| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53722066
Identifier: 53722066
GI number: 53722066
Start: 1424960
End: 1425448
Strand: Reverse
Name: 53722066
Synonym: BPSS1045
Alternate gene names: NA
Gene position: 1425448-1424960 (Counterclockwise)
Preceding gene: 53722068
Following gene: 53722065
Centisome position: 44.92
GC content: 64.21
Gene sequence:
>489_bases ATGCTGCAATTGCTGAGCGTTGCAATCGACAAGCCCGACACGGCGAACTTCATTCTCGGCCAGACGCATTTCATCAAATC GGTCGAGGACATCCACGAGGCGCTCGTCGGCGCCGTGCCCGGCATCCGTTTCGGCCTCGCGTTCTGCGAGGCGTCCGGCA AGCGCCTCGTGCGCCATTCCGGCACCGGCGCCGCGCTGACCGAGCTCGCTTGCCGCAACGCCCTCGCGATCGGCGCCGGC CACTGTTTTCTCGTCTTTCTCGGCGACGGCTTTTATCCGCTCAACGTGCTGAACGCGATCAAGGCAGTGCCCGAGGTCTG CCGGATTTTCTGCGCGACCGCCAATCCGACCGAGGTCGTCGTCGCGCAGTCCGAACAGGGACGAAGCATTCTCGGCGTCG TCGACGGCTTCTCGCCGCTCGGCATCGAAACCGACGAGGACGTGCGCTGGCGCAAGGATCTGCTGCGCAATATCGGCTAC AAGGCGTAG
Upstream 100 bases:
>100_bases AACGAACCGGAACAAAACGCGCCGGCGCGCGATTGCCCCGCGGCGCCCGCCGCGCCGCGCCGGCGCGTGCGCGTCATCAC AAGACGAGACGAGGTGCGAC
Downstream 100 bases:
>100_bases CCGCCGCGCGTCGCCCGTCGCCCGTCGCCGCGTCGTCACGTCTTGCGCCGGATCGCGCGGAGATTGCCCGAATCGGGCAC GCTTGCGTGCTTGCGTGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MLQLLSVAIDKPDTANFILGQTHFIKSVEDIHEALVGAVPGIRFGLAFCEASGKRLVRHSGTGAALTELACRNALAIGAG HCFLVFLGDGFYPLNVLNAIKAVPEVCRIFCATANPTEVVVAQSEQGRSILGVVDGFSPLGIETDEDVRWRKDLLRNIGY KA
Sequences:
>Translated_162_residues MLQLLSVAIDKPDTANFILGQTHFIKSVEDIHEALVGAVPGIRFGLAFCEASGKRLVRHSGTGAALTELACRNALAIGAG HCFLVFLGDGFYPLNVLNAIKAVPEVCRIFCATANPTEVVVAQSEQGRSILGVVDGFSPLGIETDEDVRWRKDLLRNIGY KA >Mature_162_residues MLQLLSVAIDKPDTANFILGQTHFIKSVEDIHEALVGAVPGIRFGLAFCEASGKRLVRHSGTGAALTELACRNALAIGAG HCFLVFLGDGFYPLNVLNAIKAVPEVCRIFCATANPTEVVVAQSEQGRSILGVVDGFSPLGIETDEDVRWRKDLLRNIGY KA
Specific function: Unknown
COG id: COG1839
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17366; Mature: 17366
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQLLSVAIDKPDTANFILGQTHFIKSVEDIHEALVGAVPGIRFGLAFCEASGKRLVRHS CCCEEEECCCCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEHCC GTGAALTELACRNALAIGAGHCFLVFLGDGFYPLNVLNAIKAVPEVCRIFCATANPTEVV CCCHHHHHHHHHHHHEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEE VAQSEQGRSILGVVDGFSPLGIETDEDVRWRKDLLRNIGYKA EEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MLQLLSVAIDKPDTANFILGQTHFIKSVEDIHEALVGAVPGIRFGLAFCEASGKRLVRHS CCCEEEECCCCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEHCC GTGAALTELACRNALAIGAGHCFLVFLGDGFYPLNVLNAIKAVPEVCRIFCATANPTEVV CCCHHHHHHHHHHHHEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEE VAQSEQGRSILGVVDGFSPLGIETDEDVRWRKDLLRNIGYKA EEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA