| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53722318
Identifier: 53722318
GI number: 53722318
Start: 1772610
End: 1773047
Strand: Reverse
Name: 53722318
Synonym: BPSS1294
Alternate gene names: NA
Gene position: 1773047-1772610 (Counterclockwise)
Preceding gene: 53722320
Following gene: 53722312
Centisome position: 55.88
GC content: 65.53
Gene sequence:
>438_bases ATGCGCGTGATGGTCATGGTGAAGGCGACGAACGAATCGGAGGCGGGCAAGCTGCCGACGCGGGAACAGTTCGAGGCGAT GGGCCGGTTCAACGAGGCGCTCGTGAAGGCCGGCGTGATTCTCGCGGCCGACGGCCTGCATCCGAGTGCGAAGGGCAAGC GGGTGCGTTTCTCGGGCAGCGCGCGGAGCGTGATCGACGGGCCGTTTGCGCAAACCGGCGAGCTCGTCGCCGGGTTCTGG CTGTGGAAGGTCGCTTCGATGGACGAAGCCGTCGAATGGGTGAAACGATGCCCGAATCCGATGGAGAGCGATTCGGAGAT CGAAATCCGGCCGCTGTACGAGCTCGAGGATTTCGGCGATGCATTCACGCCCGAGCTGCGCGAGCGGGAGGCGCGGCTGC GCGACGAGATCGACGAGCAGGGCAAGAAAGCGCCCTGA
Upstream 100 bases:
>100_bases CCGGCGGCGTTCGGTCGTCGAGATGTCGTGGCCGCCCGATGGCGCCGGGCCCGACCCGGCGGCGGCGCGGCTCGATTCGT CCACTCGAGGAGGCAGCAAA
Downstream 100 bases:
>100_bases CGCCGGGGCGCGGCGCGCGGGGCGGGCCCCGGCGGCGCGGTGGGCGTCGCTTCGTACACGGTCGCTGCTCGGTTGCCGCT CAACCGCCGCTCAACCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: YCII-Related Protein; YCII-Related; DGPF Domain-Containing Protein; YCII-Like Protein; Dgpfaetke; DGPFAETKE Domain-Containing Protein; DGPF Domain-Containing; Dgpfaetke Family Protein; DGPF Protein; Histidine Kinase; DGPF Domain Family; DGPF Domain Protein; Dgpfaetke-Domain Containing Protein; Dgpfaetke Domain; Dgpf Family Protein; Transcription Regulation Protein; Glutathione S-Transferase
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MRVMVMVKATNESEAGKLPTREQFEAMGRFNEALVKAGVILAADGLHPSAKGKRVRFSGSARSVIDGPFAQTGELVAGFW LWKVASMDEAVEWVKRCPNPMESDSEIEIRPLYELEDFGDAFTPELREREARLRDEIDEQGKKAP
Sequences:
>Translated_145_residues MRVMVMVKATNESEAGKLPTREQFEAMGRFNEALVKAGVILAADGLHPSAKGKRVRFSGSARSVIDGPFAQTGELVAGFW LWKVASMDEAVEWVKRCPNPMESDSEIEIRPLYELEDFGDAFTPELREREARLRDEIDEQGKKAP >Mature_145_residues MRVMVMVKATNESEAGKLPTREQFEAMGRFNEALVKAGVILAADGLHPSAKGKRVRFSGSARSVIDGPFAQTGELVAGFW LWKVASMDEAVEWVKRCPNPMESDSEIEIRPLYELEDFGDAFTPELREREARLRDEIDEQGKKAP
Specific function: Unknown
COG id: COG3795
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16228; Mature: 16228
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVMVMVKATNESEAGKLPTREQFEAMGRFNEALVKAGVILAADGLHPSAKGKRVRFSGS CEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCEEEECCC ARSVIDGPFAQTGELVAGFWLWKVASMDEAVEWVKRCPNPMESDSEIEIRPLYELEDFGD CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHCCC AFTPELREREARLRDEIDEQGKKAP CCCHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MRVMVMVKATNESEAGKLPTREQFEAMGRFNEALVKAGVILAADGLHPSAKGKRVRFSGS CEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCEEEECCC ARSVIDGPFAQTGELVAGFWLWKVASMDEAVEWVKRCPNPMESDSEIEIRPLYELEDFGD CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHCCC AFTPELREREARLRDEIDEQGKKAP CCCHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA