Click here to switch to the map view.

The map label for this gene is yhiD [C]

Identifier: 53721912

GI number: 53721912

Start: 1179628

End: 1180344

Strand: Reverse

Name: yhiD [C]

Synonym: BPSS0888

Alternate gene names: 53721912

Gene position: 1180344-1179628 (Counterclockwise)

Preceding gene: 53721913

Following gene: 53721910

Centisome position: 37.2

GC content: 65.97

Gene sequence:

>717_bases
ATGACTTTCGAATTCGCACTTCGCCTCTTCACCGCGTTCGCCTGCGGGGTCGCCATCGGCCTCGAACGGCAGATCCGCCA
GCGCACGGCCGGCTTGCGCACGATCACGCTCGTCGCGAGCGGCGCGTGTCTGTTCGTCACGCTCGGCGTGCTCACGGGCA
ACGGAATCCCCGGCGTCACGCAGATCGCCGCGTATGTCGTCTCCGGCGTCGGCTTTCTCGGCGGCGGCGTCATCATGCGA
GACAAAGGCTCGATCCAGGGCATCAACACCGCGGCCACCCTCTGGTGCTCGGCCGCGGTCGGCGTGCTCTCGGGCGCCGG
CCACTACCTGCCCGCGCTCGCGGGCACGGGCGTCGTGCTGCTCACCAACACGCTGCTGCGCGGCGTGAGCCAGGCGATCA
ACGCAACGCCCGTGTCGAACGCCGATCTCGTGCGCGAATATCAAATCACGGTGATCTGCCTCGCATCGGACGAAGTGCAC
ATCCGCACGCTGCTGTCGAACTCGATGTACGCGAAGCCGCTGTCGTTCCAGAGCCTGACGAGCGAGGACGTGCCGCGCGA
AGCCGATGCGCCCGAGCGCATCAAGGTGACGGCGACGCTGAAGCTGCACCCGAAGGATCAGCAGAAGCTCGAGCAGATCG
CGAGCCGGATGAGCATGGAGAAAAGCATCTCCAGCGTGAGCTGGACCGCGAAGGAAGCGGAACCGTTGATGGAGTGA

Upstream 100 bases:

>100_bases
TCGCGCGCTAAAGTGGCGCGCGAGTACGGAATGCACGCGCGCCCGGCAAGCGCGTGCCGCCGCGCCCATCGCGCGGCGCA
TTCGGCACGGCAGAACACCC

Downstream 100 bases:

>100_bases
GCGCCGCGCGGCCGCGACGGCGCTCGCGGCAATGCTTACGGCGCGTCGATGAGCCCCATCGCGATCGCCTTCACGACGGC
CTGCACCTTGTTCGTCGCGC

Product: MgtC family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MTFEFALRLFTAFACGVAIGLERQIRQRTAGLRTITLVASGACLFVTLGVLTGNGIPGVTQIAAYVVSGVGFLGGGVIMR
DKGSIQGINTAATLWCSAAVGVLSGAGHYLPALAGTGVVLLTNTLLRGVSQAINATPVSNADLVREYQITVICLASDEVH
IRTLLSNSMYAKPLSFQSLTSEDVPREADAPERIKVTATLKLHPKDQQKLEQIASRMSMEKSISSVSWTAKEAEPLME

Sequences:

>Translated_238_residues
MTFEFALRLFTAFACGVAIGLERQIRQRTAGLRTITLVASGACLFVTLGVLTGNGIPGVTQIAAYVVSGVGFLGGGVIMR
DKGSIQGINTAATLWCSAAVGVLSGAGHYLPALAGTGVVLLTNTLLRGVSQAINATPVSNADLVREYQITVICLASDEVH
IRTLLSNSMYAKPLSFQSLTSEDVPREADAPERIKVTATLKLHPKDQQKLEQIASRMSMEKSISSVSWTAKEAEPLME
>Mature_237_residues
TFEFALRLFTAFACGVAIGLERQIRQRTAGLRTITLVASGACLFVTLGVLTGNGIPGVTQIAAYVVSGVGFLGGGVIMRD
KGSIQGINTAATLWCSAAVGVLSGAGHYLPALAGTGVVLLTNTLLRGVSQAINATPVSNADLVREYQITVICLASDEVHI
RTLLSNSMYAKPLSFQSLTSEDVPREADAPERIKVTATLKLHPKDQQKLEQIASRMSMEKSISSVSWTAKEAEPLME

Specific function: Unknown

COG id: COG1285

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MgtC/SapB family [H]

Homologues:

Organism=Escherichia coli, GI1789924, Length=185, Percent_Identity=34.0540540540541, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003416 [H]

Pfam domain/function: PF02308 MgtC [H]

EC number: NA

Molecular weight: Translated: 25196; Mature: 25064

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFEFALRLFTAFACGVAIGLERQIRQRTAGLRTITLVASGACLFVTLGVLTGNGIPGVT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCCCCHH
QIAAYVVSGVGFLGGGVIMRDKGSIQGINTAATLWCSAAVGVLSGAGHYLPALAGTGVVL
HHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHH
LTNTLLRGVSQAINATPVSNADLVREYQITVICLASDEVHIRTLLSNSMYAKPLSFQSLT
HHHHHHHHHHHHHCCCCCCCHHHEEEEEEEEEEEECCCEEHHHHHCCCHHCCCCCHHHCC
SEDVPREADAPERIKVTATLKLHPKDQQKLEQIASRMSMEKSISSVSWTAKEAEPLME
CCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCC
>Mature Secondary Structure 
TFEFALRLFTAFACGVAIGLERQIRQRTAGLRTITLVASGACLFVTLGVLTGNGIPGVT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCCCCHH
QIAAYVVSGVGFLGGGVIMRDKGSIQGINTAATLWCSAAVGVLSGAGHYLPALAGTGVVL
HHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHH
LTNTLLRGVSQAINATPVSNADLVREYQITVICLASDEVHIRTLLSNSMYAKPLSFQSLT
HHHHHHHHHHHHHCCCCCCCHHHEEEEEEEEEEEECCCEEHHHHHCCCHHCCCCCHHHCC
SEDVPREADAPERIKVTATLKLHPKDQQKLEQIASRMSMEKSISSVSWTAKEAEPLME
CCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]