| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53721875
Identifier: 53721875
GI number: 53721875
Start: 1137775
End: 1138272
Strand: Reverse
Name: 53721875
Synonym: BPSS0848
Alternate gene names: NA
Gene position: 1138272-1137775 (Counterclockwise)
Preceding gene: 53721876
Following gene: 53721874
Centisome position: 35.87
GC content: 67.07
Gene sequence:
>498_bases ATGTCTTCGATTTCGTCCCGGCCGCATAAGCGGCCGCCCGCCTCCCCGTGGCTGTCGCTCGTCATCCGCCTGCTCGGCGT CAGTTTCGTGCTGTTCTTCGGTGCGGCGATCGTCACGATCCTGCTCGGCATCGACCATCGGGCCGCGGGCGATCCGATCG GCCTCCTGGTGCTGCGCCTCGTACGCTGGGGCGGCGTGCACGGCGGCGGCGAGCATTACGAACTGATGATCTCGACCGTT TATGTCGTCTGGGGCGCGTTTCTGTGGAAAGCCGCCGACGCTCCGTTCGAGCACGCGCTGTTTCTCGACTTCACGGTCGT CGCGAACGTCGCGCACTTCGGTTTGATGTTCGTCCAGGGGCTGACGATGCCGGGCGAGCACCTCCATCTGGTCGGCGACG TCGCGCTCGGCTGGCTCGCGCTCGCGCTCTTCGCCGCGACGTGGCTTCCCGCACGAGGCAACACGCGCAAGCGCCATACG GCGGGTGTCGACCGCTGA
Upstream 100 bases:
>100_bases ACGCGCGCGGCGCGCCTGCATGCGTCTTCCGTCGCCTCGAGCGCGCCGGCCCCGCGCCGGCGCGCTCGCCCCGAACGATC TCACCCGCACGCTGCCTGCC
Downstream 100 bases:
>100_bases ATGCCGCGGCCCGCGCGGCGCGTTGCCGGCACGGGCGAGCAACGTGCGGCACGCCGCCCGTGCCTTTGCATCCCATTCGC GCGGCTTCGGCGCGGCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MSSISSRPHKRPPASPWLSLVIRLLGVSFVLFFGAAIVTILLGIDHRAAGDPIGLLVLRLVRWGGVHGGGEHYELMISTV YVVWGAFLWKAADAPFEHALFLDFTVVANVAHFGLMFVQGLTMPGEHLHLVGDVALGWLALALFAATWLPARGNTRKRHT AGVDR
Sequences:
>Translated_165_residues MSSISSRPHKRPPASPWLSLVIRLLGVSFVLFFGAAIVTILLGIDHRAAGDPIGLLVLRLVRWGGVHGGGEHYELMISTV YVVWGAFLWKAADAPFEHALFLDFTVVANVAHFGLMFVQGLTMPGEHLHLVGDVALGWLALALFAATWLPARGNTRKRHT AGVDR >Mature_164_residues SSISSRPHKRPPASPWLSLVIRLLGVSFVLFFGAAIVTILLGIDHRAAGDPIGLLVLRLVRWGGVHGGGEHYELMISTVY VVWGAFLWKAADAPFEHALFLDFTVVANVAHFGLMFVQGLTMPGEHLHLVGDVALGWLALALFAATWLPARGNTRKRHTA GVDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17954; Mature: 17823
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: PS00211 ABC_TRANSPORTER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSISSRPHKRPPASPWLSLVIRLLGVSFVLFFGAAIVTILLGIDHRAAGDPIGLLVLRL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH VRWGGVHGGGEHYELMISTVYVVWGAFLWKAADAPFEHALFLDFTVVANVAHFGLMFVQG HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LTMPGEHLHLVGDVALGWLALALFAATWLPARGNTRKRHTAGVDR CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure SSISSRPHKRPPASPWLSLVIRLLGVSFVLFFGAAIVTILLGIDHRAAGDPIGLLVLRL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH VRWGGVHGGGEHYELMISTVYVVWGAFLWKAADAPFEHALFLDFTVVANVAHFGLMFVQG HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LTMPGEHLHLVGDVALGWLALALFAATWLPARGNTRKRHTAGVDR CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA