| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53722234
Identifier: 53722234
GI number: 53722234
Start: 1632033
End: 1633571
Strand: Reverse
Name: 53722234
Synonym: BPSS1211
Alternate gene names: NA
Gene position: 1633571-1632033 (Counterclockwise)
Preceding gene: 53722235
Following gene: 53722233
Centisome position: 51.48
GC content: 60.75
Gene sequence:
>1539_bases ATGGTGGGTAGCATTCGGAACGGTATGCTAGTTGCGGCGGGTGTTGCCATCGCAGCTTTCGTGGCGAGCTTTGTGTGGCT TAAGCGCGCACCTGTCGAACCGCCGCACGCGGCCGCGAGTTCAACATCGGCTTCGCCGGTATTGCCTGCTGCAGCAACGC ACGGCAATAACGGCGCACCGGCACTGCTCGCTCAAACAGGCGAGAAGTTTGTCTTGGAAGTCCGTGGTTTGGGCCTCGTT ACAGGGCGAAACGCGAATGACGAAATCTGGAATGCAATCGAAGCCAAGGCGGACAATCACTCAACCTACATGTCGCAAAA CCCCGCCGACTATCCAGACAGCGAGGATAGCCGGATGACTTACCTAGGGGTTGGGACGGGGCTGAGCTTCCAATTGGCCG CCCATCATTCCGTCGGTTATTGGCCGGTTCCGGTCTTCATTTGGGAGCCGCCGAAGGCCTTGCACGTTAGTCGGCCAGCC AACGAGCTTTCTGGTATTCGGCAGGAGGCAAGCCTTGGTGTGACGCTTCTGTTATGGCAACAGGACGCGAACACCGACGA CGGTGCCAGCATCATTACGGAGCTGTTCACATTCTTCGAGGCACACCCTGACGTACCGGAGGCCGTAATCTATACACTGG ACGGCTCGATGAAGCGGTGGCTGAAAGACACTCCTGGCTACGCCGACACTTTCGGGCAAAGCAACATCCCGACAATGCCG GATAGCATGGTCACGCTGCTCGTGTCCCGATCGGATCGCGTCGACCGTCTGATTCGCCCCTACGCCGTCGAGCAGACGGA AAACGTCGACAAGAACACGACCGAATACGACATTACCAAGCTGTGGAACTTCTTCTGGGAGAAGAACAACGGAGAAGGGC CCGGCAGCTTTGAAGCGTACTATCAAGAGCAGCAGAAGACGGCGGGCATCCAGCCGCGCGCTTTTCTCGGTTTCATGTCT GCGCAATGGTGGCAGACACAACTCCCCGCTTTCTGGAAAACGATCAGCAACAAAGGCCCGGGCGAGTTCAAACCCACGCC GTACATCCCCGTGCGCTGGACGACCTGGCAGGTGAGGCAATTCGACAACGCGCCGCTGCTCGGCTACCTGCATCGGCCCA TCGACGTGAAGCTCGCCGATGCGCACGGCAAGCCGCTGAAGACCGCGCAGCAGGCGCAAGCGCTCAAGGCGGGGTGGCAG CAAGCCGTCGATACGCTGCCCACCGGCGAAACGCCGAAGCGGATCTTCTATGACACGACGGGCGATCGCGCGTGGGTCGC GCCGATCAACCAGGCGCTCGCGCAAAGCGGGCCGTCCGCGCCGAGTCTCGATGACGTGAAGGAAGGCTACGACATCGGCC GCCGGATCGGGAACACGGGCATCAGCTCGCCGTTGGTGCAAATCGGACTGGGCCTGATCGCGAGCTACCACGAAGGCGGG GCCAGCGCCACGATCCATCGCCGGCCGAACGGCACGGCGACGATCGTGATGGTGAGCCCGCCGACGCATAAGCAGCCTGA CGTCAATCCGTTCCGGTAA
Upstream 100 bases:
>100_bases GTTCGCGGCTATATTCGTATTGATCGCGTTGGGTTGGACGTTCATCGTGATGGCGCGGCATTATCACTATTGGCAAGCAA CGGGACAGGAGATGCCGGGC
Downstream 100 bases:
>100_bases GGAGCCCGTATGCGCGGCGTGATTCGCATCGGTGATTCGACCTCGCACGGCGGCCGCGTCGAAACGGGCCGCGAAGGCTC GACCGTGATGGGGCGGGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 512; Mature: 512
Protein sequence:
>512_residues MVGSIRNGMLVAAGVAIAAFVASFVWLKRAPVEPPHAAASSTSASPVLPAAATHGNNGAPALLAQTGEKFVLEVRGLGLV TGRNANDEIWNAIEAKADNHSTYMSQNPADYPDSEDSRMTYLGVGTGLSFQLAAHHSVGYWPVPVFIWEPPKALHVSRPA NELSGIRQEASLGVTLLLWQQDANTDDGASIITELFTFFEAHPDVPEAVIYTLDGSMKRWLKDTPGYADTFGQSNIPTMP DSMVTLLVSRSDRVDRLIRPYAVEQTENVDKNTTEYDITKLWNFFWEKNNGEGPGSFEAYYQEQQKTAGIQPRAFLGFMS AQWWQTQLPAFWKTISNKGPGEFKPTPYIPVRWTTWQVRQFDNAPLLGYLHRPIDVKLADAHGKPLKTAQQAQALKAGWQ QAVDTLPTGETPKRIFYDTTGDRAWVAPINQALAQSGPSAPSLDDVKEGYDIGRRIGNTGISSPLVQIGLGLIASYHEGG ASATIHRRPNGTATIVMVSPPTHKQPDVNPFR
Sequences:
>Translated_512_residues MVGSIRNGMLVAAGVAIAAFVASFVWLKRAPVEPPHAAASSTSASPVLPAAATHGNNGAPALLAQTGEKFVLEVRGLGLV TGRNANDEIWNAIEAKADNHSTYMSQNPADYPDSEDSRMTYLGVGTGLSFQLAAHHSVGYWPVPVFIWEPPKALHVSRPA NELSGIRQEASLGVTLLLWQQDANTDDGASIITELFTFFEAHPDVPEAVIYTLDGSMKRWLKDTPGYADTFGQSNIPTMP DSMVTLLVSRSDRVDRLIRPYAVEQTENVDKNTTEYDITKLWNFFWEKNNGEGPGSFEAYYQEQQKTAGIQPRAFLGFMS AQWWQTQLPAFWKTISNKGPGEFKPTPYIPVRWTTWQVRQFDNAPLLGYLHRPIDVKLADAHGKPLKTAQQAQALKAGWQ QAVDTLPTGETPKRIFYDTTGDRAWVAPINQALAQSGPSAPSLDDVKEGYDIGRRIGNTGISSPLVQIGLGLIASYHEGG ASATIHRRPNGTATIVMVSPPTHKQPDVNPFR >Mature_512_residues MVGSIRNGMLVAAGVAIAAFVASFVWLKRAPVEPPHAAASSTSASPVLPAAATHGNNGAPALLAQTGEKFVLEVRGLGLV TGRNANDEIWNAIEAKADNHSTYMSQNPADYPDSEDSRMTYLGVGTGLSFQLAAHHSVGYWPVPVFIWEPPKALHVSRPA NELSGIRQEASLGVTLLLWQQDANTDDGASIITELFTFFEAHPDVPEAVIYTLDGSMKRWLKDTPGYADTFGQSNIPTMP DSMVTLLVSRSDRVDRLIRPYAVEQTENVDKNTTEYDITKLWNFFWEKNNGEGPGSFEAYYQEQQKTAGIQPRAFLGFMS AQWWQTQLPAFWKTISNKGPGEFKPTPYIPVRWTTWQVRQFDNAPLLGYLHRPIDVKLADAHGKPLKTAQQAQALKAGWQ QAVDTLPTGETPKRIFYDTTGDRAWVAPINQALAQSGPSAPSLDDVKEGYDIGRRIGNTGISSPLVQIGLGLIASYHEGG ASATIHRRPNGTATIVMVSPPTHKQPDVNPFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56017; Mature: 56017
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGSIRNGMLVAAGVAIAAFVASFVWLKRAPVEPPHAAASSTSASPVLPAAATHGNNGAP CCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ALLAQTGEKFVLEVRGLGLVTGRNANDEIWNAIEAKADNHSTYMSQNPADYPDSEDSRMT CCEECCCCEEEEEEECCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEE YLGVGTGLSFQLAAHHSVGYWPVPVFIWEPPKALHVSRPANELSGIRQEASLGVTLLLWQ EEEECCCCEEEEEECCCCCEEEEEEEEECCCCCEEECCCHHHHHHHHHHHCCCEEEEEEE QDANTDDGASIITELFTFFEAHPDVPEAVIYTLDGSMKRWLKDTPGYADTFGQSNIPTMP CCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHCCCCHHHHCCCCCCCCCC DSMVTLLVSRSDRVDRLIRPYAVEQTENVDKNTTEYDITKLWNFFWEKNNGEGPGSFEAY HHHHHHHHHCCHHHHHHHCCHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHH YQEQQKTAGIQPRAFLGFMSAQWWQTQLPAFWKTISNKGPGEFKPTPYIPVRWTTWQVRQ HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECEEEEEE FDNAPLLGYLHRPIDVKLADAHGKPLKTAQQAQALKAGWQQAVDTLPTGETPKRIFYDTT CCCCCEEHEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC GDRAWVAPINQALAQSGPSAPSLDDVKEGYDIGRRIGNTGISSPLVQIGLGLIASYHEGG CCEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCC ASATIHRRPNGTATIVMVSPPTHKQPDVNPFR CCEEEEECCCCCEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure MVGSIRNGMLVAAGVAIAAFVASFVWLKRAPVEPPHAAASSTSASPVLPAAATHGNNGAP CCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ALLAQTGEKFVLEVRGLGLVTGRNANDEIWNAIEAKADNHSTYMSQNPADYPDSEDSRMT CCEECCCCEEEEEEECCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEE YLGVGTGLSFQLAAHHSVGYWPVPVFIWEPPKALHVSRPANELSGIRQEASLGVTLLLWQ EEEECCCCEEEEEECCCCCEEEEEEEEECCCCCEEECCCHHHHHHHHHHHCCCEEEEEEE QDANTDDGASIITELFTFFEAHPDVPEAVIYTLDGSMKRWLKDTPGYADTFGQSNIPTMP CCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHCCCCHHHHCCCCCCCCCC DSMVTLLVSRSDRVDRLIRPYAVEQTENVDKNTTEYDITKLWNFFWEKNNGEGPGSFEAY HHHHHHHHHCCHHHHHHHCCHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHH YQEQQKTAGIQPRAFLGFMSAQWWQTQLPAFWKTISNKGPGEFKPTPYIPVRWTTWQVRQ HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECEEEEEE FDNAPLLGYLHRPIDVKLADAHGKPLKTAQQAQALKAGWQQAVDTLPTGETPKRIFYDTT CCCCCEEHEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC GDRAWVAPINQALAQSGPSAPSLDDVKEGYDIGRRIGNTGISSPLVQIGLGLIASYHEGG CCEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCC ASATIHRRPNGTATIVMVSPPTHKQPDVNPFR CCEEEEECCCCCEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA