLPPFASRKFRRAAPRSPAPPPRDGERTPGRVAIYATCYVNYNEPGIGHDLLAVLAHNGIPYELVASE
ACCGMPLLEQGNLEGVAAKKAANIPVLARHAREGHALIGAIPSCVLMYKSELPLMFPDDADVRAVADAFWDPFEYMIARH
RDGLLKTDFKHELGVVSYHVPCHARVQNIGRKAADALSLVPGTKVKVVERCSGHAGTFGVKREFHAQALKIGAPVFNAIA
EQAPDYMSSDCALAGHHIEEGIGAKGVEPPPFAHPITLLRRAYGI

Sequences:

>Translated_445_residues
MSHREGSLEAPTRHPLDWRSDAFYDQAAIDAELARVFDICAGCRRCVSLCGAFPTLFDLVDETETGEAHAVDPKSFGKVV
DQCYLCDLCYMTKCPYVPPHPWNVDFPHLMLRARAARYRRNEVRLRDKLLSNTDMLGHFAGIPIVTQAVNAANRTPAMRG
ALEATFGVDRRAWLPPFASRKFRRAAPRSPAPPPRDGERTPGRVAIYATCYVNYNEPGIGHDLLAVLAHNGIPYELVASE
ACCGMPLLEQGNLEGVAAKKAANIPVLARHAREGHALIGAIPSCVLMYKSELPLMFPDDADVRAVADAFWDPFEYMIARH
RDGLLKTDFKHELGVVSYHVPCHARVQNIGRKAADALSLVPGTKVKVVERCSGHAGTFGVKREFHAQALKIGAPVFNAIA
EQAPDYMSSDCALAGHHIEEGIGAKGVEPPPFAHPITLLRRAYGI
>Mature_444_residues
SHREGSLEAPTRHPLDWRSDAFYDQAAIDAELARVFDICAGCRRCVSLCGAFPTLFDLVDETETGEAHAVDPKSFGKVVD
QCYLCDLCYMTKCPYVPPHPWNVDFPHLMLRARAARYRRNEVRLRDKLLSNTDMLGHFAGIPIVTQAVNAANRTPAMRGA
LEATFGVDRRAWLPPFASRKFRRAAPRSPAPPPRDGERTPGRVAIYATCYVNYNEPGIGHDLLAVLAHNGIPYELVASEA
CCGMPLLEQGNLEGVAAKKAANIPVLARHAREGHALIGAIPSCVLMYKSELPLMFPDDADVRAVADAFWDPFEYMIARHR
DGLLKTDFKHELGVVSYHVPCHARVQNIGRKAADALSLVPGTKVKVVERCSGHAGTFGVKREFHAQALKIGAPVFNAIAE
QAPDYMSSDCALAGHHIEEGIGAKGVEPPPFAHPITLLRRAYGI

Specific function: Electron transfer protein; may also function as the membrane anchor for the glpAB dimer [H]

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein. Note=Loosely bound to the cytoplasmic membrane often occurring in vesicles associated with fumarate reductase [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788576, Length=346, Percent_Identity=29.4797687861272, Blast_Score=137, Evalue=2e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR017753
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 48832; Mature: 48700

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHREGSLEAPTRHPLDWRSDAFYDQAAIDAELARVFDICAGCRRCVSLCGAFPTLFDLV
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
DETETGEAHAVDPKSFGKVVDQCYLCDLCYMTKCPYVPPHPWNVDFPHLMLRARAARYRR
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
NEVRLRDKLLSNTDMLGHFAGIPIVTQAVNAANRTPAMRGALEATFGVDRRAWLPPFASR
HHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHH
KFRRAAPRSPAPPPRDGERTPGRVAIYATCYVNYNEPGIGHDLLAVLAHNGIPYELVASE
HHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHCCCCCHHHHHCH
ACCGMPLLEQGNLEGVAAKKAANIPVLARHAREGHALIGAIPSCVLMYKSELPLMFPDDA
HHCCCCCCCCCCCCCHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCEECCCCC
DVRAVADAFWDPFEYMIARHRDGLLKTDFKHELGVVSYHVPCHARVQNIGRKAADALSLV
HHHHHHHHHHCHHHHHHHHHCCCCCCCCHHHHCCEEEEECCHHHHHHHHHHHHHHHHHCC
PGTKVKVVERCSGHAGTFGVKREFHAQALKIGAPVFNAIAEQAPDYMSSDCALAGHHIEE
CCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCHHHCCCCHHHCHHHHH
GIGAKGVEPPPFAHPITLLRRAYGI
CCCCCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
SHREGSLEAPTRHPLDWRSDAFYDQAAIDAELARVFDICAGCRRCVSLCGAFPTLFDLV
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
DETETGEAHAVDPKSFGKVVDQCYLCDLCYMTKCPYVPPHPWNVDFPHLMLRARAARYRR
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
NEVRLRDKLLSNTDMLGHFAGIPIVTQAVNAANRTPAMRGALEATFGVDRRAWLPPFASR
HHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHH
KFRRAAPRSPAPPPRDGERTPGRVAIYATCYVNYNEPGIGHDLLAVLAHNGIPYELVASE
HHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHCCCCCHHHHHCH
ACCGMPLLEQGNLEGVAAKKAANIPVLARHAREGHALIGAIPSCVLMYKSELPLMFPDDA
HHCCCCCCCCCCCCCHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCEECCCCC
DVRAVADAFWDPFEYMIARHRDGLLKTDFKHELGVVSYHVPCHARVQNIGRKAADALSLV
HHHHHHHHHHCHHHHHHHHHCCCCCCCCHHHHCCEEEEECCHHHHHHHHHHHHHHHHHCC
PGTKVKVVERCSGHAGTFGVKREFHAQALKIGAPVFNAIAEQAPDYMSSDCALAGHHIEE
CCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCHHHCCCCHHHCHHHHH
GIGAKGVEPPPFAHPITLLRRAYGI
CCCCCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: FAD; glycerol-3-phosphate [C]

Specific reaction: FAD + glycerol-3-phosphate = FADH2 + dihydroxy-acetone-phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]