| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is gsiD [H]
Identifier: 53722328
GI number: 53722328
Start: 1784790
End: 1785698
Strand: Reverse
Name: gsiD [H]
Synonym: BPSS1304
Alternate gene names: 53722328
Gene position: 1785698-1784790 (Counterclockwise)
Preceding gene: 53722329
Following gene: 53722327
Centisome position: 56.28
GC content: 69.97
Gene sequence:
>909_bases ATGAACGCGACTGTTTCCTCCCCCCCTTCCGCACCCGCTTCGGCCGGCGCGCCGGCCGCGATCCGCACGCCGTGGAGCGA GTTCTGGCGCAAGTTCCGCAAGCAGCGCGTCGCGCTCGCGGCGGGGGCGTTCGTGCTGCTGCTCGTCGCCGTGGCGATCG TCGGCCCGCACGTCGTGCCGTACGATCCGGAAAACTATTTCGACTACGACGCGCTGAACGCGGGGCCGTCGGCCGCGCAC TGGTTCGGCGTCGATTCGCTCGGCCGCGACATCTTCAGCCGGATCGTCGCCGGCGCGCGGATCTCGCTCGCCGCGGGCTT CTTCTCGGTCGCGCTCGGCGCGGCGATCGGCACGTTCTTCGGGCTGCTCGCCGGCTACTACGAAGGCTGGTGGGACCGCG CGACGATGCGCGTCGCCGACGTGCTGTTCGCGTTCCCGGGCATCCTGCTCGCGATCGGCGTGGTCGCGATCCTCGGCAAC GGGATGATCAACGTGATCTGCGCGGTCGCGGTGTTCAGCGTGCCCGCGTTCGCGCGGCTCGTGCGCGGCAACACGCTCGC GCTCAAGCAGATGACCTACGTCGAGGCCGCGCGCAGCATCGGCGCGTCCGACCGGACGATCATCATGCGGCACATCCTGC CCGGCACCGTGTCGTCGGTCGTCGTCTACTTCACGATGCGCATCGGCACCTCGATCATCACGGCGGCGAGCCTGTCGTTC CTCGGCCTCGGCGCGCAGCCGCCGACGCCCGAGTGGGGCGCGATGCTCAACGAGGCGCGCGCGGACATGGTCAACGCGCC GCACGTCGCGCTCTTTCCGAGCATCGCGATCTTTCTGACCGTGCTCGCGTTCAACCTGCTCGGCGACGGGCTGCGCGACG CGCTCGATCCGAAACTGGAGCGGCGCTGA
Upstream 100 bases:
>100_bases ATCGTGCTGCTGTTCTCGCTGGAGTTCATCCTGATCAACCTGAGCGTCGACGTGCTGTACGCGGTCATCAACCCGACGAT CCGTTTCAAGTGAGGCGCGC
Downstream 100 bases:
>100_bases TGCGCGCGCGCACATCGGGCCGGGCGGATGCGGCTGAGGCGCTCGACGCCGCCGATGCCGCGCCGCACGTCGGCGCGCTG CCGGCCGGGCCGCTTCGCAG
Product: ABC transport system permease protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MNATVSSPPSAPASAGAPAAIRTPWSEFWRKFRKQRVALAAGAFVLLLVAVAIVGPHVVPYDPENYFDYDALNAGPSAAH WFGVDSLGRDIFSRIVAGARISLAAGFFSVALGAAIGTFFGLLAGYYEGWWDRATMRVADVLFAFPGILLAIGVVAILGN GMINVICAVAVFSVPAFARLVRGNTLALKQMTYVEAARSIGASDRTIIMRHILPGTVSSVVVYFTMRIGTSIITAASLSF LGLGAQPPTPEWGAMLNEARADMVNAPHVALFPSIAIFLTVLAFNLLGDGLRDALDPKLERR
Sequences:
>Translated_302_residues MNATVSSPPSAPASAGAPAAIRTPWSEFWRKFRKQRVALAAGAFVLLLVAVAIVGPHVVPYDPENYFDYDALNAGPSAAH WFGVDSLGRDIFSRIVAGARISLAAGFFSVALGAAIGTFFGLLAGYYEGWWDRATMRVADVLFAFPGILLAIGVVAILGN GMINVICAVAVFSVPAFARLVRGNTLALKQMTYVEAARSIGASDRTIIMRHILPGTVSSVVVYFTMRIGTSIITAASLSF LGLGAQPPTPEWGAMLNEARADMVNAPHVALFPSIAIFLTVLAFNLLGDGLRDALDPKLERR >Mature_302_residues MNATVSSPPSAPASAGAPAAIRTPWSEFWRKFRKQRVALAAGAFVLLLVAVAIVGPHVVPYDPENYFDYDALNAGPSAAH WFGVDSLGRDIFSRIVAGARISLAAGFFSVALGAAIGTFFGLLAGYYEGWWDRATMRVADVLFAFPGILLAIGVVAILGN GMINVICAVAVFSVPAFARLVRGNTLALKQMTYVEAARSIGASDRTIIMRHILPGTVSSVVVYFTMRIGTSIITAASLSF LGLGAQPPTPEWGAMLNEARADMVNAPHVALFPSIAIFLTVLAFNLLGDGLRDALDPKLERR
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1173
COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787054, Length=283, Percent_Identity=76.678445229682, Blast_Score=454, Evalue=1e-129, Organism=Escherichia coli, GI1787760, Length=262, Percent_Identity=39.6946564885496, Blast_Score=205, Evalue=3e-54, Organism=Escherichia coli, GI1789889, Length=241, Percent_Identity=41.49377593361, Blast_Score=181, Evalue=6e-47, Organism=Escherichia coli, GI1789964, Length=285, Percent_Identity=41.4035087719298, Blast_Score=179, Evalue=2e-46, Organism=Escherichia coli, GI1787498, Length=279, Percent_Identity=36.2007168458781, Blast_Score=171, Evalue=4e-44, Organism=Escherichia coli, GI1787549, Length=289, Percent_Identity=34.2560553633218, Blast_Score=128, Evalue=5e-31, Organism=Escherichia coli, GI1788505, Length=225, Percent_Identity=31.5555555555556, Blast_Score=118, Evalue=4e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 32069; Mature: 32069
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNATVSSPPSAPASAGAPAAIRTPWSEFWRKFRKQRVALAAGAFVLLLVAVAIVGPHVVP CCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC YDPENYFDYDALNAGPSAAHWFGVDSLGRDIFSRIVAGARISLAAGFFSVALGAAIGTFF CCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH GLLAGYYEGWWDRATMRVADVLFAFPGILLAIGVVAILGNGMINVICAVAVFSVPAFARL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH VRGNTLALKQMTYVEAARSIGASDRTIIMRHILPGTVSSVVVYFTMRIGTSIITAASLSF HCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH LGLGAQPPTPEWGAMLNEARADMVNAPHVALFPSIAIFLTVLAFNLLGDGLRDALDPKLE HCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHC RR CC >Mature Secondary Structure MNATVSSPPSAPASAGAPAAIRTPWSEFWRKFRKQRVALAAGAFVLLLVAVAIVGPHVVP CCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC YDPENYFDYDALNAGPSAAHWFGVDSLGRDIFSRIVAGARISLAAGFFSVALGAAIGTFF CCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH GLLAGYYEGWWDRATMRVADVLFAFPGILLAIGVVAILGNGMINVICAVAVFSVPAFARL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH VRGNTLALKQMTYVEAARSIGASDRTIIMRHILPGTVSSVVVYFTMRIGTSIITAASLSF HCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH LGLGAQPPTPEWGAMLNEARADMVNAPHVALFPSIAIFLTVLAFNLLGDGLRDALDPKLE HCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHC RR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]