| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
Click here to switch to the map view.
The map label for this gene is 53722549
Identifier: 53722549
GI number: 53722549
Start: 2080097
End: 2082739
Strand: Reverse
Name: 53722549
Synonym: BPSS1528
Alternate gene names: NA
Gene position: 2082739-2080097 (Counterclockwise)
Preceding gene: 53722550
Following gene: 53722548
Centisome position: 65.64
GC content: 75.18
Gene sequence:
>2643_bases ATGCCGCCGTCCATTCACCGAACTTCGTCCATCAACAGCACGCCGGCCGTGACCGCGGCCGGCGCACGGCGCGCGTCCGG GCCCGGCGGTGTTCTGTCGGCCGACGTCGCGCGCGTGGCGAGCGCGCGCCGGCACACGATGCCGGAAATCGGCGCGCGGC GCGGCGTCGACGGCGATCGCGCCGCGCCCGCGCCGCGCGAATCGTTCCGGCGGCGGCTCGAGACCGTATCGTCGCGCGCG CCGACGCCGCCGCCCGAGGCGGACTCGCGCGCCGCGAATGCGCGCACGACGGGCGCCGCGGATGGGGCGGGGGCGACGGG CGCGGCGGCCGGCCCATCGCACGGCGCGACGTCGCTCGATGCGGCGCGCGCGTATCTGGCCGAACTCGCCGGCGACCGTG GCGGCGCGCTGACGACGCTCGTCGCGCAACTGAACGGCCATGATCGCCGCGCGCTCGACCATCTCGCGCTGACGGTGCAT GCGCTGCACCTGAGCGTCGACGACGCGAGCCACGCGAAGACGTTCGCCGGCATCGGCGACGCGCTCGCGTCGTTTCTCGC GGCCGCCGCGCGCGCGAACGCGAAACCCGGCTCGACGCCGCGCGATCTGTGCGTCGAGGGCAACAAGGGTTACCGCAAGC TTTGCGAGTGCGTCGGCGCGTTGCTGAGGTCCGACGGCATCGCGAACGCGCTGTTCGGCCGCGCGCGCGAGCGCGGCGAC GCGGCGGCGGACACGCTCGTGTCCGAGCGTCTCGGCGGCCGGATGGACGGGCACGTGCGCACGAACGGGATGGTGAACCG GCACGGCGGCGACGCGCAGCGCCGGATGGCGGACGCCGCGCAGCGCTTCGCGCTCGGCGCGCGCCACGCGACGAATCTCG TCGACATGGTCGGCACCGCGCTGGAGCTGCTCGGGCGCACCGATCAGTTGCTCAACGACGTCTCGCTGAAGCGGCCGGCC GCCGAGCCGGGCGGCCCGCGCGCGCCGGGCGGCGGCCGCGCCGCGCCCGCCGGGCCCGCGTCGGGCGCGGCGCAGCAGCC GGCCGCGCCGGTCGTCGTCAACAATCATAACGAGAACAACGTGAACGTGAATCTCGACGGGCTGGAGAGGCTCGTCGGCG ATCTCGGCAAGATGATGGGCGCGCTGCTCGAGCGCATGGGCGCATACGATCCGTCGCACACGCGGCCCGCGGCGCCCGAT GCGAACGGCCCCGCGCCTGTGCGCACGGGCGGGCACACGACCGTCGTGAAATCGCCGGTGTCGGTCGCGCGGACCTCGAA CAACGGCGCGCCGGGCTCGCCGGCCGCGGACGGCACGCGCGGCGATGCGCCGATGCCGCCGACAACGCCGGCACTGCCAG CAACGCCGGCAACGCCGACAACGCCGCCGGCGGGCGGGCCGTCCATGGATGAGCGCACGCCGGCGACCAACACGCTCGAG CGGGGCGCCGGAAACGGCGGCGCGTCGCCGACGGGCGCGTGGCGGCGCGGCGACGACGGCGGATGGCGGATGGCGCGCGG CAATCCGGTCGTCAGGACCACCGAAGGTGCGACGCGGATCGATCCGTTCAGCCGCGTCGGCGCGCGTGCGGCATCCGGCG CGGGCGCCGCGCGCGCGTGGCGCGATGCGGCGGCTGACGCCACGCAACGAAGCCTCGCCAGTGGAACGAGCGGCGGCGCG GCTGACGCAATCGCGCCGCGCGCCGGCGCCGGCGCGGCGGCGGGCGGCGATGCCGCTCGCGTGGCGCGGCGCATGCCGGA CGTGCGCGCGGGCGGCCTGGAACGCGACGCGCCGGGTGAGCGAGCCGCGGGGCCGAACGGCTCGAATGGGAGCGCAGTCG GGCAGCCGATCGCGGGGCACGCGCCGGCGGGCGGCCCGGATGCCGCCGATTTCTCAGATGCGTCCGGCACCGGCGGAACG GGCGCGCGCGCGCCGGGTATACCACCGGCCACGGGCTCGTGGTCCCGCGATCCGGCGAGCGGCAGATGGCTTCGCGCGGG CGGCGGTGTGCCGCTGCGCTCGACGGAAGGCTTCGGCCGGATCGATCCGTTTGCCGGCGTGCAACGCAATGCGTCCGCAA CGGGCGCGTCGGCCGTGTCTTCGCCTTCGTTTGCGTCGGCTTCGATGTCGGTTGGCTCGACGGGCGCGTTGCCTGCCGGG TCGTCCATTGCGTCGCCCGATACGTCGGGCATCGCACCGGCCGTCGCATCGGGTGGTGCGTTGGACGTCGCATCGAACGT CGCATCGAACGTCACATCGAACGTCACATCGAACGTCGCATCGGGCGTCACATCGGGCGTCACATCGGGCGTCGCGCCCG ACGGCACCGCCTGGACGCGTCCGTCCGCGCTCGCGCCGCGCAACATCGATCCGCGCCGGATGAACCGTGCGCAGCTGGAG CGAGCGGGCCTTTATCCGCTCGTCGACGATGCTTTGCCACCGTCGTCGCAGTCCGCGCCGGCCGATGCGGGTGATGCGGG TGATGCGGCCGCCCGGCGCGCATCGCGGCCCGACACCGGTGCGCCGCAGCCGGGCGCGGCGAAGACGTTCCCGAGCGTCG CGCCGGCCCACCGAATCGTGACGACCGAAGGCGCGGCGCGCGTCGGCTGGAACGATTCGATCGCCAACGGCACGAAGCGA TGA
Upstream 100 bases:
>100_bases CGAGGGGCCGCGCCCACGCCGCCGCGCATCGCCGCGGCGATGCGCGCGGGCGCGGCCCTTGCCCCGATCCGAAGCAACCG ACAAGAGGAAAAGATTCGCC
Downstream 100 bases:
>100_bases CGGCCGGCCCGCATCTGAGCGACGCCGCCGCGCTCGCGGCGGCCAAGACGCTGCTGGCCGGCATGCTCGGCGTGCCGGAA GCGCAGATCGCGCCGCCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 880; Mature: 879
Protein sequence:
>880_residues MPPSIHRTSSINSTPAVTAAGARRASGPGGVLSADVARVASARRHTMPEIGARRGVDGDRAAPAPRESFRRRLETVSSRA PTPPPEADSRAANARTTGAADGAGATGAAAGPSHGATSLDAARAYLAELAGDRGGALTTLVAQLNGHDRRALDHLALTVH ALHLSVDDASHAKTFAGIGDALASFLAAAARANAKPGSTPRDLCVEGNKGYRKLCECVGALLRSDGIANALFGRARERGD AAADTLVSERLGGRMDGHVRTNGMVNRHGGDAQRRMADAAQRFALGARHATNLVDMVGTALELLGRTDQLLNDVSLKRPA AEPGGPRAPGGGRAAPAGPASGAAQQPAAPVVVNNHNENNVNVNLDGLERLVGDLGKMMGALLERMGAYDPSHTRPAAPD ANGPAPVRTGGHTTVVKSPVSVARTSNNGAPGSPAADGTRGDAPMPPTTPALPATPATPTTPPAGGPSMDERTPATNTLE RGAGNGGASPTGAWRRGDDGGWRMARGNPVVRTTEGATRIDPFSRVGARAASGAGAARAWRDAAADATQRSLASGTSGGA ADAIAPRAGAGAAAGGDAARVARRMPDVRAGGLERDAPGERAAGPNGSNGSAVGQPIAGHAPAGGPDAADFSDASGTGGT GARAPGIPPATGSWSRDPASGRWLRAGGGVPLRSTEGFGRIDPFAGVQRNASATGASAVSSPSFASASMSVGSTGALPAG SSIASPDTSGIAPAVASGGALDVASNVASNVTSNVTSNVASGVTSGVTSGVAPDGTAWTRPSALAPRNIDPRRMNRAQLE RAGLYPLVDDALPPSSQSAPADAGDAGDAAARRASRPDTGAPQPGAAKTFPSVAPAHRIVTTEGAARVGWNDSIANGTKR
Sequences:
>Translated_880_residues MPPSIHRTSSINSTPAVTAAGARRASGPGGVLSADVARVASARRHTMPEIGARRGVDGDRAAPAPRESFRRRLETVSSRA PTPPPEADSRAANARTTGAADGAGATGAAAGPSHGATSLDAARAYLAELAGDRGGALTTLVAQLNGHDRRALDHLALTVH ALHLSVDDASHAKTFAGIGDALASFLAAAARANAKPGSTPRDLCVEGNKGYRKLCECVGALLRSDGIANALFGRARERGD AAADTLVSERLGGRMDGHVRTNGMVNRHGGDAQRRMADAAQRFALGARHATNLVDMVGTALELLGRTDQLLNDVSLKRPA AEPGGPRAPGGGRAAPAGPASGAAQQPAAPVVVNNHNENNVNVNLDGLERLVGDLGKMMGALLERMGAYDPSHTRPAAPD ANGPAPVRTGGHTTVVKSPVSVARTSNNGAPGSPAADGTRGDAPMPPTTPALPATPATPTTPPAGGPSMDERTPATNTLE RGAGNGGASPTGAWRRGDDGGWRMARGNPVVRTTEGATRIDPFSRVGARAASGAGAARAWRDAAADATQRSLASGTSGGA ADAIAPRAGAGAAAGGDAARVARRMPDVRAGGLERDAPGERAAGPNGSNGSAVGQPIAGHAPAGGPDAADFSDASGTGGT GARAPGIPPATGSWSRDPASGRWLRAGGGVPLRSTEGFGRIDPFAGVQRNASATGASAVSSPSFASASMSVGSTGALPAG SSIASPDTSGIAPAVASGGALDVASNVASNVTSNVTSNVASGVTSGVTSGVAPDGTAWTRPSALAPRNIDPRRMNRAQLE RAGLYPLVDDALPPSSQSAPADAGDAGDAAARRASRPDTGAPQPGAAKTFPSVAPAHRIVTTEGAARVGWNDSIANGTKR >Mature_879_residues PPSIHRTSSINSTPAVTAAGARRASGPGGVLSADVARVASARRHTMPEIGARRGVDGDRAAPAPRESFRRRLETVSSRAP TPPPEADSRAANARTTGAADGAGATGAAAGPSHGATSLDAARAYLAELAGDRGGALTTLVAQLNGHDRRALDHLALTVHA LHLSVDDASHAKTFAGIGDALASFLAAAARANAKPGSTPRDLCVEGNKGYRKLCECVGALLRSDGIANALFGRARERGDA AADTLVSERLGGRMDGHVRTNGMVNRHGGDAQRRMADAAQRFALGARHATNLVDMVGTALELLGRTDQLLNDVSLKRPAA EPGGPRAPGGGRAAPAGPASGAAQQPAAPVVVNNHNENNVNVNLDGLERLVGDLGKMMGALLERMGAYDPSHTRPAAPDA NGPAPVRTGGHTTVVKSPVSVARTSNNGAPGSPAADGTRGDAPMPPTTPALPATPATPTTPPAGGPSMDERTPATNTLER GAGNGGASPTGAWRRGDDGGWRMARGNPVVRTTEGATRIDPFSRVGARAASGAGAARAWRDAAADATQRSLASGTSGGAA DAIAPRAGAGAAAGGDAARVARRMPDVRAGGLERDAPGERAAGPNGSNGSAVGQPIAGHAPAGGPDAADFSDASGTGGTG ARAPGIPPATGSWSRDPASGRWLRAGGGVPLRSTEGFGRIDPFAGVQRNASATGASAVSSPSFASASMSVGSTGALPAGS SIASPDTSGIAPAVASGGALDVASNVASNVTSNVTSNVASGVTSGVTSGVAPDGTAWTRPSALAPRNIDPRRMNRAQLER AGLYPLVDDALPPSSQSAPADAGDAGDAAARRASRPDTGAPQPGAAKTFPSVAPAHRIVTTEGAARVGWNDSIANGTKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 87369; Mature: 87238
Theoretical pI: Translated: 11.11; Mature: 11.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPSIHRTSSINSTPAVTAAGARRASGPGGVLSADVARVASARRHTMPEIGARRGVDGDR CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCC AAPAPRESFRRRLETVSSRAPTPPPEADSRAANARTTGAADGAGATGAAAGPSHGATSLD CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH AARAYLAELAGDRGGALTTLVAQLNGHDRRALDHLALTVHALHLSVDDASHAKTFAGIGD HHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHH ALASFLAAAARANAKPGSTPRDLCVEGNKGYRKLCECVGALLRSDGIANALFGRARERGD HHHHHHHHHHHCCCCCCCCHHHHEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH AAADTLVSERLGGRMDGHVRTNGMVNRHGGDAQRRMADAAQRFALGARHATNLVDMVGTA HHHHHHHHHHHCCCCCCEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LELLGRTDQLLNDVSLKRPAAEPGGPRAPGGGRAAPAGPASGAAQQPAAPVVVNNHNENN HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC VNVNLDGLERLVGDLGKMMGALLERMGAYDPSHTRPAAPDANGPAPVRTGGHTTVVKSPV EEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCH SVARTSNNGAPGSPAADGTRGDAPMPPTTPALPATPATPTTPPAGGPSMDERTPATNTLE HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH RGAGNGGASPTGAWRRGDDGGWRMARGNPVVRTTEGATRIDPFSRVGARAASGAGAARAW HCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCCCCCCHHHHHHHHHHCCCCHHHHH RDAAADATQRSLASGTSGGAADAIAPRAGAGAAAGGDAARVARRMPDVRAGGLERDAPGE HHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC RAAGPNGSNGSAVGQPIAGHAPAGGPDAADFSDASGTGGTGARAPGIPPATGSWSRDPAS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GRWLRAGGGVPLRSTEGFGRIDPFAGVQRNASATGASAVSSPSFASASMSVGSTGALPAG CCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHCCCCCCCCCCCC SSIASPDTSGIAPAVASGGALDVASNVASNVTSNVTSNVASGVTSGVTSGVAPDGTAWTR CCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC PSALAPRNIDPRRMNRAQLERAGLYPLVDDALPPSSQSAPADAGDAGDAAARRASRPDTG CCCCCCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCC APQPGAAKTFPSVAPAHRIVTTEGAARVGWNDSIANGTKR CCCCCCCCCCCCCCCCCEEEECCCCEECCCCHHCCCCCCC >Mature Secondary Structure PPSIHRTSSINSTPAVTAAGARRASGPGGVLSADVARVASARRHTMPEIGARRGVDGDR CCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCC AAPAPRESFRRRLETVSSRAPTPPPEADSRAANARTTGAADGAGATGAAAGPSHGATSLD CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH AARAYLAELAGDRGGALTTLVAQLNGHDRRALDHLALTVHALHLSVDDASHAKTFAGIGD HHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHH ALASFLAAAARANAKPGSTPRDLCVEGNKGYRKLCECVGALLRSDGIANALFGRARERGD HHHHHHHHHHHCCCCCCCCHHHHEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH AAADTLVSERLGGRMDGHVRTNGMVNRHGGDAQRRMADAAQRFALGARHATNLVDMVGTA HHHHHHHHHHHCCCCCCEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LELLGRTDQLLNDVSLKRPAAEPGGPRAPGGGRAAPAGPASGAAQQPAAPVVVNNHNENN HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC VNVNLDGLERLVGDLGKMMGALLERMGAYDPSHTRPAAPDANGPAPVRTGGHTTVVKSPV EEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCH SVARTSNNGAPGSPAADGTRGDAPMPPTTPALPATPATPTTPPAGGPSMDERTPATNTLE HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH RGAGNGGASPTGAWRRGDDGGWRMARGNPVVRTTEGATRIDPFSRVGARAASGAGAARAW HCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCCCCCCHHHHHHHHHHCCCCHHHHH RDAAADATQRSLASGTSGGAADAIAPRAGAGAAAGGDAARVARRMPDVRAGGLERDAPGE HHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC RAAGPNGSNGSAVGQPIAGHAPAGGPDAADFSDASGTGGTGARAPGIPPATGSWSRDPAS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GRWLRAGGGVPLRSTEGFGRIDPFAGVQRNASATGASAVSSPSFASASMSVGSTGALPAG CCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHCCCCCCCCCCCC SSIASPDTSGIAPAVASGGALDVASNVASNVTSNVTSNVASGVTSGVTSGVAPDGTAWTR CCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC PSALAPRNIDPRRMNRAQLERAGLYPLVDDALPPSSQSAPADAGDAGDAAARRASRPDTG CCCCCCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCC APQPGAAKTFPSVAPAHRIVTTEGAARVGWNDSIANGTKR CCCCCCCCCCCCCCCCCEEEECCCCEECCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA