| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53721825
Identifier: 53721825
GI number: 53721825
Start: 1073131
End: 1073745
Strand: Reverse
Name: 53721825
Synonym: BPSS0800
Alternate gene names: NA
Gene position: 1073745-1073131 (Counterclockwise)
Preceding gene: 53721829
Following gene: 53721824
Centisome position: 33.84
GC content: 67.64
Gene sequence:
>615_bases TTGCCTACCCTCGATATCCTGACGCGGCAGTTTCCCGGCCACCGCGCGAACCTGAAGCGCACGATCCTCGCGACCGCGCT CGCGTGCTTCAACGATCACGGGCTCGAAGCGACGACGATCGAGATGATCCGCGAGCGCTGCGACACCAGCGTCGGCAACA TCTATCACCATTTCGGCAACAAGGACGGGCTGATCGCCGCGCTGTTCCTGTGCGCGCTCGAGGATCAGGCGCAACTGCTC GCCGACTACCTCGCGCGCGCGAGAACCGCGCGCGAAGGCGTCGCGGCGCTCGTCCACAGTTATGTCGATTGGGTCAGCGC GCAGCCCGAGTTCGCGCGGTTCCAGTTCATGGCGCGCACGGCGGTCGCGTCGGGGCCGCGCGCGCAAGAGCTCGCGGAAA GGAACCGCGCGCGCAACCGCCGCGTGCTCGCCTGGTTCGCGCATGCGCCGCAACGCGACGAGATGGTGCAGTGGCCCGCC GAGCTGCTGCCTTCGCTGATCGTCGGTCAATCGGAAAACTACTGCCGCGCGTGGCTGAGCGGCCGGGTCAAGGCGCCGCC CGTCAAGTATCGGGACGAACTCGCGACGGCGGCGTGGCGATCGGTTTCGAAGTAG
Upstream 100 bases:
>100_bases CGATTGAAACAGAACAATGTTCTGTTTCAGAAGATTATTCTGTTTTCTCGGCGTGCGTCAAGGTACCATTGCGCGTCCTT GTTTTCGTTCGCGACCCAGC
Downstream 100 bases:
>100_bases CCGCCGCCGACGCAGGCCCGCGCGCGTCCATCGGCCGGCGCGCATCTTCGGCTCGCCGTTTGCGGGCGCGTACCTCCGCC GGGCTCGTCCGCGAGGAAAC
Product: TetR family regulatory protein
Products: NA
Alternate protein names: TetR Family Transcriptional Regulator; Transcriptional Regulator TetR Family; Regulatory Protein TetR
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MPTLDILTRQFPGHRANLKRTILATALACFNDHGLEATTIEMIRERCDTSVGNIYHHFGNKDGLIAALFLCALEDQAQLL ADYLARARTAREGVAALVHSYVDWVSAQPEFARFQFMARTAVASGPRAQELAERNRARNRRVLAWFAHAPQRDEMVQWPA ELLPSLIVGQSENYCRAWLSGRVKAPPVKYRDELATAAWRSVSK
Sequences:
>Translated_204_residues MPTLDILTRQFPGHRANLKRTILATALACFNDHGLEATTIEMIRERCDTSVGNIYHHFGNKDGLIAALFLCALEDQAQLL ADYLARARTAREGVAALVHSYVDWVSAQPEFARFQFMARTAVASGPRAQELAERNRARNRRVLAWFAHAPQRDEMVQWPA ELLPSLIVGQSENYCRAWLSGRVKAPPVKYRDELATAAWRSVSK >Mature_203_residues PTLDILTRQFPGHRANLKRTILATALACFNDHGLEATTIEMIRERCDTSVGNIYHHFGNKDGLIAALFLCALEDQAQLLA DYLARARTAREGVAALVHSYVDWVSAQPEFARFQFMARTAVASGPRAQELAERNRARNRRVLAWFAHAPQRDEMVQWPAE LLPSLIVGQSENYCRAWLSGRVKAPPVKYRDELATAAWRSVSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22976; Mature: 22844
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTLDILTRQFPGHRANLKRTILATALACFNDHGLEATTIEMIRERCDTSVGNIYHHFGN CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHCC KDGLIAALFLCALEDQAQLLADYLARARTAREGVAALVHSYVDWVSAQPEFARFQFMART CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH AVASGPRAQELAERNRARNRRVLAWFAHAPQRDEMVQWPAELLPSLIVGQSENYCRAWLS HHHCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHC GRVKAPPVKYRDELATAAWRSVSK CCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure PTLDILTRQFPGHRANLKRTILATALACFNDHGLEATTIEMIRERCDTSVGNIYHHFGN CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHCC KDGLIAALFLCALEDQAQLLADYLARARTAREGVAALVHSYVDWVSAQPEFARFQFMART CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH AVASGPRAQELAERNRARNRRVLAWFAHAPQRDEMVQWPAELLPSLIVGQSENYCRAWLS HHHCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHC GRVKAPPVKYRDELATAAWRSVSK CCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA