Click here to switch to the map view.

The map label for this gene is pilS

Identifier: 53722618

GI number: 53722618

Start: 2169748

End: 2170302

Strand: Reverse

Name: pilS

Synonym: BPSS1595

Alternate gene names: NA

Gene position: 2170302-2169748 (Counterclockwise)

Preceding gene: 53722619

Following gene: 53722617

Centisome position: 68.4

GC content: 65.77

Gene sequence:

>555_bases
ATGAAACCACTCGCCGCCCATCCCGCCTATCGACACGAGCCGGCGTTCTGCCGGCGCCACCGCCGCGAGCGCGGCGCGTC
GCTGCTCGAGAGCATCGCGTATCTCGGCGTCGCGGCGATCGTGATCGTCGGCGCGATCGCGCTGCTCGGCTCGGCGTTCT
CGAGCGCGAACACGAACCGGCTCGCCGAGGAGCTGAACGCGATCCAGACGGGGACGAAAAAGCTGTATATGGGGCAGGTG
AACAACTATGGGGACGCCGACCTGAACGCGAATCTCATCGCGGCGCGGGTGTTTCCGAGCACGCTGCCCACCGGCAACAA
CAACACGGTATCGAATGCTTGGGGAGGCAACGTCACGGTGACGGGGGCCGGCCGGACCTTCACGGTCCAGTACACGAACG
TTCCGCGCGACGTCTGCATCAATACGCTGACCGCCGGCGGCAACTGGCAGACCGTTGCGATCGGCGGAAATGCGCCGATC
AACTACCCGGTTTCGCCCACCAATGCGACCGCGAACTGCGCGGACGCCGCCACGATCGTCTGGACGTCGAACTGA

Upstream 100 bases:

>100_bases
GCTGGCTCGTGACGGGCTTCTTCGGCATCCAGCAGGAAATCGCCGCAATGACGCGCGCGATGCATTGACGTCGCGCATTT
TCAATTCAGGAGAAACCAGC

Downstream 100 bases:

>100_bases
CGCCGCCCGAATCGTTTTCCACCGTTCGCACCGCCGCACATGTACGCGTTAGCCGCCGCACTGGCCTTCGCCTCGCTCGC
CGCCGTCTACGCGGCGCTGC

Product: major pilin subunit

Products: NA

Alternate protein names: PilS Domain Protein; PilS Domain-Containing Protein; Type IV Pilus Assemby PilS Protein

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MKPLAAHPAYRHEPAFCRRHRRERGASLLESIAYLGVAAIVIVGAIALLGSAFSSANTNRLAEELNAIQTGTKKLYMGQV
NNYGDADLNANLIAARVFPSTLPTGNNNTVSNAWGGNVTVTGAGRTFTVQYTNVPRDVCINTLTAGGNWQTVAIGGNAPI
NYPVSPTNATANCADAATIVWTSN

Sequences:

>Translated_184_residues
MKPLAAHPAYRHEPAFCRRHRRERGASLLESIAYLGVAAIVIVGAIALLGSAFSSANTNRLAEELNAIQTGTKKLYMGQV
NNYGDADLNANLIAARVFPSTLPTGNNNTVSNAWGGNVTVTGAGRTFTVQYTNVPRDVCINTLTAGGNWQTVAIGGNAPI
NYPVSPTNATANCADAATIVWTSN
>Mature_184_residues
MKPLAAHPAYRHEPAFCRRHRRERGASLLESIAYLGVAAIVIVGAIALLGSAFSSANTNRLAEELNAIQTGTKKLYMGQV
NNYGDADLNANLIAARVFPSTLPTGNNNTVSNAWGGNVTVTGAGRTFTVQYTNVPRDVCINTLTAGGNWQTVAIGGNAPI
NYPVSPTNATANCADAATIVWTSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19346; Mature: 19346

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPLAAHPAYRHEPAFCRRHRRERGASLLESIAYLGVAAIVIVGAIALLGSAFSSANTNR
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LAEELNAIQTGTKKLYMGQVNNYGDADLNANLIAARVFPSTLPTGNNNTVSNAWGGNVTV
HHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEE
TGAGRTFTVQYTNVPRDVCINTLTAGGNWQTVAIGGNAPINYPVSPTNATANCADAATIV
EECCEEEEEEECCCCHHHHHEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEE
WTSN
EECC
>Mature Secondary Structure
MKPLAAHPAYRHEPAFCRRHRRERGASLLESIAYLGVAAIVIVGAIALLGSAFSSANTNR
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LAEELNAIQTGTKKLYMGQVNNYGDADLNANLIAARVFPSTLPTGNNNTVSNAWGGNVTV
HHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEE
TGAGRTFTVQYTNVPRDVCINTLTAGGNWQTVAIGGNAPINYPVSPTNATANCADAATIV
EECCEEEEEEECCCCHHHHHEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEE
WTSN
EECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA