| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53722292
Identifier: 53722292
GI number: 53722292
Start: 1734147
End: 1734950
Strand: Reverse
Name: 53722292
Synonym: BPSS1270
Alternate gene names: NA
Gene position: 1734950-1734147 (Counterclockwise)
Preceding gene: 53722293
Following gene: 53722291
Centisome position: 54.68
GC content: 66.54
Gene sequence:
>804_bases ATGCACAGAATCGAAGAGGAACCGTTTTCGGCCGAATCGCGTGCGGAACCGGACGCCGGCGCCGCGTTGCGCGCGCTGGG CTGGATGATGTTCGGCATGGAGGATCTGAGGCTTTGCGCCGACGAGCGGCGCGAACTGGCTCAACTGGCCCGCTATGCGC AGACCTTGCCGATCGACGGATTCGGCGGCAACGGCCGGCACCGCTGCTACGCGGAAGCCGTGCTGAGCCCGTCGGCGCGA ACCTTGCGCTGGAAGCCCGGCATTGTCGGAAAGGACGGCACGATCGAAGTCGAATATGAACAGGAGACCGAATTTCAGCC CGAGTACGGCGGCGTGCGCCGGCGTTTCGCGCGCGCGAGCGATCGCGTGCTGCAATCGTCGCTGATCCGCAAGCTGATCT GGTTCGACTTCGATCTGATCGGCTGGGCGGGCGCGTCCGAGCCGCTTCAGTGCGGATTTCATCTCGTGCGGTTGCAGGCG CTGCCCGGCAAGCCGTCGCGCAGCACGCCCGACTGCCTGCATCGCGACGGCCAGCCGTATACGGCCGTTCATCTGGTGAG CCGCCACGACGTGACGGGCGGGCTCAACTACATCGCGCCGCCTCGATACTCGGGCCGCAATGTCGACGAGTTGCCGGCCG ACGCGCTGACCACGTTCACGCTGACCGAGCCGCTCGACAGCTACATCGTCGACGACGCGGCCGTCTGCCATCACGTGAGC GCCGTCGGCTGCGCGCCGGGCGCGGCGTCAGGCTCGCGCACCGTCATGCTGATCGATTTTTCGCCGATTCCGCTGTCGTC ATAG
Upstream 100 bases:
>100_bases CGCCGAGCAGCTCGGCATGAAATCAGGAATACGTATCGACAGGCGCGAGTCTTTCGATGATCGAACGAATGTTCACGGAT TTTCAGTTCGGGATGACAGC
Downstream 100 bases:
>100_bases GGCGCCGCCGAAGTCTTCCTCTTTCCTGACCGAACCGGGAAATCACACCATGAATCATCGTTTGCCCCACGTCGAGCGCG GCGACGCCGACGAACCGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MHRIEEEPFSAESRAEPDAGAALRALGWMMFGMEDLRLCADERRELAQLARYAQTLPIDGFGGNGRHRCYAEAVLSPSAR TLRWKPGIVGKDGTIEVEYEQETEFQPEYGGVRRRFARASDRVLQSSLIRKLIWFDFDLIGWAGASEPLQCGFHLVRLQA LPGKPSRSTPDCLHRDGQPYTAVHLVSRHDVTGGLNYIAPPRYSGRNVDELPADALTTFTLTEPLDSYIVDDAAVCHHVS AVGCAPGAASGSRTVMLIDFSPIPLSS
Sequences:
>Translated_267_residues MHRIEEEPFSAESRAEPDAGAALRALGWMMFGMEDLRLCADERRELAQLARYAQTLPIDGFGGNGRHRCYAEAVLSPSAR TLRWKPGIVGKDGTIEVEYEQETEFQPEYGGVRRRFARASDRVLQSSLIRKLIWFDFDLIGWAGASEPLQCGFHLVRLQA LPGKPSRSTPDCLHRDGQPYTAVHLVSRHDVTGGLNYIAPPRYSGRNVDELPADALTTFTLTEPLDSYIVDDAAVCHHVS AVGCAPGAASGSRTVMLIDFSPIPLSS >Mature_267_residues MHRIEEEPFSAESRAEPDAGAALRALGWMMFGMEDLRLCADERRELAQLARYAQTLPIDGFGGNGRHRCYAEAVLSPSAR TLRWKPGIVGKDGTIEVEYEQETEFQPEYGGVRRRFARASDRVLQSSLIRKLIWFDFDLIGWAGASEPLQCGFHLVRLQA LPGKPSRSTPDCLHRDGQPYTAVHLVSRHDVTGGLNYIAPPRYSGRNVDELPADALTTFTLTEPLDSYIVDDAAVCHHVS AVGCAPGAASGSRTVMLIDFSPIPLSS
Specific function: Unknown
COG id: COG4340
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29414; Mature: 29414
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRIEEEPFSAESRAEPDAGAALRALGWMMFGMEDLRLCADERRELAQLARYAQTLPIDG CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCC FGGNGRHRCYAEAVLSPSARTLRWKPGIVGKDGTIEVEYEQETEFQPEYGGVRRRFARAS CCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHH DRVLQSSLIRKLIWFDFDLIGWAGASEPLQCGFHLVRLQALPGKPSRSTPDCLHRDGQPY HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCEEEEEEEECCCCCCCCCCHHHHCCCCCE TAVHLVSRHDVTGGLNYIAPPRYSGRNVDELPADALTTFTLTEPLDSYIVDDAAVCHHVS EEEEEEECCCCCCCCCCCCCCCCCCCCHHHCCHHHHEEEEEHHHHHHHHHHHHHHHHHHH AVGCAPGAASGSRTVMLIDFSPIPLSS HHCCCCCCCCCCCEEEEEECCCCCCCC >Mature Secondary Structure MHRIEEEPFSAESRAEPDAGAALRALGWMMFGMEDLRLCADERRELAQLARYAQTLPIDG CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCC FGGNGRHRCYAEAVLSPSARTLRWKPGIVGKDGTIEVEYEQETEFQPEYGGVRRRFARAS CCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHH DRVLQSSLIRKLIWFDFDLIGWAGASEPLQCGFHLVRLQALPGKPSRSTPDCLHRDGQPY HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCEEEEEEEECCCCCCCCCCHHHHCCCCCE TAVHLVSRHDVTGGLNYIAPPRYSGRNVDELPADALTTFTLTEPLDSYIVDDAAVCHHVS EEEEEEECCCCCCCCCCCCCCCCCCCCHHHCCHHHHEEEEEHHHHHHHHHHHHHHHHHHH AVGCAPGAASGSRTVMLIDFSPIPLSS HHCCCCCCCCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA