| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53722560
Identifier: 53722560
GI number: 53722560
Start: 2092039
End: 2093316
Strand: Reverse
Name: 53722560
Synonym: BPSS1539
Alternate gene names: NA
Gene position: 2093316-2092039 (Counterclockwise)
Preceding gene: 53722561
Following gene: 53722559
Centisome position: 65.97
GC content: 77.78
Gene sequence:
>1278_bases ATGGGTTCAACCATCAGCAATAGCGCGCCGATCGCGCCGATCGTCTCGGGCGTCGAGCCCGCGCAGCAGCCGGACGCGGG GCGGACGTCCGATCTGCAGCGCGCGTATCACGAGCAATGCCGCGCGGCGCTCGGCAAGCGCGACGACGGACGCGACTGCG ACGACACCGAAGCGCAGCGCGCCCACGCGAGGAAAAAGACGAAGCGCAACGGCGAGCCGCCGGGCGCGGCGGGCGGGATG CCCGTGCCGCATGCGGCGCGGGACCGGGCGTTCGCGTTGCGGTTCGGCGGCGCGCGGCTCGGCGAAGCGCGAAGCGGCGC GAACGCGCGGGATGCGCGCGTCGGAGCGGGCGCCGAAGCGGGTATCGAAGCGGGTATCGAAGCGGGCGTGGGGGTGGGCA CCGACGCGCATGCGGCGGGCGGCGCGCGCACGCGCGGCGAAATCGCGGCGCGCGGCGGCGCGACGATGCGCGGCCACGCG CCGGCCTCCGGCGCGGTTCGCGCGACTAGCGAACGCGCACCCGCCGCTGCGACGGCCGACGCGCACGCGCCGCAAGCGGC GGCCGAGAGCGCGCCGCCGTCCGTGCCGATGCCGGCGGCGCACGCGGCGCCGCGCACGTCGGGCGGCAGCGCGCGCGATA TCGCAGCCGCCGCCGCGCGGATTTGCGCGACGGCGGCGGACCCGGCGGCGGGCGTCGTCGCGTCGCGCTCGCCGGCGTTG CCCGCCGCGCGCGGGCCGGCCTCGGCGACGGCCGCCGCATCGGCCATGTCGGCCATGTCGTCGACACGACGCCCGACGGC CGCCGCTTCGCCGGGCGCTGCGCGCGAACGCGTCGACGGCGACGATTCGAACCGTGCGGGCGACGCGTCGCTCGCCGGCT TGCCGCGCGGCGTTCAACCGCAGGCGTCGCTGCGCGCCGCCGAGCCCGCGGCGCGCGCGCACGACCCGTCGCGCGCCGCA CGCCAACGCGCGCAGGCCGGCGCGGCGCAGGCGGACGCGCGCGATGTCCGGGAAACGCAAGGCACCCAGGTGCGCTACAG CTTCAATTCGTGGGACGGGCGGCCCGCGGTCGAGCTGCGCTTCGATGCGGGCGGCGCGCCGCGCGTCGTCAACGCGCAGC CGAGCCACGACCGCGTGCAGCGCGCGATGGAGCACGGCGCCGATCGGCTGTCGCCCGGATGGACGGTCGAATTCGATCGG TCGCGTGCGGATGATGACAGCGGCGGCCGCTCGCCGTGGCGGCGCGCGCGGCAGGAGCCGGAGGCGGATGAGCGATGA
Upstream 100 bases:
>100_bases CGGCGCAACGCGCATCGCGACTGGCTCGCGCGGCGCAGGATCGAAACCGAGCGGCGGCGCGAATCGGCCGCCGAAGCGGA CATCACGGAAGGAGCAGGTC
Downstream 100 bases:
>100_bases GCGCGCGCTATACGTTGTTCAGGCGCGTCGCGCCCGCGGAATTGCCGCTGTACCGCCGTGCGCGGGCGCTGCGCGCGGCG GGCGAGCACGCCGCGCTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 425; Mature: 424
Protein sequence:
>425_residues MGSTISNSAPIAPIVSGVEPAQQPDAGRTSDLQRAYHEQCRAALGKRDDGRDCDDTEAQRAHARKKTKRNGEPPGAAGGM PVPHAARDRAFALRFGGARLGEARSGANARDARVGAGAEAGIEAGIEAGVGVGTDAHAAGGARTRGEIAARGGATMRGHA PASGAVRATSERAPAAATADAHAPQAAAESAPPSVPMPAAHAAPRTSGGSARDIAAAAARICATAADPAAGVVASRSPAL PAARGPASATAAASAMSAMSSTRRPTAAASPGAARERVDGDDSNRAGDASLAGLPRGVQPQASLRAAEPAARAHDPSRAA RQRAQAGAAQADARDVRETQGTQVRYSFNSWDGRPAVELRFDAGGAPRVVNAQPSHDRVQRAMEHGADRLSPGWTVEFDR SRADDDSGGRSPWRRARQEPEADER
Sequences:
>Translated_425_residues MGSTISNSAPIAPIVSGVEPAQQPDAGRTSDLQRAYHEQCRAALGKRDDGRDCDDTEAQRAHARKKTKRNGEPPGAAGGM PVPHAARDRAFALRFGGARLGEARSGANARDARVGAGAEAGIEAGIEAGVGVGTDAHAAGGARTRGEIAARGGATMRGHA PASGAVRATSERAPAAATADAHAPQAAAESAPPSVPMPAAHAAPRTSGGSARDIAAAAARICATAADPAAGVVASRSPAL PAARGPASATAAASAMSAMSSTRRPTAAASPGAARERVDGDDSNRAGDASLAGLPRGVQPQASLRAAEPAARAHDPSRAA RQRAQAGAAQADARDVRETQGTQVRYSFNSWDGRPAVELRFDAGGAPRVVNAQPSHDRVQRAMEHGADRLSPGWTVEFDR SRADDDSGGRSPWRRARQEPEADER >Mature_424_residues GSTISNSAPIAPIVSGVEPAQQPDAGRTSDLQRAYHEQCRAALGKRDDGRDCDDTEAQRAHARKKTKRNGEPPGAAGGMP VPHAARDRAFALRFGGARLGEARSGANARDARVGAGAEAGIEAGIEAGVGVGTDAHAAGGARTRGEIAARGGATMRGHAP ASGAVRATSERAPAAATADAHAPQAAAESAPPSVPMPAAHAAPRTSGGSARDIAAAAARICATAADPAAGVVASRSPALP AARGPASATAAASAMSAMSSTRRPTAAASPGAARERVDGDDSNRAGDASLAGLPRGVQPQASLRAAEPAARAHDPSRAAR QRAQAGAAQADARDVRETQGTQVRYSFNSWDGRPAVELRFDAGGAPRVVNAQPSHDRVQRAMEHGADRLSPGWTVEFDRS RADDDSGGRSPWRRARQEPEADER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43160; Mature: 43029
Theoretical pI: Translated: 10.66; Mature: 10.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSTISNSAPIAPIVSGVEPAQQPDAGRTSDLQRAYHEQCRAALGKRDDGRDCDDTEAQR CCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH AHARKKTKRNGEPPGAAGGMPVPHAARDRAFALRFGGARLGEARSGANARDARVGAGAEA HHHHHHHHCCCCCCCCCCCCCCCCHHCCCEEEEEECCCHHCHHHCCCCCCHHHCCCCCHH GIEAGIEAGVGVGTDAHAAGGARTRGEIAARGGATMRGHAPASGAVRATSERAPAAATAD HHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCEECCCCCCCCEEECCCCCCCCCCCC AHAPQAAAESAPPSVPMPAAHAAPRTSGGSARDIAAAAARICATAADPAAGVVASRSPAL CCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCC PAARGPASATAAASAMSAMSSTRRPTAAASPGAARERVDGDDSNRAGDASLAGLPRGVQP CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHCCCCCCCC QASLRAAEPAARAHDPSRAARQRAQAGAAQADARDVRETQGTQVRYSFNSWDGRPAVELR HHHHHHCCCHHHCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEE FDAGGAPRVVNAQPSHDRVQRAMEHGADRLSPGWTVEFDRSRADDDSGGRSPWRRARQEP ECCCCCCCEECCCCCHHHHHHHHHHCHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHCCC EADER CCCCC >Mature Secondary Structure GSTISNSAPIAPIVSGVEPAQQPDAGRTSDLQRAYHEQCRAALGKRDDGRDCDDTEAQR CCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH AHARKKTKRNGEPPGAAGGMPVPHAARDRAFALRFGGARLGEARSGANARDARVGAGAEA HHHHHHHHCCCCCCCCCCCCCCCCHHCCCEEEEEECCCHHCHHHCCCCCCHHHCCCCCHH GIEAGIEAGVGVGTDAHAAGGARTRGEIAARGGATMRGHAPASGAVRATSERAPAAATAD HHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCEECCCCCCCCEEECCCCCCCCCCCC AHAPQAAAESAPPSVPMPAAHAAPRTSGGSARDIAAAAARICATAADPAAGVVASRSPAL CCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCC PAARGPASATAAASAMSAMSSTRRPTAAASPGAARERVDGDDSNRAGDASLAGLPRGVQP CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHCCCCCCCC QASLRAAEPAARAHDPSRAARQRAQAGAAQADARDVRETQGTQVRYSFNSWDGRPAVELR HHHHHHCCCHHHCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEE FDAGGAPRVVNAQPSHDRVQRAMEHGADRLSPGWTVEFDRSRADDDSGGRSPWRRARQEP ECCCCCCCEECCCCCHHHHHHHHHHCHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHCCC EADER CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA