| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53722467
Identifier: 53722467
GI number: 53722467
Start: 1967536
End: 1968717
Strand: Reverse
Name: 53722467
Synonym: BPSS1444
Alternate gene names: NA
Gene position: 1968717-1967536 (Counterclockwise)
Preceding gene: 53722468
Following gene: 53722453
Centisome position: 62.05
GC content: 63.2
Gene sequence:
>1182_bases GTGCGCTACACTGCGTCATTCCCTTCCCTCCTGCATGCAATGACACCCCCTGTCGATTTGAACGGCCTGCGCATCGGTAT CACGATCGGCCTGCGCGAGCCGAACGAGAGCCTTTGGATCAACGGCATCAAGCAGAACGCGCTGTTTCTCGCGAAGCTGC TGATGAAGTCGTCGCGCGGCTATCGGGTGACGATCGTCAACACGACCGACGTACCGATCACCGACGCGTTGCCGTGGGAC CGCCGAATATTCGATACCCGCTCGTTCGCCGACGTGAAGGATTCGCTCGACGTGCTGATCGAGCTCGGCGGCCAGATCGA CGGCGAGCAGACCGCGTACCTGAAGGCGCGCGGCGTGAAGCTCGTCAGCTACTGCTGCGGCTTCGAGTACATCCATGCGA CGCAATCGATCCTGTTCGGCCGCAGGATGTGGGATACGCTGTTCATCAACCGCGGCTACGACGAGATCTGGGCGATTCCG CAGATCGCGCCGTCGTCGCTGCCGTTCCTGCAATCGTTGCGGCGCAGCCCGGGGCGCGTCGTGCCGTTCGTCTGGGATCC GATGTTCCTCGGCGAGCGCACGCGTCTGTTGCCCGAGCGCGGCGAGTATCGGCCGAGCGGCAAGCGCGCGAAGCGGCTCA CGGTGATGGAGCCGAACCACGACGTCGTCAAGTTCTGCGTGTATCCGATGCTGATCATCGACGAAGCGTACCGGCGCGAG CCGGACGCGATCGCGTTCGCGCACGTGACGAACGCCGAGCGGCTCGCGCACGACAGCCCGGAATTCGTGATGCTGATGAA TTATCTGGAGATCGTCCGCGCGAGCAAGGCGAGCTTCGTCGGCCGTTTCGATACGCCGACGTTCCTCGCCGAGCATACGG ACGTCGTCGTGTCCCACCAGTGGGAGAACCCGCTCAACTACTTCTATTTCGACGTGTGCTGGCAGGGCTATCCGCTCGTT CACAACGCGCATCTCGTGCCGGACATCGGCTACTACTATCCGGACAACGACGTGCAGACGGGCGCGGAAGTGCTGATGCG CGTGCTGCGCGAGCATGACGACGATTGGGAAGGCTATGCGGCGCGGCAGCGCAGCCTGCTGCGCCGCTATACGTCGAAGA ATCCGACGCTCGTCGCCGAATACGACACGCTGCTCGCGAATCTCGTCAACGACCGGCGCTGA
Upstream 100 bases:
>100_bases CGGCGCGCGCGGCGTACGCGGCGTACGTTAACGATATCTGACAGTCCGGCGAAGGGATGTCCGCTAGACTCGGATTCTGG TGCGAGCGGCGGCGCCGCGC
Downstream 100 bases:
>100_bases CGCGCCGCGCGCGTGCGCTTGCGCCGGCGGCGTGGCGCCGCGCGCTCGGTCGGCGGTTGCCGCTCGCGTGCGCGCCCGGC GCGCGCATCGCACCGCACGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MRYTASFPSLLHAMTPPVDLNGLRIGITIGLREPNESLWINGIKQNALFLAKLLMKSSRGYRVTIVNTTDVPITDALPWD RRIFDTRSFADVKDSLDVLIELGGQIDGEQTAYLKARGVKLVSYCCGFEYIHATQSILFGRRMWDTLFINRGYDEIWAIP QIAPSSLPFLQSLRRSPGRVVPFVWDPMFLGERTRLLPERGEYRPSGKRAKRLTVMEPNHDVVKFCVYPMLIIDEAYRRE PDAIAFAHVTNAERLAHDSPEFVMLMNYLEIVRASKASFVGRFDTPTFLAEHTDVVVSHQWENPLNYFYFDVCWQGYPLV HNAHLVPDIGYYYPDNDVQTGAEVLMRVLREHDDDWEGYAARQRSLLRRYTSKNPTLVAEYDTLLANLVNDRR
Sequences:
>Translated_393_residues MRYTASFPSLLHAMTPPVDLNGLRIGITIGLREPNESLWINGIKQNALFLAKLLMKSSRGYRVTIVNTTDVPITDALPWD RRIFDTRSFADVKDSLDVLIELGGQIDGEQTAYLKARGVKLVSYCCGFEYIHATQSILFGRRMWDTLFINRGYDEIWAIP QIAPSSLPFLQSLRRSPGRVVPFVWDPMFLGERTRLLPERGEYRPSGKRAKRLTVMEPNHDVVKFCVYPMLIIDEAYRRE PDAIAFAHVTNAERLAHDSPEFVMLMNYLEIVRASKASFVGRFDTPTFLAEHTDVVVSHQWENPLNYFYFDVCWQGYPLV HNAHLVPDIGYYYPDNDVQTGAEVLMRVLREHDDDWEGYAARQRSLLRRYTSKNPTLVAEYDTLLANLVNDRR >Mature_393_residues MRYTASFPSLLHAMTPPVDLNGLRIGITIGLREPNESLWINGIKQNALFLAKLLMKSSRGYRVTIVNTTDVPITDALPWD RRIFDTRSFADVKDSLDVLIELGGQIDGEQTAYLKARGVKLVSYCCGFEYIHATQSILFGRRMWDTLFINRGYDEIWAIP QIAPSSLPFLQSLRRSPGRVVPFVWDPMFLGERTRLLPERGEYRPSGKRAKRLTVMEPNHDVVKFCVYPMLIIDEAYRRE PDAIAFAHVTNAERLAHDSPEFVMLMNYLEIVRASKASFVGRFDTPTFLAEHTDVVVSHQWENPLNYFYFDVCWQGYPLV HNAHLVPDIGYYYPDNDVQTGAEVLMRVLREHDDDWEGYAARQRSLLRRYTSKNPTLVAEYDTLLANLVNDRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45302; Mature: 45302
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYTASFPSLLHAMTPPVDLNGLRIGITIGLREPNESLWINGIKQNALFLAKLLMKSSRG CCCCCCHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCEEEECCHHHHHHHHHHHHHCCCC YRVTIVNTTDVPITDALPWDRRIFDTRSFADVKDSLDVLIELGGQIDGEQTAYLKARGVK EEEEEEECCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHH LVSYCCGFEYIHATQSILFGRRMWDTLFINRGYDEIWAIPQIAPSSLPFLQSLRRSPGRV HHHHHHCHHHHHHHHHHHHHHHHHHHHEEECCHHHHEECCCCCCCCCHHHHHHHCCCCCE VPFVWDPMFLGERTRLLPERGEYRPSGKRAKRLTVMEPNHDVVKFCVYPMLIIDEAYRRE EEEEECCHHHCCHHHCCCCCCCCCCCCCHHCEEEEECCCHHHHHHHHHHHHHHHHHHCCC PDAIAFAHVTNAERLAHDSPEFVMLMNYLEIVRASKASFVGRFDTPTFLAEHTDVVVSHQ CCCEEEEEECCHHHHHCCCCHHHHHHHHHHHHHHHHHHHEECCCCCHHHHCCCCEEEEEC WENPLNYFYFDVCWQGYPLVHNAHLVPDIGYYYPDNDVQTGAEVLMRVLREHDDDWEGYA CCCCCCEEEEEEEECCCCEEECCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHH ARQRSLLRRYTSKNPTLVAEYDTLLANLVNDRR HHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCC >Mature Secondary Structure MRYTASFPSLLHAMTPPVDLNGLRIGITIGLREPNESLWINGIKQNALFLAKLLMKSSRG CCCCCCHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCEEEECCHHHHHHHHHHHHHCCCC YRVTIVNTTDVPITDALPWDRRIFDTRSFADVKDSLDVLIELGGQIDGEQTAYLKARGVK EEEEEEECCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHH LVSYCCGFEYIHATQSILFGRRMWDTLFINRGYDEIWAIPQIAPSSLPFLQSLRRSPGRV HHHHHHCHHHHHHHHHHHHHHHHHHHHEEECCHHHHEECCCCCCCCCHHHHHHHCCCCCE VPFVWDPMFLGERTRLLPERGEYRPSGKRAKRLTVMEPNHDVVKFCVYPMLIIDEAYRRE EEEEECCHHHCCHHHCCCCCCCCCCCCCHHCEEEEECCCHHHHHHHHHHHHHHHHHHCCC PDAIAFAHVTNAERLAHDSPEFVMLMNYLEIVRASKASFVGRFDTPTFLAEHTDVVVSHQ CCCEEEEEECCHHHHHCCCCHHHHHHHHHHHHHHHHHHHEECCCCCHHHHCCCCEEEEEC WENPLNYFYFDVCWQGYPLVHNAHLVPDIGYYYPDNDVQTGAEVLMRVLREHDDDWEGYA CCCCCCEEEEEEEECCCCEEECCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHH ARQRSLLRRYTSKNPTLVAEYDTLLANLVNDRR HHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA