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The map label for this gene is oppD [H]

Identifier: 53721974

GI number: 53721974

Start: 1252715

End: 1253584

Strand: Reverse

Name: oppD [H]

Synonym: BPSS0951

Alternate gene names: 53721974

Gene position: 1253584-1252715 (Counterclockwise)

Preceding gene: 53721975

Following gene: 53721973

Centisome position: 39.51

GC content: 72.99

Gene sequence:

>870_bases
ATGCCCGCATCCTCCGTTTCCCCGAACACGCCGCCGCTCGCCGAGATCGAAGGGCTGCGCATCGGCTTTCGCACGCACGA
CGGCGCGCTCGTCGAGGCCGTGCGCGACCTGTCGCTCACGCTCGCGCCGGGCGAGCGGCTCGGCATCGTCGGCGAATCCG
GCTCCGGCAAGTCGCTGACGGGCCGCGCGCTGCTCGGCCTGCTGCCCGCCGCCGCGCAATGGCACGCGCGCGCGCTGCGC
TTCGAAGGCCGCGACCTGCTCGCGCTCGGCGCGCGCGAGCGGCGCAGGCTGTGCGGCGGCGCGATGGGGATGATCCTTCA
GGATCCCAAATATTCGCTGAATCCGGTCATGACGGTCGCCACGCAGATGGCCGAGGCGTTCCGGCTGCGCGAGCCCGGGC
TGCGCGGCCGCGCGCTGCGCGAGCGGATCGTCGACGCGCTCGCATCGGTCGAGATCCGCGATCCGGCGCGCGTCGCCGAC
GCGTATCCGCACGAGCTCTCGGGCGGGATGGGCCAGCGCGTGATGATCGCGATGATGGTATCGACGGGGCCGCGCCTGCT
TGTCGCCGACGAGCCGACGTCCGCGCTCGACGTCGCGGTGTCGATGCAGGTGCTCGCGGTGCTCGACGACATGATCGCGC
GCCACCGCACGGGCCTCCTGTTCATCAGCCACGATCTGCCGCTCGTCACGTCGTTCTGCGATCGCGTCGCGGTGATGTAC
GCGGGGCGCGTCGTCGAGACGTGCGCGGCGCGCGACCTCGTCCACGCGGCGCATCCGTACACGCGCGGCCTGCTCGCCGC
GACGCCGCCGCTCGCGAACCCGCCCGACGCGCTGCCGGTGCTCGAGCGCGATCCGGCATGGCTCACGTAG

Upstream 100 bases:

>100_bases
GCGACGCTGCCCGGCGCGGCGATCCTCGTCGTCAGCATCGCGTTCAACCTGCTCGGCGACGGTCTGCGCGACGTCTTCGA
TCCACGCCATGGAGCCTGAC

Downstream 100 bases:

>100_bases
GCCGCACGATGAGCGACGCACCGATGATCGACATCCGCGACGTATCGATCCGGTTCCCGACCCGCGGCGGCCACGTCGAC
GCGGTGCGCGGCGCGAGCCT

Product: ABC transporter system, ATP-binding protein

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: Stage 0 sporulation protein KD [H]

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MPASSVSPNTPPLAEIEGLRIGFRTHDGALVEAVRDLSLTLAPGERLGIVGESGSGKSLTGRALLGLLPAAAQWHARALR
FEGRDLLALGARERRRLCGGAMGMILQDPKYSLNPVMTVATQMAEAFRLREPGLRGRALRERIVDALASVEIRDPARVAD
AYPHELSGGMGQRVMIAMMVSTGPRLLVADEPTSALDVAVSMQVLAVLDDMIARHRTGLLFISHDLPLVTSFCDRVAVMY
AGRVVETCAARDLVHAAHPYTRGLLAATPPLANPPDALPVLERDPAWLT

Sequences:

>Translated_289_residues
MPASSVSPNTPPLAEIEGLRIGFRTHDGALVEAVRDLSLTLAPGERLGIVGESGSGKSLTGRALLGLLPAAAQWHARALR
FEGRDLLALGARERRRLCGGAMGMILQDPKYSLNPVMTVATQMAEAFRLREPGLRGRALRERIVDALASVEIRDPARVAD
AYPHELSGGMGQRVMIAMMVSTGPRLLVADEPTSALDVAVSMQVLAVLDDMIARHRTGLLFISHDLPLVTSFCDRVAVMY
AGRVVETCAARDLVHAAHPYTRGLLAATPPLANPPDALPVLERDPAWLT
>Mature_288_residues
PASSVSPNTPPLAEIEGLRIGFRTHDGALVEAVRDLSLTLAPGERLGIVGESGSGKSLTGRALLGLLPAAAQWHARALRF
EGRDLLALGARERRRLCGGAMGMILQDPKYSLNPVMTVATQMAEAFRLREPGLRGRALRERIVDALASVEIRDPARVADA
YPHELSGGMGQRVMIAMMVSTGPRLLVADEPTSALDVAVSMQVLAVLDDMIARHRTGLLFISHDLPLVTSFCDRVAVMYA
GRVVETCAARDLVHAAHPYTRGLLAATPPLANPPDALPVLERDPAWLT

Specific function: Part of the binding protein-dependent transport system for oligopeptides. Probably responsible for energy coupling to the transport system. Required for sporulation and competence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI11967971, Length=251, Percent_Identity=25.8964143426295, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI1789963, Length=270, Percent_Identity=43.7037037037037, Blast_Score=214, Evalue=8e-57,
Organism=Escherichia coli, GI48994883, Length=280, Percent_Identity=44.6428571428571, Blast_Score=210, Evalue=8e-56,
Organism=Escherichia coli, GI145693107, Length=265, Percent_Identity=44.9056603773585, Blast_Score=197, Evalue=5e-52,
Organism=Escherichia coli, GI1788506, Length=281, Percent_Identity=42.7046263345196, Blast_Score=196, Evalue=2e-51,
Organism=Escherichia coli, GI1787759, Length=274, Percent_Identity=41.2408759124088, Blast_Score=196, Evalue=2e-51,
Organism=Escherichia coli, GI1787548, Length=289, Percent_Identity=37.0242214532872, Blast_Score=180, Evalue=9e-47,
Organism=Escherichia coli, GI1787500, Length=275, Percent_Identity=37.8181818181818, Blast_Score=164, Evalue=9e-42,
Organism=Escherichia coli, GI1789962, Length=249, Percent_Identity=38.1526104417671, Blast_Score=137, Evalue=6e-34,
Organism=Escherichia coli, GI1787758, Length=247, Percent_Identity=36.0323886639676, Blast_Score=133, Evalue=1e-32,
Organism=Escherichia coli, GI1789890, Length=236, Percent_Identity=36.864406779661, Blast_Score=130, Evalue=8e-32,
Organism=Escherichia coli, GI48994997, Length=252, Percent_Identity=35.3174603174603, Blast_Score=118, Evalue=4e-28,
Organism=Escherichia coli, GI1789891, Length=214, Percent_Identity=35.981308411215, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI1789032, Length=234, Percent_Identity=33.7606837606838, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1786398, Length=266, Percent_Identity=30.0751879699248, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1787547, Length=263, Percent_Identity=29.277566539924, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI87081791, Length=262, Percent_Identity=30.5343511450382, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1788761, Length=237, Percent_Identity=31.2236286919831, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1787370, Length=242, Percent_Identity=31.404958677686, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1789672, Length=243, Percent_Identity=32.5102880658436, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1789991, Length=253, Percent_Identity=26.4822134387352, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI1787105, Length=240, Percent_Identity=32.9166666666667, Blast_Score=81, Evalue=8e-17,
Organism=Escherichia coli, GI1787712, Length=239, Percent_Identity=28.8702928870293, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1790525, Length=227, Percent_Identity=26.8722466960352, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1789873, Length=219, Percent_Identity=32.4200913242009, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI1787089, Length=234, Percent_Identity=29.0598290598291, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1790467, Length=221, Percent_Identity=28.9592760180996, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1788450, Length=218, Percent_Identity=28.8990825688073, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787041, Length=236, Percent_Identity=27.5423728813559, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787029, Length=216, Percent_Identity=30.0925925925926, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1788225, Length=234, Percent_Identity=31.1965811965812, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI87082267, Length=223, Percent_Identity=28.6995515695067, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1786703, Length=248, Percent_Identity=29.4354838709677, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI48994943, Length=257, Percent_Identity=29.5719844357977, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI87081709, Length=221, Percent_Identity=25.7918552036199, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI87081834, Length=210, Percent_Identity=30.4761904761905, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1788644, Length=167, Percent_Identity=31.1377245508982, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1787792, Length=232, Percent_Identity=29.7413793103448, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1786319, Length=249, Percent_Identity=24.8995983935743, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI87081782, Length=222, Percent_Identity=28.3783783783784, Blast_Score=68, Evalue=8e-13,
Organism=Escherichia coli, GI48995001, Length=234, Percent_Identity=28.2051282051282, Blast_Score=67, Evalue=9e-13,
Organism=Escherichia coli, GI1786345, Length=217, Percent_Identity=30.4147465437788, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1790190, Length=217, Percent_Identity=25.8064516129032, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1786253, Length=218, Percent_Identity=27.9816513761468, Blast_Score=61, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI212646699, Length=232, Percent_Identity=26.7241379310345, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI25146777, Length=235, Percent_Identity=26.8085106382979, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI193202349, Length=242, Percent_Identity=26.4462809917355, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17541710, Length=243, Percent_Identity=27.1604938271605, Blast_Score=67, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6323217, Length=242, Percent_Identity=28.5123966942149, Blast_Score=63, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24641565, Length=232, Percent_Identity=29.7413793103448, Blast_Score=71, Evalue=9e-13,
Organism=Drosophila melanogaster, GI24643674, Length=213, Percent_Identity=25.8215962441315, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI85726357, Length=257, Percent_Identity=29.5719844357977, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR010066
- InterPro:   IPR013563 [H]

Pfam domain/function: PF00005 ABC_tran; PF08352 oligo_HPY [H]

EC number: NA

Molecular weight: Translated: 30968; Mature: 30837

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPASSVSPNTPPLAEIEGLRIGFRTHDGALVEAVRDLSLTLAPGERLGIVGESGSGKSLT
CCCCCCCCCCCCCHHCCCEEEEEECCCCHHHHHHHHCEEEECCCCEEEEEECCCCCCCCH
GRALLGLLPAAAQWHARALRFEGRDLLALGARERRRLCGGAMGMILQDPKYSLNPVMTVA
HHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHEECCCCCCCCHHHHHH
TQMAEAFRLREPGLRGRALRERIVDALASVEIRDPARVADAYPHELSGGMGQRVMIAMMV
HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHCCCCCCCEEEEEEE
STGPRLLVADEPTSALDVAVSMQVLAVLDDMIARHRTGLLFISHDLPLVTSFCDRVAVMY
CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHH
AGRVVETCAARDLVHAAHPYTRGLLAATPPLANPPDALPVLERDPAWLT
HHHHHHHHHHHHHHHHCCCHHCCCEECCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PASSVSPNTPPLAEIEGLRIGFRTHDGALVEAVRDLSLTLAPGERLGIVGESGSGKSLT
CCCCCCCCCCCCHHCCCEEEEEECCCCHHHHHHHHCEEEECCCCEEEEEECCCCCCCCH
GRALLGLLPAAAQWHARALRFEGRDLLALGARERRRLCGGAMGMILQDPKYSLNPVMTVA
HHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHEECCCCCCCCHHHHHH
TQMAEAFRLREPGLRGRALRERIVDALASVEIRDPARVADAYPHELSGGMGQRVMIAMMV
HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHCCCCCCCEEEEEEE
STGPRLLVADEPTSALDVAVSMQVLAVLDDMIARHRTGLLFISHDLPLVTSFCDRVAVMY
CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHH
AGRVVETCAARDLVHAAHPYTRGLLAATPPLANPPDALPVLERDPAWLT
HHHHHHHHHHHHHHHHCCCHHCCCEECCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]