| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53722689
Identifier: 53722689
GI number: 53722689
Start: 2292615
End: 2293382
Strand: Reverse
Name: 53722689
Synonym: BPSS1669
Alternate gene names: NA
Gene position: 2293382-2292615 (Counterclockwise)
Preceding gene: 53722690
Following gene: 53722687
Centisome position: 72.28
GC content: 70.18
Gene sequence:
>768_bases ATGACGCTCGCGCTGCTGACCGTCGTCGCCCTCGTCGCCGCGCTGCTGCGGTTCACGAAGCGCCGCCGCGCGAGCCGGGC GCTGTTCGTCGCGACCGTCGCCGCGTTTTTCGCGATCGGCTGCGGCCTCGTGCCGGCGTGGCTGTTGCGCGCGCTGCAGG CGCCGTATGCGGCAAGGCCGGCGATCGAGTGGGGCGAGCGCAACGCGATCGTGATGCTCGGCCTCGGCACCGAGAAGATC GCGGCGACGGGGGCGGTCGAGCCCGGCACGTTTTCCTATTCGCGGGTCGTCGAGGCGGCGAGCCTTTACCGCGATTGCCG ACGTGCGCGCGCGGATGCCGATTGCAAGATCCTCGTGAGCGGCGGCGACGCGCGCCGCAACGGCGTGCCGGAGGCGAGCG TCTATCGCGACGCGCTGGTCGGCGTCGGCATCGACGCGGCCGACGTGTTGTCCGAGCCGCGCAGCATGAACACGTGGCAG AACGCGCAATTCACGCGCGTCGCGCTGGACGGCTATCGCGCGGACCGCGTGCTGCTCGTCACCTCGGGCATTCACCTGCG GCGAAGCATGCTGTATTTCGCGCATTTCGGCGTCGCCGCGATTGCCGTGCGCGCCGAGTATCTGCAAGCCGTGACGTTCC CGCTGCCGCTCGCGTACAACTTCGCGATCGCCGATCTCGCGCTGCACGAATATCTTGGCATCGCGCGCTACCGGCTGTAC AACGCGCTCGGCTGGAACCCGGCGAGGACGCGGCCGGGCGACGCGTGA
Upstream 100 bases:
>100_bases TTTTCCTCACGACACGCGCAGCCAGCCGGATCGTCTCGCCGCGCCGCCCGCGTCCGCGCGCCTTCGCCTGGGCTTCGGCC TTCACGCCGGAGGCCCTCGC
Downstream 100 bases:
>100_bases GCATGGCGCGCCGCGCGCACGCCGCCGTGGCCCGCTTCGCTGCGTTGCGCACGCATCGAACGGGCCGGCATGAAGGGGCC GGCATCAACGGACCGGCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MTLALLTVVALVAALLRFTKRRRASRALFVATVAAFFAIGCGLVPAWLLRALQAPYAARPAIEWGERNAIVMLGLGTEKI AATGAVEPGTFSYSRVVEAASLYRDCRRARADADCKILVSGGDARRNGVPEASVYRDALVGVGIDAADVLSEPRSMNTWQ NAQFTRVALDGYRADRVLLVTSGIHLRRSMLYFAHFGVAAIAVRAEYLQAVTFPLPLAYNFAIADLALHEYLGIARYRLY NALGWNPARTRPGDA
Sequences:
>Translated_255_residues MTLALLTVVALVAALLRFTKRRRASRALFVATVAAFFAIGCGLVPAWLLRALQAPYAARPAIEWGERNAIVMLGLGTEKI AATGAVEPGTFSYSRVVEAASLYRDCRRARADADCKILVSGGDARRNGVPEASVYRDALVGVGIDAADVLSEPRSMNTWQ NAQFTRVALDGYRADRVLLVTSGIHLRRSMLYFAHFGVAAIAVRAEYLQAVTFPLPLAYNFAIADLALHEYLGIARYRLY NALGWNPARTRPGDA >Mature_254_residues TLALLTVVALVAALLRFTKRRRASRALFVATVAAFFAIGCGLVPAWLLRALQAPYAARPAIEWGERNAIVMLGLGTEKIA ATGAVEPGTFSYSRVVEAASLYRDCRRARADADCKILVSGGDARRNGVPEASVYRDALVGVGIDAADVLSEPRSMNTWQN AQFTRVALDGYRADRVLLVTSGIHLRRSMLYFAHFGVAAIAVRAEYLQAVTFPLPLAYNFAIADLALHEYLGIARYRLYN ALGWNPARTRPGDA
Specific function: Unknown
COG id: COG1434
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27746; Mature: 27615
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: PS00211 ABC_TRANSPORTER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLALLTVVALVAALLRFTKRRRASRALFVATVAAFFAIGCGLVPAWLLRALQAPYAARP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC AIEWGERNAIVMLGLGTEKIAATGAVEPGTFSYSRVVEAASLYRDCRRARADADCKILVS CCCCCCCCEEEEEECCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEE GGDARRNGVPEASVYRDALVGVGIDAADVLSEPRSMNTWQNAQFTRVALDGYRADRVLLV CCCCCCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCEEEEEECCCCCCEEEEE TSGIHLRRSMLYFAHFGVAAIAVRAEYLQAVTFPLPLAYNFAIADLALHEYLGIARYRLY ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH NALGWNPARTRPGDA HHCCCCCCCCCCCCC >Mature Secondary Structure TLALLTVVALVAALLRFTKRRRASRALFVATVAAFFAIGCGLVPAWLLRALQAPYAARP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC AIEWGERNAIVMLGLGTEKIAATGAVEPGTFSYSRVVEAASLYRDCRRARADADCKILVS CCCCCCCCEEEEEECCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEE GGDARRNGVPEASVYRDALVGVGIDAADVLSEPRSMNTWQNAQFTRVALDGYRADRVLLV CCCCCCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCEEEEEECCCCCCEEEEE TSGIHLRRSMLYFAHFGVAAIAVRAEYLQAVTFPLPLAYNFAIADLALHEYLGIARYRLY ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH NALGWNPARTRPGDA HHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA