| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53722771
Identifier: 53722771
GI number: 53722771
Start: 2400273
End: 2400887
Strand: Reverse
Name: 53722771
Synonym: BPSS1750
Alternate gene names: NA
Gene position: 2400887-2400273 (Counterclockwise)
Preceding gene: 53722772
Following gene: 53722770
Centisome position: 75.67
GC content: 71.54
Gene sequence:
>615_bases ATGCCGATCGATTCCGCTTCGCGCCAATGGGCGCCCGCCGCAGAACGCAATCGCGAGCCGATTCTCGCCGTGCTGAAGCG CGTACTGCCCGCGCGCGGCGCGGTGCTCGAGATCGCGAGCGGCACCGGCCAGCATGCGGTTCACTTCGCGGCCGCGCTGC CCGATCTCGTCTGGCAGCCGACCGACGTCGACGCCGCCGCGCGCGAGTCGATCGCCGCGTGGGCGGCCGACGCCGCCCTG CCGAACCTGCGCGCGCCGCTCGCGCTCGACGTGTGTGTCGAGCCGTGGCCGCTCGCCGCCGCCGACGCGATTGTCTGCGT CAACATGATCCACATCGCGCCGTGGGCAGCTGTGTGCGCGCTCTTCGTCGGCGCGGCGCGCGCGTTGCCCGACGGCGGCG TGTTGTACCTGTACGGGCCGTATCGCCGAGGCGGCGCGCACACCACTGAATCGAACGCGCAGTTCGATGCGCAATTGCGC CGCCGCAATCCGGCGTGGGGCGTGCGCGATCTGGAAGCGGTGGTCGAACTCGGCGGCGCGTCGGGCCTCGCGCTCGACGA GGTCGTCGAGATGCCGGCGAACAATCTGAGCGTCGTGTTCCGAAAGCGCGCGTAG
Upstream 100 bases:
>100_bases GGGCAGGCGCTCGCCGCGCTCATCGCACGTCTCGGGCTTGCGCAGCGCGACGCGCACGGCTCGCCTCACGTCTGATTCGA TCTTCCCGATTCATTTCGTC
Downstream 100 bases:
>100_bases GCGGGCGCGCCCGACGGACGGGGCATGCGCGGCGCTCGCGCGGGCGTTGATTGGCATTCGACGCACGAAGCGCACGAAAC GCACGAAACGTACGAGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MPIDSASRQWAPAAERNREPILAVLKRVLPARGAVLEIASGTGQHAVHFAAALPDLVWQPTDVDAAARESIAAWAADAAL PNLRAPLALDVCVEPWPLAAADAIVCVNMIHIAPWAAVCALFVGAARALPDGGVLYLYGPYRRGGAHTTESNAQFDAQLR RRNPAWGVRDLEAVVELGGASGLALDEVVEMPANNLSVVFRKRA
Sequences:
>Translated_204_residues MPIDSASRQWAPAAERNREPILAVLKRVLPARGAVLEIASGTGQHAVHFAAALPDLVWQPTDVDAAARESIAAWAADAAL PNLRAPLALDVCVEPWPLAAADAIVCVNMIHIAPWAAVCALFVGAARALPDGGVLYLYGPYRRGGAHTTESNAQFDAQLR RRNPAWGVRDLEAVVELGGASGLALDEVVEMPANNLSVVFRKRA >Mature_203_residues PIDSASRQWAPAAERNREPILAVLKRVLPARGAVLEIASGTGQHAVHFAAALPDLVWQPTDVDAAARESIAAWAADAALP NLRAPLALDVCVEPWPLAAADAIVCVNMIHIAPWAAVCALFVGAARALPDGGVLYLYGPYRRGGAHTTESNAQFDAQLRR RNPAWGVRDLEAVVELGGASGLALDEVVEMPANNLSVVFRKRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI93102387, Length=201, Percent_Identity=48.2587064676617, Blast_Score=164, Evalue=5e-41, Organism=Homo sapiens, GI93102391, Length=144, Percent_Identity=45.8333333333333, Blast_Score=99, Evalue=2e-21, Organism=Homo sapiens, GI93102401, Length=129, Percent_Identity=47.2868217054264, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI93102393, Length=68, Percent_Identity=55.8823529411765, Blast_Score=65, Evalue=3e-11, Organism=Homo sapiens, GI93102395, Length=57, Percent_Identity=64.9122807017544, Blast_Score=65, Evalue=5e-11, Organism=Caenorhabditis elegans, GI71998087, Length=201, Percent_Identity=39.3034825870647, Blast_Score=147, Evalue=3e-36, Organism=Drosophila melanogaster, GI28574095, Length=210, Percent_Identity=38.5714285714286, Blast_Score=146, Evalue=8e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21637; Mature: 21506
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIDSASRQWAPAAERNREPILAVLKRVLPARGAVLEIASGTGQHAVHFAAALPDLVWQP CCCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCC TDVDAAARESIAAWAADAALPNLRAPLALDVCVEPWPLAAADAIVCVNMIHIAPWAAVCA CCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH LFVGAARALPDGGVLYLYGPYRRGGAHTTESNAQFDAQLRRRNPAWGVRDLEAVVELGGA HHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCC SGLALDEVVEMPANNLSVVFRKRA CCCHHHHHHHCCCCCEEEEEEECC >Mature Secondary Structure PIDSASRQWAPAAERNREPILAVLKRVLPARGAVLEIASGTGQHAVHFAAALPDLVWQP CCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCC TDVDAAARESIAAWAADAALPNLRAPLALDVCVEPWPLAAADAIVCVNMIHIAPWAAVCA CCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH LFVGAARALPDGGVLYLYGPYRRGGAHTTESNAQFDAQLRRRNPAWGVRDLEAVVELGGA HHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCC SGLALDEVVEMPANNLSVVFRKRA CCCHHHHHHHCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA