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The map label for this gene is 53721942

Identifier: 53721942

GI number: 53721942

Start: 1211936

End: 1212397

Strand: Reverse

Name: 53721942

Synonym: BPSS0918

Alternate gene names: NA

Gene position: 1212397-1211936 (Counterclockwise)

Preceding gene: 53721944

Following gene: 53721938

Centisome position: 38.21

GC content: 65.58

Gene sequence:

>462_bases
ATGCCACGCGACAACCGCCTGTCCCGCATGCTCCATGTGCTGATCCATATGGATCGGCACATGGAGCGCGCCACCTCCGA
GGCGATCGCGAAGATGCTCGGAACGAACCCCGTCGTCGTGCGCCGGATGATGGCCGGGCTGCGGGACCAAGGCTACGTCC
GATCGGAAAAAGGCCATGGCGGCGGCTGGGAACTCGTCTGCGATCTGGATGCGATCACGCTGCTTGATGTCTACCGGGCC
ATCGGCGAACCGCCGCTGTTCAGCATCGGCCCCCATGCCGAGCAGTCCGACTGCCTCGTCGAGAAGGCCGTCGATGCCCG
CATGAGAGAAGCGCTGGGCGAAGCGCAGGCCTTGCTGCTCGCACGTTTCGGCGCCATCACAGTGGGCGATCTGGCGAGGG
ACTTCGACAAGCGGCACGCCCGCCACAAAGCGGGGAAACGGGGGAATTGCGCCGCGGCATAG

Upstream 100 bases:

>100_bases
AGTTACGAAAGAACGCGACGTTTGTCAAATCAAAGCACTTGCATTGTTACGTGTGCGACGCAGTGGTAGATTGCGGTGTG
ATTCGGAAAGGACCCCCACG

Downstream 100 bases:

>100_bases
CGCGCTCGCGCGCCGGATTTCGGGCAACCGGCCGGCCGAATGAATCGTCGCGCGTCGGCCGGTGCCGGCGATGGTCGGCG
CCGCGCCGAACATCGCCGGC

Product: DNA-binding protein

Products: NA

Alternate protein names: Transcriptional Regulator BadM/Rrf2 Family; Transcriptional Regulator; Rrf2 Family Protein; Rrf2 Family Transcriptional Regulator; Transcriptional Regulator Family; Transcriptional Regulator Badm/Rrf2 Family; Transcriptional Regulator Superfamily; HTH Domain-Containing; Transcriptional Regulator Rrf2 Family; Transcription Regulator Protein; HTH-Type Transcriptional Regulator YwnA; Rf2 Family Transcriptional Regulator; Transcriptional Regulator Family Protein

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MPRDNRLSRMLHVLIHMDRHMERATSEAIAKMLGTNPVVVRRMMAGLRDQGYVRSEKGHGGGWELVCDLDAITLLDVYRA
IGEPPLFSIGPHAEQSDCLVEKAVDARMREALGEAQALLLARFGAITVGDLARDFDKRHARHKAGKRGNCAAA

Sequences:

>Translated_153_residues
MPRDNRLSRMLHVLIHMDRHMERATSEAIAKMLGTNPVVVRRMMAGLRDQGYVRSEKGHGGGWELVCDLDAITLLDVYRA
IGEPPLFSIGPHAEQSDCLVEKAVDARMREALGEAQALLLARFGAITVGDLARDFDKRHARHKAGKRGNCAAA
>Mature_152_residues
PRDNRLSRMLHVLIHMDRHMERATSEAIAKMLGTNPVVVRRMMAGLRDQGYVRSEKGHGGGWELVCDLDAITLLDVYRAI
GEPPLFSIGPHAEQSDCLVEKAVDARMREALGEAQALLLARFGAITVGDLARDFDKRHARHKAGKRGNCAAA

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16897; Mature: 16766

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRDNRLSRMLHVLIHMDRHMERATSEAIAKMLGTNPVVVRRMMAGLRDQGYVRSEKGHG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEECCCCCC
GGWELVCDLDAITLLDVYRAIGEPPLFSIGPHAEQSDCLVEKAVDARMREALGEAQALLL
CCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ARFGAITVGDLARDFDKRHARHKAGKRGNCAAA
HHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PRDNRLSRMLHVLIHMDRHMERATSEAIAKMLGTNPVVVRRMMAGLRDQGYVRSEKGHG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEECCCCCC
GGWELVCDLDAITLLDVYRAIGEPPLFSIGPHAEQSDCLVEKAVDARMREALGEAQALLL
CCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ARFGAITVGDLARDFDKRHARHKAGKRGNCAAA
HHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA