| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
Click here to switch to the map view.
The map label for this gene is tauC
Identifier: 53722593
GI number: 53722593
Start: 2133908
End: 2134765
Strand: Reverse
Name: tauC
Synonym: BPSS1572
Alternate gene names: 53722593
Gene position: 2134765-2133908 (Counterclockwise)
Preceding gene: 53722594
Following gene: 53722584
Centisome position: 67.28
GC content: 71.45
Gene sequence:
>858_bases TTGACGTTGGCCGCCACTGAACCGAATGCCGATCTCGCGCTGCCGCTGCCGGCAACCCATGCGGCCGCGAGCGCGGCGGC GCGCCGCGCGCCGCGCGTGCATGCGGGCCACGCGGCCGCGCTCGCGACGTGGGTCGCGCTTGCCGCCGGCTGGTGGCTCG CCGCGCGCTTCGAATGGGTATCGGCCGCGCTGCTGCCGGGCCCCGAGGCCGTGCTGCGCAAGCTCGTCGTGCTGAGCACC GAGGGTTTCGACGACGCGACGCTCGGCGAACATCTGCTCGCGAGCGTGTCGCGGATCGCGACGGCGTTCGCACTCGCGAT CGTCACCGCGATCCCGGTCGGCATCCTGGTCGCGACGAACCGGATCGTGCGCGGCGTCGTCGATCCGATCGTCGAGTTTT ACCGGCCGATTCCGCCGCTCGCGTATCTGCCGTTGATGGTCGTCTGGTTCGGGATCGGCGACGCGTCGAAAATCCTGCTG ATCTATCTGACGATGTTCGCACCGCTCGCGATCGCGACCGCCGCGGGCGCGAGCGGCGTATCGGAAAGCCGCCTGCGCGC GGCCGCGTCGCTCGGCGCGACGCGCGTGCAACTGCTGCGCCACGTCGTGCTGCCGAGCGCGCTGCCGGACATCCTGACCG GCGTGCGCATCGCGCTCGGCGCGGGATGGTCGACGCTCGTCGCGGCGGAGCTGATCGCGGCGACGCGCGGGCTCGGCTTC ATGGTGTATTCCGCGTCACGGTTCCTCGTGACGGACGTCGTGATCGCGGGGATCCTCGTGATCGGCGCGATCGCGCTCGC GCTGGAAATCGGCTTGCGCGCGCTGCAGCGGCGATTGACGCCGTGGCGGGCCGATTAG
Upstream 100 bases:
>100_bases ACGCGCACGGCGAACCGGTGCGCTCGATCAAGAGCGATCCGCGCTTCACCGAAATCCATCTCGCGCTCGTCGAGCAGCTG ATGCGCGAAACCGAGGAGGT
Downstream 100 bases:
>100_bases CGCGGCGCGTTTGCGATGCGGTGGGCGTCAGGGGCGCGGGGGGCGGCCGATCGATCGGCGCCGCCGAGATCGCACCGGCG TTGCGCCGGTTCGTGGCGGT
Product: permease component of taurine ABC transporter
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MTLAATEPNADLALPLPATHAAASAAARRAPRVHAGHAAALATWVALAAGWWLAARFEWVSAALLPGPEAVLRKLVVLST EGFDDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGDASKILL IYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIAATRGLGF MVYSASRFLVTDVVIAGILVIGAIALALEIGLRALQRRLTPWRAD
Sequences:
>Translated_285_residues MTLAATEPNADLALPLPATHAAASAAARRAPRVHAGHAAALATWVALAAGWWLAARFEWVSAALLPGPEAVLRKLVVLST EGFDDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGDASKILL IYLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIAATRGLGF MVYSASRFLVTDVVIAGILVIGAIALALEIGLRALQRRLTPWRAD >Mature_284_residues TLAATEPNADLALPLPATHAAASAAARRAPRVHAGHAAALATWVALAAGWWLAARFEWVSAALLPGPEAVLRKLVVLSTE GFDDATLGEHLLASVSRIATAFALAIVTAIPVGILVATNRIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGDASKILLI YLTMFAPLAIATAAGASGVSESRLRAAASLGATRVQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIAATRGLGFM VYSASRFLVTDVVIAGILVIGAIALALEIGLRALQRRLTPWRAD
Specific function: Part of a binding-protein-dependent transport system for taurine. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=236, Percent_Identity=61.4406779661017, Blast_Score=269, Evalue=1e-73, Organism=Escherichia coli, GI87081802, Length=239, Percent_Identity=33.4728033472803, Blast_Score=129, Evalue=2e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 29715; Mature: 29584
Theoretical pI: Translated: 10.58; Mature: 10.58
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLAATEPNADLALPLPATHAAASAAARRAPRVHAGHAAALATWVALAAGWWLAARFEWV CCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SAALLPGPEAVLRKLVVLSTEGFDDATLGEHLLASVSRIATAFALAIVTAIPVGILVATN HHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGDASKILLIYLTMFAPLAIATAAGASGV HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC SESRLRAAASLGATRVQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIAATRGLGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHH MVYSASRFLVTDVVIAGILVIGAIALALEIGLRALQRRLTPWRAD EEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TLAATEPNADLALPLPATHAAASAAARRAPRVHAGHAAALATWVALAAGWWLAARFEWV CCCCCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SAALLPGPEAVLRKLVVLSTEGFDDATLGEHLLASVSRIATAFALAIVTAIPVGILVATN HHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RIVRGVVDPIVEFYRPIPPLAYLPLMVVWFGIGDASKILLIYLTMFAPLAIATAAGASGV HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC SESRLRAAASLGATRVQLLRHVVLPSALPDILTGVRIALGAGWSTLVAAELIAATRGLGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHH MVYSASRFLVTDVVIAGILVIGAIALALEIGLRALQRRLTPWRAD EEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8808933; 9278503 [H]