| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53721934
Identifier: 53721934
GI number: 53721934
Start: 1203866
End: 1204300
Strand: Reverse
Name: 53721934
Synonym: BPSS0910
Alternate gene names: NA
Gene position: 1204300-1203866 (Counterclockwise)
Preceding gene: 53721936
Following gene: 53721917
Centisome position: 37.95
GC content: 64.14
Gene sequence:
>435_bases ATGCTCAAACTCCTGGTTCCCGTCGGTCAATCGCAGCGTTCGCTGCAGGCCGTGCGGCACGCCGCCTTTCTGTATCACGA GCGATGTGCATCCGAGGTCGTGCTCGTCAACGTGCAGCCCCCGCTCGAATCCACCCGCCTCGAAGCCTTCCACTCGCTCG CGAAGCTCCGCCAGATCGAGCATGATTTTTCGGAAGGCGAACTCGCCCAAGCCATCGGCATCCTCAAGGACGCAGACGTC AAATATTCGGTCGCGATGAAAGTCGGCCCGATCGCCGACGCGATCGCCGCGTGCGCGACCGAGAACGGCTGCGACGAGAT CGTCGTCGTCGCGCCGCGCCGCGACCCCGTCCATGCACTCACTCATTGCTTCCATCGCAGCATCCTCGATCGCCTCGTGC GCATCGCCAGCGTACCCGTCACCGCCGTGCGCTGA
Upstream 100 bases:
>100_bases GGCGTTTACGACATTTTTACGCCGCCCCCGGATTTCTTTAGACCGCACCGACGCCGACGGGACTAGCCTACCGACATCGC ATTACCGAACAGGTCTTCTC
Downstream 100 bases:
>100_bases ACCGCGCGCCGACGCTCGCCGCCATCCGCGCAGGGCCGGCTCGCGCGCCGCATGATCGCCTGCCGAGCCGATCGTGCGCG CCAAAAGCACATCGGCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: UspA Family Protein; Universal Stress Protein; UspA Domain Protein; Universal Stress Protein UspA Family; Universal Stress Protein UspA
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MLKLLVPVGQSQRSLQAVRHAAFLYHERCASEVVLVNVQPPLESTRLEAFHSLAKLRQIEHDFSEGELAQAIGILKDADV KYSVAMKVGPIADAIAACATENGCDEIVVVAPRRDPVHALTHCFHRSILDRLVRIASVPVTAVR
Sequences:
>Translated_144_residues MLKLLVPVGQSQRSLQAVRHAAFLYHERCASEVVLVNVQPPLESTRLEAFHSLAKLRQIEHDFSEGELAQAIGILKDADV KYSVAMKVGPIADAIAACATENGCDEIVVVAPRRDPVHALTHCFHRSILDRLVRIASVPVTAVR >Mature_144_residues MLKLLVPVGQSQRSLQAVRHAAFLYHERCASEVVLVNVQPPLESTRLEAFHSLAKLRQIEHDFSEGELAQAIGILKDADV KYSVAMKVGPIADAIAACATENGCDEIVVVAPRRDPVHALTHCFHRSILDRLVRIASVPVTAVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15783; Mature: 15783
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKLLVPVGQSQRSLQAVRHAAFLYHERCASEVVLVNVQPPLESTRLEAFHSLAKLRQIE CEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH HDFSEGELAQAIGILKDADVKYSVAMKVGPIADAIAACATENGCDEIVVVAPRRDPVHAL CCCCCCHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCEEEEECCCCHHHHH THCFHRSILDRLVRIASVPVTAVR HHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLKLLVPVGQSQRSLQAVRHAAFLYHERCASEVVLVNVQPPLESTRLEAFHSLAKLRQIE CEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH HDFSEGELAQAIGILKDADVKYSVAMKVGPIADAIAACATENGCDEIVVVAPRRDPVHAL CCCCCCHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCEEEEECCCCHHHHH THCFHRSILDRLVRIASVPVTAVR HHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA