Click here to switch to the map view.

The map label for this gene is ydaH [H]

Identifier: 53722003

GI number: 53722003

Start: 1298505

End: 1299308

Strand: Reverse

Name: ydaH [H]

Synonym: BPSS0980

Alternate gene names: 53722003

Gene position: 1299308-1298505 (Counterclockwise)

Preceding gene: 53722007

Following gene: 53721997

Centisome position: 40.95

GC content: 63.31

Gene sequence:

>804_bases
ATGGATACACAGCTCTGGATCATCTGCGGCCTGACGTTCGTCATTCACGTCATCGCCACGTTGGCTTATGCCGTGCGAAT
TGCAGGCGTTCGCACGCGCCGTATCGCCGTGTCGTTTTCCCTGTTCGGCATCATCGCGCTGGTGTCCAGGACAGCCAATT
CCTTTCAGGGGCCATTCATCGCGAAGCGGGTCGAGCTGGATATCTCTCGACACCTCGGCGAGGGTTTGCTCGCCGATTTC
AGACTCTTCCTGCTGAGCGCCACGGTCGCGAGCGTGGTCGGAGCGCTGCTGATTCCGACGTTTCAGCGTTATTTCAGCCG
CGCGGTGCATCACTTCCAGGCGAACCGTTCGGTTTCCCGCCTGCTGCTTCGCGTCTTCAGCCGCGACGGCGTCGGCTACA
TCCGGGGCGGCGCGCGGCTGCCCTCCCCGCGCAACGTCACCCAGCTGGCGACAGGCACGGGCGTTTCCTGGCAAGTGATC
GTGCTGAACGTCGTCGCGATGGCGATCTGGACGGTCGGCGTCTTCGCGTCCCTTTACGCCGGCTACCTGAAACCGGAACT
GAGGGTGACATGCGCGAACCTGTCGTCGATCATCAACGGATTCGCGACGGTGGCGATGGCGGTCATCATCGATCCGCAGG
TATCGGTGATGACCGACGACGTAATCGAGGGCCGCCTTTGCGAAAATCACTTCCGCCGCGCGATCACGACGCTGGCGGGC
GCACGGGTGCTCGGCACCCTGTGCGCGCAAGCCGCGCTCGTTCCCGCAGCGCTCGTCATTGTCCGCGTCGCCGAGCTCAT
CTAG

Upstream 100 bases:

>100_bases
GCGGAACACGGCACGCACGCGCGGGATCGAATCGCCGCGCCGCACGGATCGACGGCGCACTCCTGTACACTCGGCCCTTC
GGCCCACTCGCTGCAGCGGC

Downstream 100 bases:

>100_bases
CGCGCGCGTCGACCGGCCGCGGCCGCCCGGCGCCGGCGTTCGATGCAATCGACGCGCGGCCGCCCGGGCGTTTGCGCCCT
TGCGCCTGCGCGCGAACGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MDTQLWIICGLTFVIHVIATLAYAVRIAGVRTRRIAVSFSLFGIIALVSRTANSFQGPFIAKRVELDISRHLGEGLLADF
RLFLLSATVASVVGALLIPTFQRYFSRAVHHFQANRSVSRLLLRVFSRDGVGYIRGGARLPSPRNVTQLATGTGVSWQVI
VLNVVAMAIWTVGVFASLYAGYLKPELRVTCANLSSIINGFATVAMAVIIDPQVSVMTDDVIEGRLCENHFRRAITTLAG
ARVLGTLCAQAALVPAALVIVRVAELI

Sequences:

>Translated_267_residues
MDTQLWIICGLTFVIHVIATLAYAVRIAGVRTRRIAVSFSLFGIIALVSRTANSFQGPFIAKRVELDISRHLGEGLLADF
RLFLLSATVASVVGALLIPTFQRYFSRAVHHFQANRSVSRLLLRVFSRDGVGYIRGGARLPSPRNVTQLATGTGVSWQVI
VLNVVAMAIWTVGVFASLYAGYLKPELRVTCANLSSIINGFATVAMAVIIDPQVSVMTDDVIEGRLCENHFRRAITTLAG
ARVLGTLCAQAALVPAALVIVRVAELI
>Mature_267_residues
MDTQLWIICGLTFVIHVIATLAYAVRIAGVRTRRIAVSFSLFGIIALVSRTANSFQGPFIAKRVELDISRHLGEGLLADF
RLFLLSATVASVVGALLIPTFQRYFSRAVHHFQANRSVSRLLLRVFSRDGVGYIRGGARLPSPRNVTQLATGTGVSWQVI
VLNVVAMAIWTVGVFASLYAGYLKPELRVTCANLSSIINGFATVAMAVIIDPQVSVMTDDVIEGRLCENHFRRAITTLAG
ARVLGTLCAQAALVPAALVIVRVAELI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021260 [H]

Pfam domain/function: PF10997 DUF2837 [H]

EC number: NA

Molecular weight: Translated: 28907; Mature: 28907

Theoretical pI: Translated: 11.16; Mature: 11.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTQLWIICGLTFVIHVIATLAYAVRIAGVRTRRIAVSFSLFGIIALVSRTANSFQGPFI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
AKRVELDISRHLGEGLLADFRLFLLSATVASVVGALLIPTFQRYFSRAVHHFQANRSVSR
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
LLLRVFSRDGVGYIRGGARLPSPRNVTQLATGTGVSWQVIVLNVVAMAIWTVGVFASLYA
HHHHHHHCCCCEEEECCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GYLKPELRVTCANLSSIINGFATVAMAVIIDPQVSVMTDDVIEGRLCENHFRRAITTLAG
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARVLGTLCAQAALVPAALVIVRVAELI
HHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MDTQLWIICGLTFVIHVIATLAYAVRIAGVRTRRIAVSFSLFGIIALVSRTANSFQGPFI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
AKRVELDISRHLGEGLLADFRLFLLSATVASVVGALLIPTFQRYFSRAVHHFQANRSVSR
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
LLLRVFSRDGVGYIRGGARLPSPRNVTQLATGTGVSWQVIVLNVVAMAIWTVGVFASLYA
HHHHHHHCCCCEEEECCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GYLKPELRVTCANLSSIINGFATVAMAVIIDPQVSVMTDDVIEGRLCENHFRRAITTLAG
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARVLGTLCAQAALVPAALVIVRVAELI
HHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]