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The map label for this gene is 53721951

Identifier: 53721951

GI number: 53721951

Start: 1223235

End: 1223885

Strand: Reverse

Name: 53721951

Synonym: BPSS0927

Alternate gene names: NA

Gene position: 1223885-1223235 (Counterclockwise)

Preceding gene: 53721952

Following gene: 53721950

Centisome position: 38.57

GC content: 72.66

Gene sequence:

>651_bases
ATGCTGTCCCATCTGCCCCCGCGCGTGCGCGGCCTCTGGCTTGCGGCCGCGCTCGCCGCGCTGCTGTATGGGCTGTCGCT
CGGCCACGCGCCCTATTCCGGCCAGCCCGCCGCCAAGGCGGCGCTCGGCGTTCTGTTGCTCGCCGCGGCGCTGCGGCATC
CGCTCGCGCGCGAGCGCGCATGGCTCGGCGCGGCGCTCGCCGCATCCACGCTCGGCGACGTGCTCCTCGCGCTCGCCTCG
TGGCCGCCGTCGTTCGTCGCCGGCCTCGGCGCGTTCCTGCTCGCCCATCTTGCCTATTGCGCGCTGTTCGCGCCGTGGCG
CGCGGCGCCGCGCGGGGCGCGCGCCGTCGCGCTCGGCGCGGTGTGGCTCGCCGCTCCCGCGCTCTACGCGGCGTTCCTTC
CTCACCTCGCCGCGCTCGCGGCGCCCGTCGCCGTCTATGTTGCCGTGCTCGGCGCGATGGCGAGCTTCGCGCTCTGCGCG
CGCACGCCGGGGCCGCAGGTCGCGGCCGGCGCGCTCGTGTTCGTTGCGTCCGACGCGCTAATCGGCATCGATCGTTTTCT
CGGCGCGTTTTCCGGCGTCGATTATTTCATCTGGTTTCTTTATGCGATCGCGCAATTGACGATGGCATTCGGTGTGCTGC
GGCGCAAATAA

Upstream 100 bases:

>100_bases
GCCTTCTTGCCGATAATGAACGGCCGCGCGAACGCGGTGCGTTGCCCGCGACGCGCCGCCCGCGCCCGATCACACGCCGC
GTGCGAGGAGACGTCCGCCC

Downstream 100 bases:

>100_bases
AAATAATCGAAGCCGTGCCTGTGTCCTCAACCTGTCGGCGATAAAGCAGGATTTTGCATCGCACCATCCCGATTTCATCC
CGCATCGCGCCTTGCGCTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MLSHLPPRVRGLWLAAALAALLYGLSLGHAPYSGQPAAKAALGVLLLAAALRHPLARERAWLGAALAASTLGDVLLALAS
WPPSFVAGLGAFLLAHLAYCALFAPWRAAPRGARAVALGAVWLAAPALYAAFLPHLAALAAPVAVYVAVLGAMASFALCA
RTPGPQVAAGALVFVASDALIGIDRFLGAFSGVDYFIWFLYAIAQLTMAFGVLRRK

Sequences:

>Translated_216_residues
MLSHLPPRVRGLWLAAALAALLYGLSLGHAPYSGQPAAKAALGVLLLAAALRHPLARERAWLGAALAASTLGDVLLALAS
WPPSFVAGLGAFLLAHLAYCALFAPWRAAPRGARAVALGAVWLAAPALYAAFLPHLAALAAPVAVYVAVLGAMASFALCA
RTPGPQVAAGALVFVASDALIGIDRFLGAFSGVDYFIWFLYAIAQLTMAFGVLRRK
>Mature_216_residues
MLSHLPPRVRGLWLAAALAALLYGLSLGHAPYSGQPAAKAALGVLLLAAALRHPLARERAWLGAALAASTLGDVLLALAS
WPPSFVAGLGAFLLAHLAYCALFAPWRAAPRGARAVALGAVWLAAPALYAAFLPHLAALAAPVAVYVAVLGAMASFALCA
RTPGPQVAAGALVFVASDALIGIDRFLGAFSGVDYFIWFLYAIAQLTMAFGVLRRK

Specific function: Unknown

COG id: COG3714

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TMEM86 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012506 [H]

Pfam domain/function: PF07947 YhhN [H]

EC number: NA

Molecular weight: Translated: 22278; Mature: 22278

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSHLPPRVRGLWLAAALAALLYGLSLGHAPYSGQPAAKAALGVLLLAAALRHPLARERA
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
WLGAALAASTLGDVLLALASWPPSFVAGLGAFLLAHLAYCALFAPWRAAPRGARAVALGA
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
VWLAAPALYAAFLPHLAALAAPVAVYVAVLGAMASFALCARTPGPQVAAGALVFVASDAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
IGIDRFLGAFSGVDYFIWFLYAIAQLTMAFGVLRRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLSHLPPRVRGLWLAAALAALLYGLSLGHAPYSGQPAAKAALGVLLLAAALRHPLARERA
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
WLGAALAASTLGDVLLALASWPPSFVAGLGAFLLAHLAYCALFAPWRAAPRGARAVALGA
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
VWLAAPALYAAFLPHLAALAAPVAVYVAVLGAMASFALCARTPGPQVAAGALVFVASDAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
IGIDRFLGAFSGVDYFIWFLYAIAQLTMAFGVLRRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]