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The map label for this gene is ycdI [C]

Identifier: 53721914

GI number: 53721914

Start: 1182285

End: 1182869

Strand: Reverse

Name: ycdI [C]

Synonym: BPSS0890

Alternate gene names: 53721914

Gene position: 1182869-1182285 (Counterclockwise)

Preceding gene: 53721917

Following gene: 53721913

Centisome position: 37.28

GC content: 65.64

Gene sequence:

>585_bases
ATGACTCTTTCCGATTCCGCTCTCGATCAAATTTTTCGCACCGCGCGCACCCATAACGCATGGCAGCCGAAGCCCGTCGA
CGACGCGCTGCTCCGCGAACTGATCGATCTCGTCAAGTGGGGCCCGACGTCGGCGAACTCGAGCCCCGCGCGCTTCGTGT
TCGTGAAGTCGCCCGAGGCGAAGGCCAAACTCAAGCCCGCGCTGTCCGAAGGCAATCTCGCGAAGACGATGGCCGCGCCC
GTCACCGTGATCGTCGGCATGGACATGGCGTTCCACGATCACCTGCCGAAGCTCTTCCCGCACGCGGACGCGCGCAGCTG
GTTCGCCGGCAACGACGCGCTGATCGAGGCGACCGCGTTTCGCAATGCGTCGCTGCAAGGCGCGTATCTGATCGTCGCCG
CGCGCGCGCTCGGCCTCGATGCCGGACCGATGTCGGGCTTCGATCAGGCTGCCGTCGACGCGGCGTTCTTCGCCGGCACG
TCGATCAAGTCGAACTTCCTCGTGAACCTCGGCTACGGCGACGCCGCCGGCCTGTTCCCGCGCAGCCCCCGCTTCTCGTT
CGACGAAATCGCGCGCATCGAATAA

Upstream 100 bases:

>100_bases
CGCGGAATGGCGCGAACCGCAACCGGCGATCCGCGCCGTCCTGTTCAAATTCTAGCCGCGCGAACGCCACGGCGTTTGCG
CGCTCACCCGGATTCCCGAC

Downstream 100 bases:

>100_bases
GCGCGCGACGGCGGCGCGTTCGCGCGCCGCGCCACCTCTCCCGACTTCCCCCGTTTCCGCCCATGCGACGCGTTTCATCG
TTTCTGCTGCGCCTGACGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MTLSDSALDQIFRTARTHNAWQPKPVDDALLRELIDLVKWGPTSANSSPARFVFVKSPEAKAKLKPALSEGNLAKTMAAP
VTVIVGMDMAFHDHLPKLFPHADARSWFAGNDALIEATAFRNASLQGAYLIVAARALGLDAGPMSGFDQAAVDAAFFAGT
SIKSNFLVNLGYGDAAGLFPRSPRFSFDEIARIE

Sequences:

>Translated_194_residues
MTLSDSALDQIFRTARTHNAWQPKPVDDALLRELIDLVKWGPTSANSSPARFVFVKSPEAKAKLKPALSEGNLAKTMAAP
VTVIVGMDMAFHDHLPKLFPHADARSWFAGNDALIEATAFRNASLQGAYLIVAARALGLDAGPMSGFDQAAVDAAFFAGT
SIKSNFLVNLGYGDAAGLFPRSPRFSFDEIARIE
>Mature_193_residues
TLSDSALDQIFRTARTHNAWQPKPVDDALLRELIDLVKWGPTSANSSPARFVFVKSPEAKAKLKPALSEGNLAKTMAAPV
TVIVGMDMAFHDHLPKLFPHADARSWFAGNDALIEATAFRNASLQGAYLIVAARALGLDAGPMSGFDQAAVDAAFFAGTS
IKSNFLVNLGYGDAAGLFPRSPRFSFDEIARIE

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family. HadB/RutE subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787243, Length=187, Percent_Identity=60.427807486631, Blast_Score=245, Evalue=2e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 20851; Mature: 20720

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLSDSALDQIFRTARTHNAWQPKPVDDALLRELIDLVKWGPTSANSSPARFVFVKSPEA
CCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCC
KAKLKPALSEGNLAKTMAAPVTVIVGMDMAFHDHLPKLFPHADARSWFAGNDALIEATAF
CHHCCCCCCCCCHHHHHHCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCCCEEEEEHH
RNASLQGAYLIVAARALGLDAGPMSGFDQAAVDAAFFAGTSIKSNFLVNLGYGDAAGLFP
CCCCCCCCEEEEEHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCC
RSPRFSFDEIARIE
CCCCCCHHHHHCCC
>Mature Secondary Structure 
TLSDSALDQIFRTARTHNAWQPKPVDDALLRELIDLVKWGPTSANSSPARFVFVKSPEA
CCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCC
KAKLKPALSEGNLAKTMAAPVTVIVGMDMAFHDHLPKLFPHADARSWFAGNDALIEATAF
CHHCCCCCCCCCHHHHHHCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCCCEEEEEHH
RNASLQGAYLIVAARALGLDAGPMSGFDQAAVDAAFFAGTSIKSNFLVNLGYGDAAGLFP
CCCCCCCCEEEEEHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCC
RSPRFSFDEIARIE
CCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Fmn (Potential) [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA