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The map label for this gene is bsaY

Identifier: 53722556

GI number: 53722556

Start: 2089321

End: 2090076

Strand: Reverse

Name: bsaY

Synonym: BPSS1535

Alternate gene names: 53722556

Gene position: 2090076-2089321 (Counterclockwise)

Preceding gene: 53722557

Following gene: 53722555

Centisome position: 65.87

GC content: 68.25

Gene sequence:

>756_bases
ATGGATGTCTTGATGCAAGCGTTCTACCGGCACGCCGGCGCGATCGCGATCGCGTACGCGCGCGTCGCGCCGGTGTTCTA
TCTGCTGCCGTTCCTGAACGACCGGACGATCGTCAACGGCATCGTGAAGAACACGATCGTGTTCGCGATCATCCTCGGGC
TGTGGCCGAGCTTCGCGCATCCGCCGCTGCAAGGCGGCGCGCTCGCCGGCGTCGCGCTGACGGAGGCGGCTGCGGGCGTC
GTGCTCGGCGTCGCGCTGTCGCTGCCGTTCTGGGTCGCGACGGCGTTGGGCGAGCTGATCGACAACCAGCGCGGCGCGAC
GATCAGCGATTCGATCGACCCGGCGACGGGCGTCGAAGCGTCGGCGCTCGCGCCGTTCGTGAGCCTGTTCTATGCGGCCG
CGTTCCTGCAGCAGGGCGGCATGCTGACGATCGTCGGCGCGCTCGAGGCGAGCTACGCGACGGTGCCCGCCGGCGCGCTG
TTCTCGGTCGATCTGCCGCGCATCGGCGCGCTGTTGACCGATCTCGTCGCGCACGGGCTCGCGCTCGCCGCGCCCGTGCT
GATCGTGATGTTCGTCACCGATGCGCTGCTCGGGCTGTTCTCGCGCTTCTGCCCGCAGGTCAACGCGTTCTCGCTGTCGC
TGACGGTCAAGAGCATCGTCGCGTTCGCCGTGTTCCACCTGTACTTCGTATACGCGGCGCCGCACGAGCTGACGGCGCTG
CTGCGCGTGCATCCTTTCAGCAGCCTGGTGAAGTGA

Upstream 100 bases:

>100_bases
CTCCGGCTGGTTCGGCGGCAAGCTGCTCGCGTTCGCGACCGAGATGCTGTCGATCGGGCTGCGCTGAGCCGCTTCACGTC
ACGTCATGCCGAGCGACACG

Downstream 100 bases:

>100_bases
GCGATGGCCGAGAAAACCGAGAAGCCGACCGCGAAGAAGCTGCGCGACGCGGCGAAGAAGGGGCAGACGTTCAAGGCGCG
GGACATCGTCGCGCTCATCG

Product: surface presentation of antigens protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MDVLMQAFYRHAGAIAIAYARVAPVFYLLPFLNDRTIVNGIVKNTIVFAIILGLWPSFAHPPLQGGALAGVALTEAAAGV
VLGVALSLPFWVATALGELIDNQRGATISDSIDPATGVEASALAPFVSLFYAAAFLQQGGMLTIVGALEASYATVPAGAL
FSVDLPRIGALLTDLVAHGLALAAPVLIVMFVTDALLGLFSRFCPQVNAFSLSLTVKSIVAFAVFHLYFVYAAPHELTAL
LRVHPFSSLVK

Sequences:

>Translated_251_residues
MDVLMQAFYRHAGAIAIAYARVAPVFYLLPFLNDRTIVNGIVKNTIVFAIILGLWPSFAHPPLQGGALAGVALTEAAAGV
VLGVALSLPFWVATALGELIDNQRGATISDSIDPATGVEASALAPFVSLFYAAAFLQQGGMLTIVGALEASYATVPAGAL
FSVDLPRIGALLTDLVAHGLALAAPVLIVMFVTDALLGLFSRFCPQVNAFSLSLTVKSIVAFAVFHLYFVYAAPHELTAL
LRVHPFSSLVK
>Mature_251_residues
MDVLMQAFYRHAGAIAIAYARVAPVFYLLPFLNDRTIVNGIVKNTIVFAIILGLWPSFAHPPLQGGALAGVALTEAAAGV
VLGVALSLPFWVATALGELIDNQRGATISDSIDPATGVEASALAPFVSLFYAAAFLQQGGMLTIVGALEASYATVPAGAL
FSVDLPRIGALLTDLVAHGLALAAPVLIVMFVTDALLGLFSRFCPQVNAFSLSLTVKSIVAFAVFHLYFVYAAPHELTAL
LRVHPFSSLVK

Specific function: Involved in a secretory pathway responsible for the surface presentation of determinants needed for the entry of Salmonella species into mammalian cells [H]

COG id: COG4791

COG function: function code U; Type III secretory pathway, component EscT

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliR/mopE/spaR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002010
- InterPro:   IPR006304 [H]

Pfam domain/function: PF01311 Bac_export_1 [H]

EC number: NA

Molecular weight: Translated: 26339; Mature: 26339

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVLMQAFYRHAGAIAIAYARVAPVFYLLPFLNDRTIVNGIVKNTIVFAIILGLWPSFAH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
PPLQGGALAGVALTEAAAGVVLGVALSLPFWVATALGELIDNQRGATISDSIDPATGVEA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH
SALAPFVSLFYAAAFLQQGGMLTIVGALEASYATVPAGALFSVDLPRIGALLTDLVAHGL
HHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHH
ALAAPVLIVMFVTDALLGLFSRFCPQVNAFSLSLTVKSIVAFAVFHLYFVYAAPHELTAL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LRVHPFSSLVK
HHHCCHHHHCC
>Mature Secondary Structure
MDVLMQAFYRHAGAIAIAYARVAPVFYLLPFLNDRTIVNGIVKNTIVFAIILGLWPSFAH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
PPLQGGALAGVALTEAAAGVVLGVALSLPFWVATALGELIDNQRGATISDSIDPATGVEA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH
SALAPFVSLFYAAAFLQQGGMLTIVGALEASYATVPAGALFSVDLPRIGALLTDLVAHGL
HHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHH
ALAAPVLIVMFVTDALLGLFSRFCPQVNAFSLSLTVKSIVAFAVFHLYFVYAAPHELTAL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LRVHPFSSLVK
HHHCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8404849; 11677609 [H]